Diversity of Nigrospora (Xylariales, Apiosporaceae) Species Identified in Korean Macroalgae Including Five Unrecorded Species

References

• Zimmerman A. Ueber einige an tropischen kulturpflanzen beobachtete pilze III. Zentralblatt für bakteriologie. Parasitenkunde. 1902;8:216–221.
   Google Scholar
• Fan Y-M, Huang W-M, Li W, et al. Onychomycosis caused by Nigrospora sphaerica in an immunocompetent man. Arch Dermatol. 2009;145(5):611–612. doi: 10.1001/archdermatol.2009.80.
   PubMedGoogle Scholar
• Dutta J, Gupta S, Thakur D, et al. First report of nigrospora leaf blight on tea caused by Nigrospora sphaerica in India. Plant Disease. 2015;99(3):417–417. doi: 10.1094/PDIS-05-14-0545-PDN.
   PubMed Web of Science ®Google Scholar
• Uzor PF, Ebrahim W, Osadebe PO, et al. Metabolites from Combretum dolichopetalum and its associated endophytic fungus Nigrospora oryzae—evidence for a metabolic partnership. Fitoterapia. 2015;105:147–150. doi: 10.1016/j.fitote.2015.06.018.
   PubMed Web of Science ®Google Scholar
• Oh SY, Yang JH, Woo JJ, et al. Diversity and distribution patterns of endolichenic fungi in jeju island, South Korea. Sustainability. 2020;12(9):3769. doi: 10.3390/su12093769.
   Web of Science ®Google Scholar
• de Queiroz Brito AC, de Mello JF, de Almeida Souza AE, et al. Richness of Nigrospora spp. (Apiosporaceae) in manihot esculenta in Brazil and the description of three new species. Mycol Progress. 2023;22(6):37. doi: 10.1007/s11557-023-01887-4.
   Web of Science ®Google Scholar
• Wang M, Liu F, Crous PW, et al. Phylogenetic reassessment of Nigrospora: ubiquitous endophytes, plant and human pathogens. Persoonia. 2017;39(1):118–142. doi: 10.3767/persoonia.2017.39.06.
   PubMedGoogle Scholar
• Jothish PS, Nayar TS. Airborne fungal spores in a sawmill environment in Palakkad district, Kerala, India. Aerobiologia. 2004;20(1):75–81. doi: 10.1023/B:AERO.0000022981.70984.b7.
   Google Scholar
• Nayar TS, Jothish PS. An assessment of the air quality in indoor and outdoor air with reference to fungal spores and pollen grains in four working environments in Kerala, India. Aerobiologia. 2013;29(1):131–152. doi: 10.1007/s10453-012-9269-8.
   Web of Science ®Google Scholar
• Tripathi M, Joshi Y. Endolichenic fungi: A case study from Uttarakhand. Endolichenic fungi: present and future trends. Singapore: Springer; 2019. pp. 119–145. doi: 10.1007/978-981-13-7268-1_6.
   Google Scholar
• Lee DJ, Lee JS, Lee HB, et al. Four endophytic ascomycetes new to Korea: Cladosporium anthropophilum, C. pseudocladosporioides, Daldinia eschscholtzii, and Nigrospora chinensis. The Korean J Mycol. 2019;47(3):187–197. doi: 10.4489/KJM.20190023.
   Google Scholar
• Sun XP, Xu Y, Cao F, et al. Isoechinulin-type alkaloids from a soft coral-derived fungus Nigrospora oryzae. Chem Nat Compd. 2014;50:1153–1155. doi: 10.1007/s10600-014-1189-0.
   Web of Science ®Google Scholar
• Zhang QH, Tian L, Sun ZL, et al. Two new secondary metabolites from the marine-derived fungus Nigrospora sphaerica. J Asian Nat Prod Res. 2015;17(5):497–503. doi: 10.1080/10286020.2015.1009899.
   PubMed Web of Science ®Google Scholar
• Ukwatta KM, Lawrence JL, Wijayarathna CD. The study of antimicrobial, anti-cancer, anti-inflammatory and α-glucosidase inhibitory activities of nigronapthaphenyl, isolated from an extract of Nigrospora sphaerica. Mycology. 2019;10(4):222–228. doi: 10.1080/21501203.2019.1620892.
   PubMedGoogle Scholar
• Ola ARB, Lapailaka T, Wogo HE, et al. Bioactive secondary metabolites from the mangrove endophytic fungi Nigrospora oryzae. Indones J Chem. 2021;21(4):1016–1022. doi: 10.22146/ijc.63129.
   Web of Science ®Google Scholar
• de Felício R, Pavão GB, de Oliveira ALL, et al. Antibacterial, antifungal and cytotoxic activities exhibited by endophytic fungi from the Brazilian marine red alga Bostrychia tenella (Ceramiales). Revista Brasileira de Farmacognosia. 2015;25(6):641–650. doi: 10.1016/j.bjp.2015.08.003.
   Google Scholar
• Rajulu MG, Rajamani T, Murali TS, et al. The fungal endobiome of seaweeds of the Andaman islands, India. Curr Sci. 2022;123(12):1508–1514. doi: 10.18520/cs/v123/i12/1508-1514.
