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Articles; Agriculture and Environmental Biotechnology

Isolation and characterization of NBS–LRR resistance gene analogues from mango

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Pages 417-424 | Received 26 Mar 2014, Accepted 22 Apr 2014, Published online: 08 Jul 2014

References

  • Timmerman-Vaughan GM, Frew TJ, Weeden NF. Characterization and linkage mapping of R-gene analogous DNA sequences in pea (Pisum sativum L.). Theor Appl Genet. 2000;101:241–247.
  • Hammond-Kosack KE, Jones JDG. Plant disease resistance genes. Annu Rev Plant Phys. 1997;48:575–607.
  • Walker JE, Saraste M, Runswick MJ, Gay NJ. Distantly related genes in the alpha and beta submits of ATP synthetase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide-binding fold. EMBO J. 1982;1:945–951.
  • Saraste M, Sibbad PR, Wittinghofer A. The P-loop-a common motif in ATP- and GTP-binding protein. Trends Biochem Sci. 1990;15:430–434.
  • Milligan SB, Bodeau J, Yaghoobi J, Kaloshian I, Zabel P, Willianmson VA. The root knot nematode resistance gene Mi from tomato is a member of the leucine zipper, nucleotide binding, leucine-rich repeat family of plant genes. Plant Cell. 1998;10:1307–1319.
  • Yoshimura S, Yamanouchi U, Katayose Y, Toki S, Wang ZX, Kono I, Kurata N, Yano M, Iwata N, Sasaki T. Expression of Xa1 a bacterial blight-resistance gene in rice is induced by bacterial inoculation. Proc Natl Acad Sci USA. 1998;95:1663–1668.
  • Tameling WIL, Elzinga SDJ, Darmin PS, Vossen JH, Takken FLW, Harling MA, Cornelissen B. The tomato R gene products I-2 and Mi-1 are functional ATP binding proteins with ATPase activity. Plant Cell. 2002;14:2929–2939.
  • Traut TW. The functions and consensus motifs of nine types of peptide segments that form different types of nucleotide binding-sites. Eur J Biochem. 1994;222:9–19.
  • Meyers BC, Dickerman AW, Michelmore RW, Sivaramakrishnan S, Sobral BW, Yong ND. Plant disease resistance genes encode members of an ancient and diverse protein family within nucleotide-binding superfamily. Plant J. 1999;20:317–332.
  • Leister D, Ballvora A, Salamini S, Gebhardt C. A PCR based approach for isolating pathogen resistance genes from potato with potential for wide application in plants. Nat Genet. 1996;14:421–429.
  • He CY, Tian AG, Zhang JS, Zhang ZY, Gai JY, Chen SY. Isolation and characterization of a full-length resistance gene homolog from soybean. Theor Appl Genet. 2003;106:786–793.
  • Collins NC, Webb CA, Seah S, Ellis JG, Hulbert SH, Pryor A. The isolation and mapping of disease resistance gene analogs in maize. Mol Plant Microbe Interaction. 1998;11:968–978.
  • Gentzbittel L, Mouzeyar S, Badaoui S Mestries E, Vear F, DE Labrouhe DT, Nicolas P. Cloning of molecular markers for disease resistance in sunflower, Helianthus annus L. Theor Appl Genet. 1998;96:519–525.
  • Shen KA, Meyers BC, Islam-Faridi MN, Chin, D, Stelly DM, Michelmore RW. Resistance gene candidates identified by PCR with degenerate oligonucleotide primers map to PCR with degenerate oligonucleotide primers map to clusters of resistance genes in lettuce. Mol Plant Microbe Interaction. 1998;11:815–823.
  • Joyeux A, Fortin MG, Mayerhofer R, Good AG. Genetic mapping of plant disease resistance gene homologues using a minimal Brassica napus L. population. Genome. 1999;42:735–743.
  • Mago R, Nair S, Mohan M. Resistance gene analogues from rice: cloning sequencing and mapping. Theor Appl Genet. 1999;99:50–57.
  • Rivkin MI, Vallejos CE, Mcclean PE. Disease-resistance related sequences in common bean. Genome. 1999;42:41–47.
  • Deng Z, Huang S, Ling P, Chen C, Yu C, Weber CA, Moore GA, Gmiter JR. Cloning and characterization of NBS-LRR class resistance-gene candidate sequences in citrus. Theor Appl Genet. 2000;101:814–822.
  • Noir S, Combes MC, Anthony F, Lashermes P. Origin diversity and evolution of NBS-type disease-resistance gene homologues in coffee trees (Coffea L.). Mol Genet Genomics. 2001;265:654–662.
  • Huettel B, Santra D, Muehlbauer F, Kahl G. Resistance gene analogues of chickpea (Cicer arietinum L.): isolation, genetic mapping and association with a Fusarium resistance gene cluster. Theor Appl Genet. 2002;105:479–490.
  • Donald TM, Pellerone F, Adam-Blondon AF, Bouquet A, Thomas MR, Dry IB. Identification of resistance gene analogs linked to a powdery mildew resistance locus in grapevine. Theor Appl Genet. 2002;104:610–618.
