Molecular characterization and bioactive potential of newly identified strains of the extremophilic black yeast Hortaea werneckii isolated from Red Sea mangrove

References

• Prakash D, Saxena R. Antimicrobial susceptibility pattern of human pathogenic bacteria related to Enterobacteriaceae family causing urinary tract infection. Adv Appl Sci Res. 2013;4:98–104.
   Google Scholar
• Wiyakrutta S, Sriubolmas N, Panphut W, et al. Endophytic fungi with anti-microbial, anti-cancer and anti-malarial activities isolated from Thai medicinal plants. World J Microbiol Biotechnol. 2004;20(3):265–272.
   Web of Science ®Google Scholar
• Amiri A, Dugas R, Pichot AL, et al. In vitro and in vivo [corrected] activity of eugenol oil (Eugenia caryophylata) against four important postharvest apple pathogens. Int J Food Microbiol. 2008;126(1–2):13–19.
   PubMed Web of Science ®Google Scholar
• Dias DA, Urban S, Roessner U. A historical overview of natural products in drug discovery. Metabolites. 2012;2(2):303–336.
   PubMedGoogle Scholar
• Gunatilaka AL. Natural products from plant-associated microorganisms: distribution, structural diversity, bioactivity, and implications of their occurrence. J Nat Prod. 2006;69(3):509–526.
   PubMed Web of Science ®Google Scholar
• Ravot G, Masson J-M, Lefèvre F. 34 applications of extremophiles: the industrial screening of extremophiles for valuable biomolecules. Methods Microbiol. 2006;35:785–813.
   Web of Science ®Google Scholar
• Sánchez LA, Gómez FF, Delgado OD. Cold-adapted microorganisms as a source of new antimicrobials. Extremophiles. 2009;13(1):111–120.
   PubMed Web of Science ®Google Scholar
• Bhadury P, Mohammad BT, Wright PC. The current status of natural products from marine fungi and their potential as anti-infective agents. J Ind Microbiol Biotechnol. 2006;33(5):325–337.
   PubMed Web of Science ®Google Scholar
• Sepcic K, Zalar P, Gunde-Cimerman N. Low water activity induces the production of bioactive metabolites in halophilic and halotolerant fungi. Marine Drugs. 2010;9(1):43–58.
   PubMed Web of Science ®Google Scholar
• Gostinčar C, Lenassi M, Gunde-Cimerman N, et al. Fungal adaptation to extremely high salt concentrations. Adv Appl Microbiol. 2011;77:71–96.
   PubMed Web of Science ®Google Scholar
• Gunde-Cimerman N, Zalar P, De Hoog S, et al. Hypersaline waters in salterns–natural ecological niches for halophilic black yeasts. FEMS Microbiol Ecol. 2000;32(3):235–240.
   PubMed Web of Science ®Google Scholar
• Butinar L, Santos S, Spencer-Martins I, et al. Yeast diversity in hypersaline habitats. FEMS Microbiol Lett. 2005;244(2):229–234.
   PubMed Web of Science ®Google Scholar
• Zalar P, Kocuvan MA, Plemenitaš A, et al. Halophilic black yeasts colonize wood immersed in hypersaline water. Botanica Marina. 2005;48(4):323–326.
   Web of Science ®Google Scholar
• Plemenitaš A, Gunde-Cimerman N. Cellular responses in the halophilic black yeast Hortaea werneckii to high environmental salinity. In Adaptation to life at high salt concentrations in Archaea, Bacteria, and Eukarya. Dordrecht: Springer; 2005. p. 453–470.
   Google Scholar
• Gunde-Cimerman N, Plemenitaš A. Ecology and molecular adaptations of the halophilic black yeast Hortaea werneckii. In: Life in extreme environments. Springer; 2006. p. 177–185.
   Google Scholar
• Plemenitaš A, Vaupotic T, Lenassi M, et al. Adaptation of extremely halotolerant black yeast Hortaea werneckii to increased osmolarity: a molecular perspective at a glance. Stud Mycol. 2008;61:67–75.
   PubMed Web of Science ®Google Scholar
• De Hoog G, Zalar P, Urzi C, et al. Relationships of dothideaceous black yeasts and meristematic fungi based on 5.8 S and ITS2 rDNA sequence comparison. Stud Mycol. 1999;43:31–37.
   Google Scholar
• Mayr BM, Kobold U, Moczko M, et al. Identification of bacteria by polymerase chain reaction followed by liquid chromatography − mass spectrometry. Anal Chem. 2005;77(14):4563–4570.
   PubMed Web of Science ®Google Scholar
• Yıldırım İH, Yıldırım SC, Koçak N. Molecular methods for bacterial genotyping and analyzed gene regions. J Microbiol Infect Dis. 2011;1:42–46.
   Google Scholar
• Uijthof J, De Cock A, De Hoog G, et al. Polymerase chain reaction-mediated genotyping of Hortaea werneckii, causative agent of tinea nigra. Mycoses. 1994;37(9–10):307–312.
   PubMed Web of Science ®Google Scholar
• Hodhod M. Molecular systematics of Marine Fungi isolated from Yanbu Mangroves in the Kingdom of Saudi Arabia [MS Thesis]. Riyadh, Saudi Arabia: King Saud University; 2013. p. 143.
   Google Scholar
• Hong J-H, Jang S, Heo YM, et al. Investigation of marine-derived fungal diversity and their exploitable biological activities. Marine Drugs. 2015;13(7):4137–4155.
   PubMed Web of Science ®Google Scholar
• Huelsenbeck JP, Ronquist F. MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics. 2001;17(8):754–755.
