Publication Cover
Human Fertility
an international, multidisciplinary journal dedicated to furthering research and promoting good practice
Volume 26, 2023 - Issue 5
292
Views
0
CrossRef citations to date
0
Altmetric
Review Articles

Comprehensive bioinformation analysis of differentially expressed genes in recurrent pregnancy loss

ORCID Icon, , &
Pages 1015-1022 | Received 20 May 2021, Accepted 25 Jan 2022, Published online: 21 Mar 2022

References

  • Afshar, Y., Jeong, J. W., Roqueiro, D., DeMayo, F., Lydon, J., Radtke, F., Radnor, R., Miele, L., & Fazleabas, A. (2012). Notch1 mediates uterine stromal differentiation and is critical for complete decidualization in the mouse. FASEB Journal : official Publication of the Federation of American Societies for Experimental Biology, 26(1), 282–294. https://doi.org/10.1096/fj.11-184663
  • Barrett, T., Wilhite, S. E., Ledoux, P., Evangelista, C., Kim, I. F., Tomashevsky, M., Marshall, K. A., Phillippy, K. H., Sherman, P. M., Holko, M., Yefanov, A., Lee, H., Zhang, N., Robertson, C. L., Serova, N., Davis, S., & Soboleva, A. (2013). NCBI GEO: archive for functional genomics data sets-update. Nucleic Acids Research, 41(Database issue), D991–D995. https://doi.org/10.1093/nar/gks1193
  • Carp, H. (2019). Immunotherapy for recurrent pregnancy loss. Best Practice & Research. Clinical Obstetrics & Gynaecology, 60, 77–86. https://doi.org/10.1016/j.bpobgyn.2019.07.005
  • Chaouat, G., Zourbas, S., Ostojic, S., Lappree-Delage, G., Dubanchet, S., Ledee, N., & Martal, J. (2002). A brief review of recent data on some cytokine expressions at the materno-foetal interface which might challenge the classical Th1/Th2 dichotomy. Journal of Reproductive Immunology, 53(1-2), 241–256. https://doi.org/10.1016/S0165-0378(01)00119-X
  • De Las Rivas, J., & Fontanillo, C. (2010). Protein-protein interactions essentials: key concepts to building and analyzing interactome networks. PLoS Computational Biology, 6(6), e1000807 https://doi.org/10.1371/journal.pcbi.1000807
  • Dimitriadis, E., Menkhorst, E., Saito, S., Kutteh, W. H., & Brosens, J. J. (2020). Recurrent pregnancy loss. Nature Reviews. Disease Primers, 6(1), 98. https://doi.org/10.1038/s41572-020-00228-z
  • Evans, J., Salamonsen, L. A., Winship, A., Menkhorst, E., Nie, G., Gargett, C. E., & Dimitriadis, E. (2016). Fertile ground: human endometrial programming and lessons in health and disease. Nature Reviews. Endocrinology, 12(11), 654–667. https://doi.org/10.1038/nrendo.2016.116
  • Gal, A., Pollack, A., & Oliver, M. (1984). Ocular findings in the acquired immunodeficiency syndrome. The British Journal of Ophthalmology, 68(4), 238–241. https://doi.org/10.1136/bjo.68.4.238
  • Gellersen, B., & Brosens, J. (2003). Cyclic AMP and progesterone receptor cross-talk in human endometrium: a decidualizing affair. The Journal of Endocrinology, 178(3), 357–372. https://doi.org/10.1677/joe.0.1780357
  • Gellersen, B., & Brosens, J. J. (2014). Cyclic decidualization of the human endometrium in reproductive health and failure. Endocrine Reviews, 35(6), 851–905. https://doi.org/10.1210/er.2014-1045
  • Gellersen, B., Brosens, I. A., & Brosens, J. J. (2007). Decidualization of the human endometrium: mechanisms, functions, and clinical perspectives. Seminars in Reproductive Medicine, 25(6), 445–453. https://doi.org/10.1055/s-2007-991042