  • Lee SY, Seo JS, Rodriguez-Lanetty M, Lee DH. Comparative analysis of super-families of NBS-encoding disease resistance gene analogs in cultivated and wild apple species. Mol Genet Genomics. 2003;269:101–108.
  • Lacock L, Van Niekerk C, Loots S, Dupreez F, Botha AM. Functional and comparative analysis of expressed sequences from Diuraphis noxia infested wheat obtained utilizing the conserved Nucleotide Binding Site. Afr J Biotechnol. 2003;2:75–81.
  • Plocik A, Layden J, Kesseli R. Comparative analysis of NBS domain sequences of NBS-LRR disease resistance genes from sunflower, lettuce and chicory. Mol Phylogenet Evol. 2004;31:153–163.
  • Totad AS, Fakrudin B, Kuruvinahetti MS. Isolation and characterization of resistance gene analogs (RGAs) from sorghum (sorghum bicolor L. Moench). Euphytica. 2005;143:179–188.
  • Aarts MGM, Hekkert BTL, Holub EB, Beynon JL, Stiekema WJ, Pereira A. Identification of R-gene homologous DNA fragments genetically linked to disease resistance loci in Arabidopsis thaliana. Mol Plant Microbe Interaction. 1998;11:251–258.
  • Chen XM, Line RF, Leung H. Genome scanning for resistance-gene analogs in rice, barley, and wheat by high-resolution electrophoresis. Theor Appl Genet. 1998;97:345–355.
  • Mas JG, Van Leeuwen H, Monfort A, Devicente MC, Puigdome Nech P, Aru SP. Cloning and mapping of resistance gene homologues in melon. Plant Sci. 2001;161:165–172.
  • Gowda BS, Miller JL, Rubin SS, Sharma DR, Timko MP. Isolation, sequence analysis, and linkage mapping of resistance-gene analogs in cowpea (Vigna unguiculata L. Walp.). Euphytica. 2002;126:365–377.
  • Zhang LP, Khan A, Nino-Liu D, Foolad MR. A molecular linkage map of tomato displaying chromosomal locations of resistance gene analogs based on a Lycopersicon esculentum × Lycopersicon hirsutum cross. Genome. 2002;45:133–146.
  • Lopez CE, Acosta IF, Jara C, Pedraza F, Gaitan-Solis E, Gallego G, Beebe S, Tohme J. Identifying resistance gene analogs associated with resistances to different pathogens in common bean. Phytopathology. 2003;93:88–95.
  • Lanaud C, Risterucci AM, Pieretti I, N’goran JAK, Fargeas D. Characterisation and genetic mapping of resistance and defence gene analogs in cocoa (Theobroma cacao L.). Mol Breeding. 2004;13:211–227.
  • Hinchliffe DJ, Lu Y, Potenza C, Gopalan CS, Cantrell RG, Zhang J. Resistance gene analogue markers are mapped to homeologous chromosomes in cultivated tetraploid cotton. Theor Appl Genet. 2005;110:1074–1085.
  • Doyle JJ, Doyle JL. Isolation of plant genomic DNA from fresh tissue. Focus. 1990;12:13–15.
  • Wang YH, Hou XL, Shen SX, Chen XP, Wang M. Isolation and Characterization of Resistant Gene Analogs from Brassica campestris ssp. chinensis. Sci Agric Sinica. 2006;39:2621–2626.
  • Rozas J, Rozas R. DNASP 2.0: a novel software package for extensive molecular population genetic analysis. Comput Appl Biosci. 1997;13:307–311.
  • Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. Gapped Blast and PSI-BLAST: a new generation of protein database search program. Nucleic Acid Res. 1997;25:3389–3402.
  • Tatusova TA, Madden TL. Blast 2 sequence – a new tool for comparing protein and nucleotide sequence. FEMS Microbiol Lett. 1999;174:247–250.
  • Song WY, Wang GL, Gardner J, Olsten T, Ronald PC. Evolution of the rice Xa21 disease resistance gene family. Plant Cell. 1997;9:1279–1287.
  • Ellins JG, Lawrence GJ, Luck JE, Dodds N. Identification of regions in alleles of the flax rust resistance gene L that determine differences in gene-for-gene specificity. Plant Cell. 1999;11:495–506.
  • Cana EF, Geffroy V, Macadre F, Imbert-Bollore P, Sevignac M, Langin T. Characterization of expressed NBS-LRR resistance gene candidates from common bean. Theor Appl Genet. 2003;106:251–261.
  • Meyers BC, Kozik A, Griego A, Kuang H, Michelmore RW. Genome-wide analysis of NBS-LRR-encoding genes in Arabidopsis. Plant Cell. 2003;15:809–834.
  • Monosi B, Wisser RJ, Pennil L, Hulbert SH. Full-genome analysis of resistance gene homologues in rice. Theor Appl Genet. 2004;109:1434–1447.
  • Meyers BC, Dickerman AW, Michelmore RW, Sivaramakrishnan S, Sobral BW, Yong ND. Plant disease resistance genes encode members of an ancient and diverse protein family within nucleotide-binding superfamily. Plant J. 1999;20:317–332.