   Web of Science ®Google Scholar
• Taritla S, Kumari M, Kamat S, et al. Optimization of physicochemical parameters for production of cytotoxic secondary metabolites and apoptosis induction activities in the culture extract of a marine algal-derived endophytic fungus Aspergillus sp. Front Pharmacol. 2021;12:542891. doi: 10.3389/fphar.2021.542891.
   PubMed Web of Science ®Google Scholar
• Xu T, Song Z, Hou Y, et al. Secondary metabolites of the genus Nigrospora from terrestrial and marine habitats: chemical diversity and biological activity. Fitoterapia. 2022;161:105254. doi: 10.1016/j.fitote.2022.105254.
   PubMed Web of Science ®Google Scholar
• Dong JJ, Bao J, Zhang XY, et al. Alkaloids and citrinins from marine-derived fungus Nigrospora oryzae SCSGAF 0111. Tetrahedron Lett. 2014;55(16):2749–2753. doi: 10.1016/j.tetlet.2014.03.060.
   Web of Science ®Google Scholar
• Ding B, Yin Y, Zhang F, et al. Recovery and phylogenetic diversity of culturable fungi associated with marine sponges Clathrina luteoculcitella and Holoxea sp. in the South China Sea. Mar Biotechnol (NY). 2011;13(4):713–721. doi: 10.1007/s10126-010-9333-8.
   PubMed Web of Science ®Google Scholar
• Yao J, Shi Y, Liu Y, et al. Highly oxidized ergosterol derivatives from the fungus Nigrospora oryzae. Chem Nat Compd. 2019;55(2):390–392. doi: 10.1007/s10600-019-02700-z.
   Web of Science ®Google Scholar
• Huang DY, Nong XH, Zhang YQ, et al. Two new 2, 5-diketopiperazine derivatives from mangrove-derived endophytic fungus Nigrospora camelliae-sinensis S30. Nat Prod Res. 2022;36(14):3651–3656. doi: 10.1080/14786419.2021.1878168.
   PubMed Web of Science ®Google Scholar
• Said Hassane C, Fouillaud M, Le Goff G, et al. Microorganisms associated with the marine sponge Scopalina hapalia: a reservoir of bioactive molecules to slow down the aging process. Microorganisms. 2020;8(9):1262. doi: 10.3390/microorganisms8091262.
   PubMed Web of Science ®Google Scholar
• Hay ME. Marine chemical ecology: chemical signals and cues structure marine populations, communities, and ecosystems. Ann Rev Mar Sci. 2009;1(1):193–212. doi: 10.1146/annurev.marine.010908.163708.
   PubMedGoogle Scholar
• Krause-Jensen D, Lavery P, Serrano O, et al. Sequestration of macroalgal carbon: the elephant in the blue carbon room. Biol Lett. 2018;14(6):20180236. doi: 10.1098/rsbl.2018.0236.
   PubMed Web of Science ®Google Scholar
• Froehlich HE, Afflerbach JC, Frazier M, et al. Blue growth potential to mitigate climate change through seaweed offsetting. Curr Biol. 2019;29(18):3087–3093.e3. doi: 10.1016/j.cub.2019.07.041.
   PubMed Web of Science ®Google Scholar
• Egan S, Harder T, Burke C, et al. The seaweed holobiont: understanding seaweed–bacteria interactions. FEMS Microbiol Rev. 2013;37(3):462–476. doi: 10.1111/1574-6976.12011.
   PubMed Web of Science ®Google Scholar
• Ren CG, Liu ZY, Wang XL, et al. The seaweed holobiont: from microecology to biotechnological applications. Microb Biotechnol. 2022;15(3):738–754. doi: 10.1111/1751-7915.14014.
   PubMed Web of Science ®Google Scholar
• Kim CM, et al. The compilation inventory of national biological resources. National Institute of Biological Resources. 2011 https://www.nibr.go.kr/aiibook/ecatalog5.jsp?Dir=108&catimage=&callmode=admin
   Google Scholar
• Gardes M, Bruns TD. ITS primers with enhanced specificity for basidiomycetes‐application to the identification of mycorrhizae and rusts. Mol Ecol. 1993;2(2):113–118. doi: 10.1111/j.1365-294X.1993.tb00005.x.
   PubMed Web of Science ®Google Scholar
• White TJ, Bruns T, Lee S, et al. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, editors. PCR protocols: a guide to methods and applications. New York: Academic Press; 1990. pp. 315–322. doi: 10.1016/B978-0-12-372180-8.50042-1.
   Google Scholar
• Glass NL, Donaldson GC. Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Appl Environ Microbiol. 1995;61(4):1323–1330. doi: 10.1128/aem.61.4.1323-1330.1995.
   PubMed Web of Science ®Google Scholar
• Carbone I, Kohn LM. A method for designing primer sets for speciation studies in filamentous ascomycetes. Mycologia. 1999;91(3):553–556. doi: 10.1080/00275514.1999.12061051.
