609
Views
1
CrossRef citations to date
0
Altmetric
Special Feature: Recent advances in the nitrogen-fixing symbiosis between Frankia and actinorhizal plants

Distribution of Frankia and ectomycorrhizal fungi in a denuded volcanic soil exposed by a landslide during heavy rainfall caused by typhoon No. 26 (Wipha) in 2013

, , , , &
Pages 133-139 | Received 07 Sep 2021, Accepted 28 Dec 2021, Published online: 18 Jan 2022

References

  • Agerer R. 1991. Characterization of ectomycorrhiza. In: Norris R, Read DJ, Varma AK, editors. Methods in microbiology, Vol. 23, Techniques for the study of mycorrhiza. London (UK): Academic Press; p. 25–73.
  • Allen MF. 1991. Mycorrhizae and succession. In: The ecology of mycorrhizae. Cambridge (UK): Cambridge University Press; p. 127–140.
  • Benson DR, Dawson JO. 2007. Recent advances in the biogeography and genecology of symbiotic Frankia and its host plants. Physiol Plant. 130:318–330. doi:10.1111/j.1399-3054.2007.00934.x.
  • Bogar LM, Kennedy PG. 2013. New wrinkles in an old paradigm: neighborhood effects can modify the structure and specificity of Alnus-associated ectomycorrhizal fungal communities. FEMS Microbiol Ecol. 83:767–777. doi:10.1111/1574-6941.12032.
  • Chaia EE, Wall LG, Huss-Danell K. 2010. Life in soil by the actinorhizal root nodule endophyte Frankia. a review. Symbiosis. 51:201–226. doi:10.1007/s13199-010-0086-y.
  • Dawson JO, Gottfried GJ, Hahn D. 2005. Occurrence, structure, and nitrogen-fixation of root nodules of actinorhizal Arizona alder. In: Gottfried GJ, Gebow BS, Eskew LG, eds. Edminster CB, compilers. Connecting Mountain Islands and Desert Seas: Biodiversity and Management of the Madrean Archipelago II. Proceedings of 5th Conference on Research and Resource Management in the Southwestern Deserts; 2004 May 11-15; Tucson, AZ. Fort Collins, CO: USDA-FS, RMRS. p. 75–79.
  • Gardes M, Bruns TD. 1993. ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts. Mol Ecol. 2:113–118. doi:10.1111/j.1365-294X.1993.tb00005.x.
  • Glassman SI, Levine CR, DiRocco AM, Battles JJ, Bruns TD. 2016. Ectomycorrhizal fungal spore bank recovery after a severe forest fire: some like it hot. ISME J. 10:1228–1239. doi:10.1038/ismej.2015.182.
  • Ito H, Matsui T, Tobita H, Igarashi T, Ogawa A, Matsuura Y. 2016. Woody biomass in the vicinity of a slope failure site occurred on the October 16, 2013, in Izu-Oshima Island. Bulletin of FFPRI. 15: 21–30. Japanese with English Summary.
  • Jeong SC, Ritchie NJ, Myrold DD. 1999. Molecular phylogenies of plants and Frankia support multiple origins of actinorhizal symbioses. Mol Phylogenet Evol. 13:493–503. doi:10.1006/mpev.1999.0692.
  • Kikuchi K, Matsushita N, Suzuki K, Hogetsu T. 2007. Flavonoids induce germination of basidiospores of the ectomycorrhizal fungus Suillus bovinus. Mycorrhiza. 17:563–570. doi:10.1007/s00572-007-0131-8.
  • Krumholz GD, Chval MS, McBride MJ, Tisa LS. 2003. Germination and physiological properties of Frankia spores. Plant Soil. 254:57–67. doi:10.1023/A:1024911231889.
  • Miller SL, Koo CD, Molina R. 1992. Early colonization of red alder and Douglas fir by ectomycorrhizal fungi and Frankia in soils from the Oregon coast range. Mycorrhiza. 2:53–61. doi:10.1007/BF00203250.
  • Moreau PA. 2005. A nomenclatural revision of the genus Alnicola (Cortinariaceae). Fungal Divers. 20:121–155.
  • Murakami W, Ogawa A, Ogawa Y, Daimaru H. 2016. Characteristics of roots distribution around slopes in Izu-Oshima Island where landslides occurred because of typhoon No. 26 (Wipha) in 2013. Bulletin of FFPRI. 15: 31–38. Japanese with English Summary.
  • Nagashima Y, Tani C, Yamamoto M, Sasakawa H. 2008. Host range of Frankia strains isolated from actinorhizal plants growing in Japan and their relatedness based on 16S rDNA. Soil Sci Plant Nutr. 54:685–693. doi:10.1111/j.1747-0765.2008.00320.x.
  • Nilsson RH, Larsson KH, Taylor AFS, Bengtsson-Palme J, Jeppesen TS, Schigel D, Kennedy P, Picard K, Glöckner FO, Tedersoo L, Saar, I, Kõljalg, U, Abarenkov, K . 2019. The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications. Nucleic Acids Res. 47:D259–D264. doi:10.1093/nar/gky1022.
  • Nouhra E, Pastor N, Becerra A, Areitio ES, Geml J. 2015. Greenhouse seedlings of Alnus showed low host intrageneric specificity and a strong preference for some Tomentella ectomycorrhizal associates. Microb Ecol. 69:813–825. doi:10.1007/s00248-014-0522-2.