   PubMed Web of Science ®Google Scholar
• Ronquist F, Huelsenbeck JP. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics. 2003;19(12):1572–1574.
   PubMed Web of Science ®Google Scholar
• Li H, Qing C, Zhang Y, et al. Screening for endophytic fungi with antitumour and antifungal activities from Chinese medicinal plants. World J Microbiol Biotechnol. 2005;21(8–9):1515–1519.
   Web of Science ®Google Scholar
• Reller LB, Weinstein M, Jorgensen JH, Ferraro MJ. Antimicrobial susceptibility testing: a review of general principles and contemporary practices. Clin Infect Dis. 2009;49(11):1749–1755.
   PubMed Web of Science ®Google Scholar
• Balouiri M, Sadiki M, Ibnsouda SK. Methods for in vitro evaluating antimicrobial activity: a review. J Pharm Anal. 2016;6(2):71–79.
   PubMed Web of Science ®Google Scholar
• Devi N, Prabakaran J. Bioactive metabolites from an endophytic fungus Penicillium sp. isolated from Centella asiatica. CREAM. 2014;4(1):34–43.
   Google Scholar
• Giddings L-A, Newman DJ. Bioactive compounds from extremophilic marine fungi. In: Fungi in extreme environments: ecological role and biotechnological significance. Cham: Springer; 2019. p. 349–382.
   Google Scholar
• Ibrar M, Ullah M, Manan S, et al. Fungi from the extremes of life: an untapped treasure for bioactive compounds. Appl Microbiol Biotechnol. 2020;104(7):2777–2801.
   PubMed Web of Science ®Google Scholar
• Gallo M, Amonette R, Lauber C, et al. Microbial community structure and oxidative enzyme activity in nitrogen-amended north temperate forest soils. Microb Ecol. 2004;48(2):218–229.
   PubMed Web of Science ®Google Scholar
• Abdel-Wahab M. 2000. Diversity of fungi in subtropical mangroves [PhD thesis]. Sohag, Egypt: Faculty of Science at Sohag, South Valley University.
   Google Scholar
• Jones EBG, Suetrong S, Sakayaroj J, et al. Classification of marine ascomycota, basidiomycota, blastocladiomycota and chytridiomycota. Fungal Diversity. 2015;73(1):1–72.
   Web of Science ®Google Scholar
• Kechkar M, Sayed W, Cabrol A, et al. Isolation and identification of yeast strains from sugarcane molasses, dates and figs for ethanol production under conditions simulating algal hydrolysate. Braz J Chem Eng. 2019;36(1):157–169.
   Web of Science ®Google Scholar
• Hossain F, Follett P, Salmieri S, et al. Antifungal activities of combined treatments of irradiation and essential oils (EOs) encapsulated chitosan nanocomposite films in in vitro and in situ conditions. Int J Food Microbiol. 2019;295:33–40.
   PubMed Web of Science ®Google Scholar
• Cardozo VF, Oliveira AG, Nishio EK, et al. Antibacterial activity of extracellular compounds produced by a Pseudomonas strain against methicillin-resistant Staphylococcus aureus (MRSA) strains. Ann Clin Microbiol Antimicrob. 2013;12:12–18.
   PubMed Web of Science ®Google Scholar
• Elshikh M, Ahmed S, Funston S, et al. Resazurin-based 96-well plate microdilution method for the determination of minimum inhibitory concentration of biosurfactants. Biotechnol Lett. 2016;38(6):1015–1019.
   PubMed Web of Science ®Google Scholar
• Yang Z, Hao X, Chen S, et al. Long-term antibacterial stable reduced graphene oxide nanocomposites loaded with cuprous oxide nanoparticles. J Colloid Interface Sci. 2019;533:13–23.
   PubMed Web of Science ®Google Scholar
• Rani MHS, Ramesh T, Subramanian J, et al. Production and characterization of melanin pigment from halophilic black yeast Hortaea werneckii. Int J Pharma Res Rev. 2013;2:9–17.
   Google Scholar
• Nikalje APG, Ghodke MS, Mirza SB. 2-azetidinone-a brief review. World J Pharm Pharm Sci. 2013;3:2589–2625.
   Google Scholar
• Ngutter C, Donnelly C. Nitrite-induced injury of Listeria monocytogenes and the effect of selective versus nonselective recovery procedures on its isolation from frankfurters. J Food Prot. 2003;66(12):2252–2257.
   PubMed Web of Science ®Google Scholar
• Chandrasekaran M, Kannathasan K, Venkatesalu V. Antimicrobial activity of fatty acid methyl esters of some members of Chenopodiaceae. Zeitschrift Für Naturforschung C. 2008;63(5–6):331–336.
   PubMed Web of Science ®Google Scholar
• Graham JH, Hodge NC, Morton JB. Fatty Acid methyl ester profiles for characterization of glomalean fungi and their endomycorrhizae. Appl Environ Microbiol. 1995;61(1):58–64.
   PubMed Web of Science ®Google Scholar
• Chandrasekaran M, Senthilkumar A, Venkatesalu V. Antibacterial and antifungal efficacy of fatty acid methyl esters from the leaves of Sesuvium portulacastrum L. Eur Rev Med Pharmacol Sci. 2011;15(7):775–780.
   PubMed Web of Science ®Google Scholar
• Cushnie TT, Cushnie B, Lamb AJ. Alkaloids: an overview of their antibacterial, antibiotic-enhancing and antivirulence activities. Int J Antimicrob Agents. 2014;44(5):377–386.
   PubMed Web of Science ®Google Scholar