References
- Mendre C, Sarrade V, Calas B. Continuous flow synthesis of peptides using a polyacrylamide gel resin (Expansin). Int J Pept Protein Res. 1992;39:278–284.
- McQueen-Mason SJ, Cosgrove DJ. Expansin mode of action on cell walls. Analysis of wall hydrolysis, stress relaxation, and binding. Plant Physiol. 1995;107:87–100.
- Sampedro J, Cosgrove DJ. The expansin superfamily. Genome Biol. 2005;6:242.
- Cho HT, Kende H. Expansins in deepwater rice internodes. Plant Physiol. 1997;113:1137–1143.
- Cosgrove DJ. Loosening of plant cell walls by expansins. Nature. 2000;407:321–326.
- Cosgrove DJ, Li LC, Cho HT, et al. The growing world of expansins. Plant Cell Physiol. 2002;43:1436–1444.
- Choi D, Lee Y, Cho HT, et al. Regulation of expansin gene expression affects growth and development in transgenic rice plants. Plant Cell. 2003;15:1386–1398.
- Wu Y, Thorne ET, Sharp RE, et al. Modification of expansin transcript levels in the maize primary root at low water potentials. Plant Physiol. 2001;126:1471–1479.
- Guo W, Zhao J, Li X, et al. A soybean beta-expansin gene GmEXPB2 intrinsically involved in root system architecture responses to abiotic stresses. Plant J. 2011;66:541–552.
- Lu P, Kang M, Jiang X, et al. RhEXPA4, a rose expansin gene, modulates leaf growth and confers drought and salt tolerance to Arabidopsis. Planta. 2013;237:1547–1559.
- Kuluev BR, Kniazev AV, Nikonorov Iu M, et al. Role of the expansin genes NtEXPA1 and NtEXPA4 in the regulation of cell extension during tobacco leaf growth. Genetika. 2014;50:560–569.
- Chen F, Bradford KJ. Expression of an expansin is associated with endosperm weakening during tomato seed germination. Plant Physiol. 2000;124:1265–1274.
- Magneschi L, Kudahettige RL, Alpi A, et al. Expansin gene expression and anoxic coleoptile elongation in rice cultivars. J Plant Physiol. 2009;166:1576–1580.
- Harrison EP, McQueen-Mason SJ, Manning K. Expression of six expansin genes in relation to extension activity in developing strawberry fruit. J Exp Bot. 2001;52:1437–1446.
- Pezzotti M, Feron R, Mariani C. Pollination modulates expression of the PPAL gene, a pistil-specific beta-expansin. Plant Mol Biol. 2002;49:187–197.
- Young ND, Debelle F, Oldroyd GE, et al. The Medicago genome provides insight into the evolution of rhizobial symbioses. Nature. 2011;480:520–524.
- Dal Santo S, Vannozzi A, Tornielli GB, et al. Genome-wide analysis of the expansin gene superfamily reveals grapevine-specific structural and functional characteristics. PLOS One. 2013;8:e62206.
- Altschul SF, Madden TL, Schaffer AA, et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 1997;25:3389–3402.
- Finn RD, Clements J, Eddy SR. HMMER web server: interactive sequence similarity searching. Nucleic Acids Res. 2011;39:W29–W37.
- Finn RD, Mistry J, Schuster-Böckler B, et al. Pfam: clans, web tools and services. Nucleic Acids Res. 2006;34:D247–D251.
- Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 1994;22:4673–4680.
- Tamura K, Dudley J, Nei M, et al. MEGA4: molecular evolutionary genetics analysis (MEGA) software wersion 4.0. Mol Biol Evol. 2007;24:1596–1599.
- Krzywinski MI, Schein JE, Birol I, et al. Circos: an information aesthetic for comparative genomics. Genome Res. 2009;19:1639–1645.
- Trapnell C, Pachter L, Salzberg SL. TopHat: discovering splice junctions with RNA-Seq. Bioinformatics. 2009;25:1105–1111.
- Trapnell C, Roberts A, Goff L, et al. Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks. Nat Protoc. 2012;7:562–578.
- Higo K, Ugawa Y, Iwamoto M, et al. PLACE: a database of plant cis-acting regulatory DNA elements. Nucleic Acids Res. 1998;26:358–359.
- Hemalatha N, Rajesh MK, Narayanan NK. Genome-wide analysis and identification of genes related to expansin gene family in indica rice. Int J Bioinform Res Appl. 2011;7:162–167.
- Zhu Y, Wu N, Song W, et al. Soybean (Glycine max) expansin gene superfamily origins: segmental and tandem duplication events followed by divergent selection among subfamilies. BMC Plant Biol. 2014;14:93.
- Sampedro J, Carey RE, Cosgrove DJ. Genome histories clarify evolution of the expansin superfamily: new insights from the poplar genome and pine ESTs. J Plant Res. 2006;119:11–21.
- Zhang W, Yan H, Chen W, et al. Genome-wide identification and characterization of maize expansin genes expressed in endosperm. Mol Genet Genomics. 2014;289:1061–1074.
- Yanagisawa S. The Dof family of plant transcription factors. Trends Plant Sci. 2002;7:555–560.
- Pattanaik S, Xie CH, Yuan L. The interaction domains of the plant Myc-like bHLH transcription factors can regulate the transactivation strength. Planta. 2008;227:707–715.
- Agarwal P, Reddy MP, Chikara J. WRKY: its structure, evolutionary relationship, DNA-binding selectivity, role in stress tolerance and development of plants. Mol Biol Rep. 2011;38:3883–3396.
- Matsui A, Mizunashi K, Tanaka M, et al. tasiRNA-ARF pathway moderates floral architecture in arabidopsis plants subjected to drought stress. Biomed Res Int. 2014;2014:303451.