  • Pawlowski K, Demchenko KN. 2012. The diversity of actinorhizal symbiosis. Protoplasma. 249:967–979. doi:10.1007/s00709-012-0388-4.
  • Perry DA, Amaranthus MP, Borchers JG, Borchers SL, Brainerd RE. 1989. Bootstrapping in ecosystems. Bioscience. 39:230–237. doi:10.2307/1311159.
  • Pokharel A, Mirza BS, Dawson JO, Hahn D. 2011. Frankia populations in soil and root nodules of sympatrically grown Alnus taxa. Microb Ecol. 61:92–100. doi:10.1007/s00248-010-9726-2.
  • Põlme S, Bahram M, Yamanaka T, Nara K, Dai Y-C, Grebenc T, Kraigher H, Toivonen M, Wang P-H, Matsuda Y, Naadel T, Kennedy PG, Kõljalg U, Tedersoo L . 2013. Species richness and community composition of ectomycorrhizal fungi associated with alders (Alnus spp.) in relation to biotic and abiotic variables at the global scale. New Phytol. 198:1239–1249. doi:10.1111/nph.12170.
  • Samant S, Huo T, Dawson JO, Hahn D. 2016. Abundance and relative distribution of Frankia host infection groups under actinorhizal Alnus glutinosa and non-actinorhizal Betula nigra trees. Microb Ecol. 71:473–481. doi:10.1007/s00248-015-0643-2.
  • Schwob G, Roy M, Pozzi AC, Herrera-Belaroussi A, Fernandeza MP, Kelly RM. 2018. In planta sporulation of Frankia spp. as a determinant of alder-symbiont interactions. Appl Environ Microbiol. 84:e01737–18. doi:10.1128/AEM.01737-18.
  • Sone Y, Tobita K, Terada Y, Ueno S, Azami K, Nonami S, Okitsu J, Yabe M. 2015. The mechanism of slope collapse in the foothills of the Izu Oshima Island volcano by typhoon no. 26 of 2013. OYO Technical Report. 34:1–22 Japanese with English Summary.
  • Taniguchi T, Kitajima K, Douhan GW, Yamanaka N, Allen MF. 2018. A pulse of summer precipitation after the dry season triggers changes in ectomycorrhizal formation, diversity, and community composition in a Mediterranean forest in California, USA. Mycorrhiza. 28:665–677. doi:10.1007/s00572-018-0859-3.
  • Taniguchi T, Yuzawa T, HuiPing M, Yamamoto F, Yamanaka N. 2021. Plantation soil inoculation combined with straw checkerboard barriers enhances ectomycorrhizal colonization and subsequent growth of nursery grown Pinus tabulaeformis seedlings in a dryland. Ecol Eng. 163:106191. doi:10.1016/j.ecoleng.2021.106191.
  • Veldre V, Abarenkov K, Bahram M, Martos F, Selosse MA, Tamm H, Kõljalg U, Tedersoo L. 2013. Evolution of nutritional modes of Ceratobasidiaceae (Cantharellales, Basidiomycota) as revealed from publicly available ITS sequences. Fungal Ecol. 6:256–268. doi:10.1016/j.funeco.2013.03.004.
  • Wardle DA, Bardgett RD, Klironomos JN, Setala H, van der Putten WH, Wall DH. 2004. Ecological linkages between aboveground and belowground biota. Science. 304:1629–1633. doi:10.1126/science.1094875.
  • White TJ, Bruns T, Lee S, Taylor JW. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, editors. PCR protocols: a guide to methods and applications. New York (USA): Academic Press; p. 315–322.
  • Yagame T, Yamato M, Suzuki A, Iwase K. 2008. Ceratobasidiaceae mycorrhizal fungi isolated from nonphotosynthetic orchid Chamaegastrodia sikokiana. Mycorrhiza. 18:97–101. doi:10.1007/s00572-007-0155-0.
  • Yamanaka T, Li CY, Bormann BT, Okabe H. 2003. Tripartite associations in an alder: effects of Frankia and Alpova diplophloeus on the growth, nitrogen fixation and mineral acquisition of Alnus tenuifolia. Plant Soil. 254:179–186. doi:10.1023/A:1024938712822.
  • Yamanaka T, Okabe H. 2003. Distribution of bacteria, Frankia and ectomycorrhizal fungi in the scoriae accumulated in volcano eruptions at Miyakle-Jima, Izu Island. J Japanese For Soc. 85:147–151. Japanese with English summary.
  • Yamanaka T, Okabe H. 2006. Distribution of Frankia, ectomycorrhizal fungi, and bacteria in soil after the eruption of Miyake-Jima (Izu Islands, Japan) in 2000. J For Res. 11:21–26. doi:10.1007/s10310-005-0179-2.
  • Yamanaka T, Okabe H, Kawai S. 2016. Growth and nodulation in Alnus sieboldiana inoculated with Frankia. Trees. 30:539–544. doi:10.1007/s00468-015-1246-8.
  • Yang H, Wang F, Miyajima M. 2015. Investigation of shallow landslides triggered by heavy rainfall during typhoon Wipha (2013), Izu Oshima Island, Japan. Geoenvironmental Disasters. 2:15. doi:10.1186/s40677-015-0023-8

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.