References
- Von Dassow P, Montresor M. Unveiling the mysteries of phytoplankton life cycles: patterns and opportunities behind complexity. J Plankton Res. 2011;33:3–12.
- Lundholm N, Ribeiro S, Andersen TJ, et al. Buried alive–germination of up to a century-old marine protist resting stages. Phycologia. 2011;50:629–640.
- Rubino F, Moncheva S, Belmonte M, et al. Resting stages produced by plankton in the Black Sea—biodiversity and ecological perspective. Rapp Comm Int Mer Médit. 2010;39:399.
- Lennon JT, Jones SE. Microbial seed banks: the ecological and evolutionary implications of dormancy. Nat Rev Microbiol. 2011;9:119–130.
- Hallegraeff GM. A review of harmful algal blooms and their apparent global increase. Phycologia. 1993;32:79–99.
- Gong J, Shi F, Ma B, et al. Depth shapes α-and β-diversities of microbial eukaryotes in surficial sediments of coastal ecosystems. Environ Microbiol. 2015;17:3722–3737.
- Forster D, Dunthorn M, Mahé F, et al. Benthic protists: the under-charted majority. FEMS Microb Ecol. 2016;92:fiw120. [cited 2018 Jul 24]DOI:10.1093/femsec/fiw120
- Piredda R, Sarno D, Lange CB, et al. Diatom resting stages in surface sediments: A pilot study comparing next generation sequencing and serial dilution cultures. Cryptogam Algol. 2017;38:31–46.
- Tanabe AS, Nagai S, Hida K, et al. Comparative study of the validity of three regions of the 18SrRNA gene for massively parallel sequencing-based monitoring of the planktonic eukaryote community. Mol Ecol Resour. 2016;16:402–414.
- Dzhembekova N, Urusizaki S, Moncheva S, et al. Applicability of massively parallel sequencing on monitoring harmful algae at Varna Bay in the Black Sea. Harmful Algae. 2017;68:40–51.
- Schloss PD, Gevers D, Westcott SL. Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies. PloS One. 2011;6:e27310. [cited 2018 Jul 24]DOI:10.1371/journal.pone.0027310
- Edgar RC, Haas BJ, Clemente JC, et al. UCHIME improves sensitivity and speed of chimera detection. Bioinformatics. 2011;27:2194–2200.
- Camacho C, Coulouris G, Avagyan V, et al. BLAST+: architecture and applications. BMC Bioinformatics. 2009;10:421. [cited 2018 Jul 24]DOI:10.1186/1471-2105-10-421
- Oksanen J, Blanchet FG, Kindt R, et al. vegan: Community Ecology Package. R package version 1.17-2. R Foundation for Statistical Computing, Vienna. Available: CRAN. R-project. org/package = vegan. 2011.
- Pawlowski J, Christen R, Lecroq B, et al. Eukaryotic richness in the abyss: insights from pyrotag sequencing. PLoS One. 2011;6:e18169. [cited 2018 Jul 24]DOI:10.1371/journal.pone.0018169
- Mudie PJ, Marret F, Mertens KN, et al. Atlas of modern dinoflagellate cyst distributions in the Black Sea Corridor: from Aegean to Aral Seas, including Marmara, Black, Azov and Caspian Seas. Mar Micropaleontol. 2017;134:1–52.
- Aydin H, Balci M, Uzar S, et al. Dinoflagellate cyst assemblages in surface sediments of southwestern Black Sea and Çanakkale Strait (Dardanelles). Fresenius Environ Bull. 2015;24:4789–4798.
- Moncheva S, Parr B. Black Sea phytoplankton checklist. In: Black Sea monitoring guidelines-phytoplankton. Istanbul: BlackSea Commission; 2015. p. 46.
- Ishikawa A, Kitami S, Ishii KI, et al. Resting stage cells of diatoms in deep waters in Kumano-Nada, central part of Japan. Plankton Benthos Res. 2011;6:206–209.
- Fietz S, Bleiss W, Hepperle D, et al. First record of Nannochloropsis limnetica (Eustigmatophyceae) in the autotrophic picoplankton from Lake Baikal. J Phycol. 2005;41:780–790.
- Ellegaard M, Moestrup Ø, Joest Andersen T, et al. Long-term survival of haptophyte and prasinophyte resting stages in marine sediment. Eur J Phycol. 2016;51:328–337.
- Moestrup O. IOC-UNESCO taxonomic reference list of harmful micro algae. http://www.marinespecies.org/HAB. 2009.
- Gu H, Luo Z, Krock B, et al. Morphology, phylogeny and azaspiracid profile of Azadinium poporum (Dinophyceae) from the China Sea. Harmful Algae. 2013;21–22:64–75.
- Mohamed ZA, Al-Shehri AM. Occurrence and germination of dinoflagellate cysts in surface sediments from the Red Sea off the coasts of Saudi Arabia. Oceanologia. 2011;53:121–136.
- Cucchiari E, Pistocchi R, Pezzolesi L, et al. Resting cysts of Fibrocapsa japonica (Raphidophyceae) from coastal sediments of the northern Adriatic Sea (Mediterranean Sea). Harmful Algae. 2010;10:81–87.
- Imai I, Itakura S, Ito K. Cysts of the red tide flagellate Heterosigma akashiwo, Raphidophyceae, found in bottom sediments of northern Hiroshima Bay, Japan. Bull Jpn Soc Sci Fisheries-Nihon Suisan Gakkaishi. 1993;59:1669–1674.
- Orlova TY, Morozova TV. Resting stages of microalgae in recent marine sediments of Peter the Great Bay, Sea of Japan. Russ J Mar Biol. 2009;35:313–322.
- Větrovský T, Baldrian P. The variability of the 16S rRNA gene in bacterial genomes and its consequences for bacterial community analyses. PloS One. 2013;8:e57923. [cited 2018 Jul 24]DOI:10.1371/journal.pone.0057923
- Penna A, Casabianca S, Perini F, et al. Toxic Pseudo-nitzschia spp. in the northwestern Adriatic Sea: characterization of species composition by genetic and molecular quantitative analyses. J Plankton Res. 2013;35:352–366.
- Corinaldesi C, Barucca M, Luna GM, et al. Preservation, origin and genetic imprint of extracellular DNA in permanently anoxic deep-sea sediments. Mol Ecol. 2011;20:642–654.