   Web of Science ®Google Scholar
• O'Donnell K, Kistler HC, Cigelnik E, et al. Multiple evolutionary origins of the fungus causing Panama disease of banana: concordant evidence from nuclear and mitochondrial gene genealogies. Proc Natl Acad Sci USA. 1998;95(5):2044–2049. doi: 10.1073/pnas.95.5.2044.
   PubMed Web of Science ®Google Scholar
• Katoh K, Rozewicki J, Yamada KD. MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Brief Bioinform. 2019;20(4):1160–1166. doi: 10.1093/bib/bbx108.
   PubMed Web of Science ®Google Scholar
• Kumar S, Stecher G, Tamura K. MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol Evol. 2016;33(7):1870–1874. doi: 10.1093/molbev/msw054.
   PubMed Web of Science ®Google Scholar
• Stamatakis A. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 2014;30(9):1312–1313. doi: 10.1093/bioinformatics/btu033.
   PubMed Web of Science ®Google Scholar
• Kornerup A, Wanscher J. Methuen handbook of colour. London: Eyre Methuen; 1978. ISBN-13: 978-0413334008
   Google Scholar
• Schneider CA, Rasband WS, Eliceiri KW. NIH image to ImageJ: 25 years of image analysis. Nat Methods. 2012;9(7):671–675. doi: 10.1038/nmeth.2089.
   PubMed Web of Science ®Google Scholar
• Tan YP, Bishop-Hurley SL, Shivas RG, et al. Fungal planet description sheets: 1436–1477. Persoonia Mol Phylogeny Evol Fungi. 2022;49:261–350. doi: 10.3767/persoonia.2022.49.08.
   Web of Science ®Google Scholar
• Chen Q, Bakhshi M, Balci Y, et al. Genera of phytopathogenic fungi: GOPHY 4. Stud Mycol. 2022;101(1):417–564. doi: 10.3114/sim.2022.101.06.
   PubMedGoogle Scholar
• Calado MDL, Silva J, Alves C, et al. Marine endophytic fungi associated with Halopteris scoparia (Linnaeus) Sauvageau as producers of bioactive secondary metabolites with potential dermocosmetic application. PLoS One. 2021;16(5):e0250954. doi: 10.1371/journal.pone.0250954.
   PubMed Web of Science ®Google Scholar
• Zhang QH, Tian L, Zhou LD, et al. Two new compounds from the marine Nigrospora sphaerica. J Asian Nat Prod Res. 2009;11(11):962–966. doi: 10.1080/10286020903339614.
   PubMed Web of Science ®Google Scholar
• Passarini MR, Santos C, Lima N, et al. Filamentous fungi from the atlantic marine sponge Dragmacidon reticulatum. Arch Microbiol. 2013;195(2):99–111. doi: 10.1007/s00203-012-0854-6.
   PubMed Web of Science ®Google Scholar
• Kornsakulkarn J, Choowong W, Rachtawee P, et al. Bioactive hydroanthraquinones from endophytic fungus Nigrospora sp. BCC 47789. Phytochem Lett. 2018;24:46–50. doi: 10.1016/j.phytol.2018.01.015.
   Web of Science ®Google Scholar
• Suwannarach N, Kumla J, Nishizaki Y, et al. Optimization and characterization of red pigment production from an endophytic fungus, Nigrospora aurantiaca CMU-ZY2045, and its potential source of natural dye for use in textile dyeing. Appl Microbiol Biotechnol. 2019;103(17):6973–6987. doi: 10.1007/s00253-019-09926-5.
   PubMed Web of Science ®Google Scholar
• Trisuwan K, Rukachaisirikul V, Sukpondma Y, et al. Pyrone derivatives from the marine-derived fungus Nigrospora sp. PSU-F18. Phytochemistry. 2009;70(4):554–557. doi: 10.1016/j.phytochem.2009.01.008.
   PubMed Web of Science ®Google Scholar
• Shang Z, Li XM, Li CS, et al. Diverse secondary metabolites produced by marine-derived fungus Nigrospora sp. MA75 on various culture media. Chem Biodivers. 2012;9(7):1338–1348. doi: 10.1002/cbdv.201100216.
   PubMed Web of Science ®Google Scholar
• Ding L, Yuan W, Peng Q, et al. Secondary metabolites isolated from the sponge-associated fungus Nigrospora oryzae. Chem Nat Compd. 2016;52(5):969–970. doi: 10.1007/s10600-016-1837-7.
   Web of Science ®Google Scholar
• Heo YM, Oh SY, Kim K, et al. Comparative genomics and transcriptomics depict marine algicolous Arthrinium species as endosymbionts that help regulate oxidative stress in brown algae. Front Mar Sci. 2021;8:753222. doi: 10.3389/fmars.2021.753222.
   Web of Science ®Google Scholar
• Vallet M, Strittmatter M, Murúa P, et al. Chemically-mediated interactions between macroalgae, their fungal endophytes, and protistan pathogens. Front Microbiol. 2018;9:3161. doi: 10.3389/fmicb.2018.03161.
   PubMed Web of Science ®Google Scholar