Molecular phylogeny and systematics of Australian ‘Iravadiidae’ (Caenogastropoda: Truncatelloidea)

REFERENCES

• Blanford, W.T. (1867) Contributions to Indian malacology No. 8. List of estuary shells collected in the Irawadi in Pegu, with descriptions of new species. Journal of the Asiatic Society of Bengal 36, 51–72.
   Google Scholar
• Brandt, R.A.M. (1968) Description of new non-marine molluscs from Asia. Archiv für Molluskenkunde 98, 213–289.
   Google Scholar
• Brandt, R.A.M. (1974) The non-marine aquatic Mollusca of Thailand. Archiv für Molluskenkunde 105, 1–423.
   Google Scholar
• Bouchet, P. & Rocroi, J.-P. (2005) Classification and nomenclator of gastropod families. Malacologia 47, 1–397.
   Web of Science ®Google Scholar
• Cossmann, M. & Peyrot, A. (1919) Conchologie néogénique de l'Aquitaine. Actes de la Société Linnéenne de Bordeaux 70, 181–356.
   Google Scholar
• Cotton, B.C. (1944) Recent Australian species of the family Rissoidae (Mollusca). Transactions of the Royal Society of South Australia 68, 286–314.
   Google Scholar
• Criscione, F. & Ponder, W.F. (2012) A phylogenetic analysis of rissooidean and cingulopsoidean families (Gastropoda: Caenogastropoda). Molecular Phylogenetics and Evolution 66, 1075–1082. 10.1016/j.ympev.2012.11.026 doi: 10.1016/j.ympev.2012.11.026
   PubMed Web of Science ®Google Scholar
• Fukuda, H. (2000) Ceratia nagashima, sp. nov. (Gastropoda: Sorbeoconcha: Iravadiidae) from Tanoura, Nagashima Island, Kaminoseki-chô, Yamaguchi Prefecture, Japan. The Yuriyagai: Journal of the Malacozoological Association of Yamaguchi 7, 101–113.
   Google Scholar
• Golding, R.E. (2014) Molecular phylogeny and systematics of Australian and East Timorese Stenothyridae (Caenogastropoda: Truncatelloidea). Molluscan Research. 10.1080/13235818.2014.888969
   Google Scholar
• Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 41, 95–98.
   Google Scholar
• Hasegawa, K. (1997) Sunken wood-associated gastropods collected from Suruga Bay, Pacific side of the central Honshu, Japan, with descriptions of 12 new species. National Science Museum Monographs 12, 59–123.
   Google Scholar
• Hasegawa, K. (2000) Family iravadiidae. In: Okutani, T. (Ed.), Marine Mollusks in Japan. Tokyo University Press, Tokyo, Japan, pp. 163.
   Google Scholar
• Hedley, C. (1901) Studies on Australian Mollusca. Part III. Proceedings of the Linnean Society of New South Wales 25, 721–732.
   Google Scholar
• Hedley, C. (1908) Studies on Australian Mollusca. Part X. Proceedings of the Linnean Society of New South Wales 33, 456–489.
   Google Scholar
• Iredale, T. (1915) A commentary on Suter's “Manual of the New Zealand Mollusca”. Transactions & Proceedings of the New Zealand Institute 47, 417–497.
   Google Scholar
• Iredale, T. (1943) A basic list of the fresh water Mollusca of Australia. The Australian Zoologist 10, 188–230.
   Google Scholar
• Japanese Association of Benthology (Ed.) (2012) Threatened animals of Japanese tidal flats: Red data book of seashore benthos. Tokyo University Press, Tokyo, Japan.
   Google Scholar
• Katoh, K., Misawa, K., Kuma, K. & Miyata, T. (2002) MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Research 30, 3059–3066. 10.1093/nar/gkf436 doi: 10.1093/nar/gkf436
   PubMed Web of Science ®Google Scholar
• Katoh, K., Kuma, K., Toh, H. & Miyata, T. (2005) MAFFT version 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Research 33, 511–518. 0.1093/nar/gki198 doi: 10.1093/nar/gki198
   PubMed Web of Science ®Google Scholar
• Katoh, K. & Toh, H. (2008) Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework. BMC Bioinformatics 9, 212. 10.1186/1471-2105-9-212 doi: 10.1186/1471-2105-9-212
   PubMed Web of Science ®Google Scholar
• Kuroda, T. & Habe, T. (1954) New aquatic gastropods from Japan. Venus 18, 71–79.
