1,148
Views
3
CrossRef citations to date
0
Altmetric
Research Article

Genome-wide identification and expression analysis of the AAAP family in Fragaria vesca

, , , , , , , , , & show all
Pages 790-799 | Received 14 Apr 2020, Accepted 02 Aug 2020, Published online: 20 Aug 2020

References

  • Young VR, Wayler A, Garza C, et al. A long-term metabolic balance study in young men to assess the nutritional quality of an isolated soy protein and beef proteins. Am J Clin Nutr. 1984;39(1):8–15.
  • Wu G. Amino acids: metabolism, functions, and nutrition. Amino Acids. 2009;37(1):1–17.
  • Carrillo C, Canepa GE, Giacometti A, et al. Trypanosoma cruzi amino acid transporter TcAAAP411 mediates arginine uptake in yeasts. FEMS Microbiol Lett. 2010;306(2):97–102.
  • Conlon NJ, Edwards N, Cmh A, et al. Rheogenic amino acid transport by Drosophila CG4991 of the Amino Acid Auxin Permease (AAAP) transporter family. FASEB J. 2013 March;27:1093.
  • Hu L, Yin W, Chen Y, et al. Functional divergence and evolutionary dynamics of the putative AAAP gene family in Brassica rapa. Plant Mol Biol Rep. 2014;32(2):517–530.
  • Okumoto S, Koch W, Tegeder M, et al. Root phloem-specific expression of the plasma membrane amino acid proton co-transporter AAP3. J Exp Bot. 2004;55(406):2155–2168.
  • Etxeberria E, Gonzalez P, Pozueta-Romero J. Sucrose transport into citrus juice cells: evidence for an endocytic transport system. JASHS. 2005;130(2):269–274.
  • Ortiz-Lopez A, Chang H, Bush DR. Amino acid transporters in plants. Biochim Biophys Acta (BBA)-Biomembranes. 2000;1465(1-2):275–280.
  • Xia J, Yang Z, Cheng G, et al. Genome-wide identification and expression analysis of amino acid transporters in the Whitefly, Bemisia tabaci (Gennadius). Int J Biol Sci. 2017;13(6):735–747.
  • Igarashi Y, Yoshiba Y, Takeshita T, et al. Molecular cloning and characterization of a cDNA encoding proline transporter in rice. Plant Cell Physiol. 2000;41(6):750–756.
  • Svennerstam H, Ganeteg U, Bellini C, et al. Comprehensive screening of Arabidopsis mutants suggests the lysine histidine transporter 1 to be involved in plant uptake of amino acids. Plant Physiol. 2007;143(4):1853–1860.
  • Lee CP, Wirtz M, Hell R. Evidence for several cysteine transport mechanisms in the mitochondrial membranes of Arabidopsis thaliana. Plant Physiol. 2014;55(1):64–73.
  • Sanders A, Collier R, Trethewy A, et al. AAP1 regulates import of amino acids into developing Arabidopsis embryos. Plant J. 2009;59(4):540–552.
  • Peng B, Kong H, Li Y, et al. OsAAP6 functions as an important regulator of grain protein content and nutritional quality in rice. Nat Commun. 2014; September 11; 5:4847
  • Cheng L, Yuan H, Ren R, et al. Genome-wide identification, classification, and expression analysis of amino acid transporter gene family in Glycine Max. Front Plant Sci. 2016; April 20; 7:515
  • Marella H, Nielsen E, Schachtman DP, et al. The amino acid permeases AAP3 and AAP6 are involved in root-knot nematode parasitism of Arabidopsis. Mol Plant Microbe Interact. 2013;26(1):44–54.
  • Farinati S, Rasori A, Varotto S, et al. Rosaceae fruit development, ripening and post-harvest: an epigenetic perspective. Front Plant Sci. 2017; July 17; 8:1247
  • Tahir HE, Zou X, Shi J, et al. Quality and postharvest-shelf life of cold-stored strawberry fruit as affected by gum arabic (Acacia senegal) edible coating. J Food Biochem. 2018;42(3):e12527. January 21;
  • Kim J, Lee SY, Kim D, et al. Genotyping of octoploid strawberry inbred lines by SNP discovery using genotyping-by-sequencing. Hortic Environ Biotechnol. 2019;60(1):69–80.
  • Peres NA, Timmer LW, Adaskaveg JE, et al. Lifestyles of Colletotrichum acutatum. Plant Dis. 2005;89(8):784–796.
  • McInnes TB, Black LL, Gatti JM. Disease-free plants for management of strawberry anthracnose crown rot. Plant Dis. 1992;76(3):260–264.
  • Lim S, Seo J, Choi H, et al. Metagenome analysis of protein domain collocation within cellulase genes of goat rumen microbes. Asian-Australas J Anim Sci. 2013;26(8):1144–1151.
  • Zhao H, Ma H, Yu L, et al. Genome-wide survey and expression analysis of amino acid transporter gene family in rice (Oryza sativa L.). PLoS One. 2012;7(11):e49210November 15;
  • Wu M, Wu S, Chen Z, et al. Genome-wide survey and expression analysis of the amino acid transporter gene family in poplar. Tree Genet Genomes. 2015;11(4):83. July 31;
  • Qu Y, Ling L, Wang D, et al. Genome-wide identification and expression analysis of the AAAP family in Medicago truncatula. Genetica. 2019;147(2):185–196.
  • Sheng L, Deng L, Yan H, et al. A genome-wide analysis of the AAAP gene family in maize. Journal of Proteomics and Bioinformatics. 2014; 7:23–33.
  • Liu H, Wu M, Zhu D, et al. Genome-wide analysis of the AAAP gene family in moso bamboo (Phyllostachys edulis). BMC Plant Biol. 2017;17(1):29January 31;
  • de Billy F, Grosjean C, May S, et al. Expression studies on AUX1-like genes in Medicago truncatula suggest that auxin is required at two steps in early nodule development. Mol Plant Microbe Interact. 2001;14(3):267–277.
  • Zhao H, Ma T, Wang X, et al. OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant Cell Environ. 2015;38(11):2208–2222.
  • Liu X, Bush DR. Expression and transcriptional regulation of amino acid transporters in plants. Amino Acids. 2006;30(2):113–120.
  • Pacini E, Dolferus R. The trials and tribulations of the plant male gametophyte—understanding reproductive stage stress tolerance. In: Shanker A, Shanker C, editors. Abiotic and biotic stress in plants - recent advances and future perspectives. London: IntechOpen; 2016. p. 704–754.
  • Michaeli S, Fromm H. Closing the loop on the GABA shunt in plants: are GABA metabolism and signaling entwined? Front Plant Sci. 2015 June;6:419.
  • Mead O, Thynne E, Winterberg B, et al. Characterising the role of GABA and its metabolism in the wheat pathogen Stagonospora nodorum. PLoS One. 2013 November;8(11):e78368.