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Research Note

Genetic Clarification of Auricularia heimuer Strains Bred and Cultivated in Korea Using the ITS and IGS1 rDNA Region Sequences

ORCID Icon, ORCID Icon, ORCID Icon & ORCID Icon
Pages 109-113 | Received 10 Oct 2022, Accepted 11 Jan 2023, Published online: 08 Mar 2023

References

  • Liu E, Zhang Y, Liu F, et al. Review on Auricularia auricula-judae as a functional food: growth, chemical composition, and biological activities. J Agric Food Chem. 2021;69(6):1739–1750.
  • Wu F, Yuan Y, Malysheva VF, et al. Species clarification of the most important and cultivated Auricularia mushroom "Heimuer": evidence from morphological and molecular data. Phytotaxa. 2014;186(5):241–253.
  • Wu F, Tohtirjap A, Fan L-F, et al. Global diversity and updated phylogeny of Auricularia (Auriculariales, Basidiomycota). J Fungi. 2021;7(11):933.
  • Kim KJ, Kim D, Lee SJ, et al. Characterization of a new cultivar of Auricularia auricula-judae “Yong-A”. J Mushroom. 2018;16(3):198–202.
  • Kim SH, Uzunovic A, Breuil C. Rapid detection of Ophiostoma piceae and O. quercus in stained wood by PCR. Appl Environ Microbiol. 1999;65(1):287–290.
  • Badotti F, de Oliveira FS, Garcia CF, et al. Effectiveness of ITS and sub-regions as DNA barcode markers for the identification of Basidiomycota (Fungi). BMC Microbiol. 2017;17(1):1–12.
  • Katoh K, Standley DM. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 2013;30(4):772–780.
  • Li L, Wei L, Bian Y-B, et al. Development of species-specific primers for identifying Auricularia auricula-judae using intergenic spacer 1 (IGS1) sequences. Afr J Biotechnol. 2011;10(69):15494–15500.
  • Sievers F, Wilm A, Dineen D, et al. Fast, scalable generation of high‐quality protein multiple sequence alignments using Clustal Omega. Mol Syst Biol. 2011;7(1):539.
  • Kumar S, Stecher G, Li M, et al. MEGA X: molecular evolutionary genetics analysis across computing platforms. Mol Biol Evol. 2018;35(6):1547–1549.
  • Okonechnikov K, Golosova O, Fursov M, et al. Unipro UGENE: a unified bioinformatics toolkit. Bioinformatics. 2012;28(8):1166–1167.
  • Malysheva VF, Bulakh EM. Contribution to the study of the genus Auricularia (Auriculariales, Basidiomycota) in Russia. Novosti Sistematiki Nizshikh Rastenii. 2014;48:164–180.
  • Yuan Y, Wu F, Si J, et al. Whole genome sequence of Auricularia heimuer (Basidiomycota, Fungi), the third most important cultivated mushroom worldwide. Genomics. 2019;111(1):50–58.
  • Li L, Zhong CH, Bian YB. The molecular diversity analysis of Auricularia auricula-judae in China by nuclear ribosomal DNA intergenic spacer. Electron J Biotechnol. 2014;17(1):27–33.
  • Cho SE, Kwag YN, Lee DH, et al. Current taxonomical status of Korean Auricularia species. Kor J Mycol. 2021;49(1):21–31.
  • Kwon HW, Choi MA, Yun YH, et al. Genetic and biochemical characterization of monokaryotic progeny strains of button mushroom (Agaricus bisporus). Mycobiology. 2015;43(1):81–86.