   Google Scholar
• Laseron, C.F. (1955) Revision of the New South Wales eulimoid shells. The Australian Zoologist 12, 83–107.
   Google Scholar
• Laseron, C.F. (1956) The families Rissoinidae and Rissoidae (Mollusca) from the Solanderian and Dampierian zoogeographical provinces. Australian Journal of Marine and Freshwater Research 7, 384–484. doi: 10.1071/MF9560384
   Google Scholar
• Maddison, W.P. & Maddison, D.R. (2011) Mesquite: a modular system for evolutionary analysis. Version 2.75. Available online at http://mesquiteproject.org
   Google Scholar
• Melvill, J.C. (1893) Description of twenty-five new species of marine shells from Bombay, collected by Mr. Alexander Abercrombie. Journal of the Bombay Natural History Society 8, 234–245.
   Google Scholar
• Pchelintsev, V.F., & Korobkov, I.A. (1960) Osnovy Paleontologii, Mollusca–Gastropoda. Akademiya Nauk SSSR, Moscow, 360 p. [in Russian]
   Google Scholar
• Ponder, W.F. (1984) A review of the genera of the Iravadiidae (Gastropoda: Rissoacea) with an assessment of the relationships of the family. Malacologia 25, 21–71.
   Web of Science ®Google Scholar
• Ponder, W.F. (1985) The anatomy and relationship of Elachisina Dall (Gastropoda: Rissoacea). Journal of Molluscan Studies 51, 23–34.
   Web of Science ®Google Scholar
• Ponder, W.F. (1994) The anatomy and relationships of three species of vitrinelliform gastropods from Hong Kong (Caenogastropoda: Rissooidea). In: Morton, B. (Ed.), The Malacofauna of Hong Kong and Southern China 3. Proceedings of the Third International Workshop on the Malacofauna of Hong Kong and Southern China. Hong Kong University Press, Hong Kong, pp. 243–281.
   Google Scholar
• Ponder, W.F. & de Keyzer, R.G. (1998) Superfamily Rissooidea. In: Beesley, P.L., Ross, G.J.B. & Wells, A. (Eds), Mollusca: The Southern Synthesis. Fauna of Australia. Vol. 5. CSIRO Publishing, Melbourne, Part B, pp. 745–766.
   Google Scholar
• Rambaut, A. & Drummond, A.J. (2007) Tracer v1.4. Available online at http://beast.bio.ed.ac.uk/Tracer
   Google Scholar
• Robba, E., Di Geronimo, I., Chaimanee, N., Negri, M.P. & Sanfilippo, R. (2003) Holocene and Recent shallow soft-bottom molluscs from the northern Gulf of Thailand area: Scaphopoda, Gastropoda, additions to Bivalvia. La Conchiglia 309(supplement), 5–288.
   Google Scholar
• Ronquist, F. & Huelsenbeck, J.P. (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19, 1572–1574. 10.1093/bioinformatics/btg180 doi: 10.1093/bioinformatics/btg180
   Google Scholar
• Silvestro, D. & Michalak, I. (2011) raxmlGUI: a graphical front-end for RAxML. Organisms, Diversity and Evolution, 10.1007/s13127–011–0056–0
   Google Scholar
• Stamatakis, A. (2006) RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22, 2688–2690. 10.1093/bioinformatics/btl446 doi: 10.1093/bioinformatics/btl446
   PubMed Web of Science ®Google Scholar
• Starobogatov, Y.I. (1970) Fauna Molliuskov i Zoogeograficheskoe Raionirovanie Kontinental'nykh Vodoemov Zemnogo Shara [The Molluscan Fauna and Zoogeographical Zoning of the Continental Water Bodies of the World]. Nauka, Leningrad [In Russian].
   Google Scholar
• Starobogatov, Y.I., Sitnikova, T.Y. & Zatravkin, M.N. (1989) Family Iravadiidae (Gastropoda, Pectinibranchia) and its representatives in brackish waters of the USSR. Zoologicheskii Zhurnal 68, 35–44. [In Russian].
   Web of Science ®Google Scholar
• Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. (2011) MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution 28, 2731–2739. 10.1093/molbev/msr121 doi: 10.1093/molbev/msr121
   PubMed Web of Science ®Google Scholar
• Thiele, J.H. (1928) Revision des systems der Hydrobiiden und Melandiiden. Zoologische Jahrbücher, Abteilung Systematik, Ökologie und Geographie der Tiere 55, 351–402.
   Google Scholar