  • Gene Ontology Consortium. (2008). The Gene Ontology project in 2008. Nucleic Acids Research, 36(Database issue), D440–D444. https://doi.org/10.1093/nar/gkm883
  • Guo, Q., Zhang, H., Zhao, X., Fu, Y., Zhang, J., & Li, M. (2014). Loss of expressions of Dusp6, Sprouty4, and Sef, negative regulators of FGF2/ERK1/2 signaling, in the endometrium of women with adenomyosis. International Journal of Gynecological Pathology: official Journal of the International Society of Gynecological Pathologists, 33(3), 288–297. https://doi.org/10.1097/PGP.0b013e3182a54ab3
  • Haas, D. M., Hathaway, T. J., & Ramsey, P. S. (2018). Progestogen for preventing miscarriage. The Cochrane Database of Systematic Reviews, 10, CD003511. https://doi.org/10.1002/14651858.CD003511.pub3
  • Herce, H. D., Deng, W., Helma, J., Leonhardt, H., & Cardoso, M. C. (2013). Visualization and targeted disruption of protein interactions in living cells. Nature Communications, 4, 2660 https://doi.org/10.1038/ncomms3660
  • Kanehisa, M., & Goto, S. (2000). KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Research, 28(1), 27–30. https://doi.org/10.1093/nar/28.1.27
  • Liu, Y., Chen, H., Feng, L., & Zhang, J. (2021). Interactions between gut microbiota and metabolites modulate cytokine network imbalances in women with unexplained miscarriage. NPJ Biofilms and Microbiomes, 7(1), 24. https://doi.org/10.1038/s41522-021-00199-3
  • Maddirevula, S., Awartani, K., Coskun, S., AlNaim, L. F., Ibrahim, N., Abdulwahab, F., Hashem, M., Alhassan, S., & Alkuraya, F. S. (2020). A genomics approach to females with infertility and recurrent pregnancy loss. Human Genetics, 139(5), 605–613. https://doi.org/10.1007/s00439-020-02143-5
  • McCallie, B. R., Parks, J. C., Trahan, G. D., Jones, K. L., Coate, B. D., Griffin, D. K., Schoolcraft, W. B., & Katz-Jaffe, M. G. (2019). Compromised global embryonic transcriptome associated with advanced maternal age. Journal of Assisted Reproduction and Genetics, 36(5), 915–924. https://doi.org/10.1007/s10815-019-01438-5
  • Pijnenborg, R., Dixon, G., Robertson, W. B., & Brosens, I. (1980). Trophoblastic invasion of human decidua from 8 to 18 weeks of pregnancy. Placenta, 1(1), 3–19. https://doi.org/10.1016/S0143-4004(80)80012-9
  • Practice Committee of the American Society for Reproductive Medicine. (2013). Definitions of infertility and recurrent pregnancy loss: a committee opinion. Fertility and Sterility, 99(1), 63. https://doi.org/10.1016/j.fertnstert.2012.09.023
  • Rai, R., & Regan, L. (2006). Recurrent miscarriage. Lancet (London, England), 368(9535), 601–611. https://doi.org/10.1016/S0140-6736(06)69204-0
  • Salker, M. S., Christian, M., Steel, J. H., Nautiyal, J., Lavery, S., Trew, G., Webster, Z., Al-Sabbagh, M., Puchchakayala, G., Föller, M., Landles, C., Sharkey, A. M., Quenby, S., Aplin, J. D., Regan, L., Lang, F., & Brosens, J. J. (2011). Deregulation of the serum- and glucocorticoid-inducible kinase SGK1 in the endometrium causes reproductive failure. Nature Medicine, 17(11), 1509–1513. https://doi.org/10.1038/nm.2498
  • Scott, N. A., & Mann, E. R. (2020). Regulation of mononuclear phagocyte function by the microbiota at mucosal sites. Immunology, 159(1), 26–38. https://doi.org/10.1111/imm.13155
  • Siebel, C., & Lendahl, U. (2017). Notch Signaling in Development, Tissue Homeostasis, and Disease. Physiological Reviews, 97(4), 1235–1294. https://doi.org/10.1152/physrev.00005.2017
  • Smyth, G. K. (2005). limma: Linear Models for Microarray Data. In: Gentleman R., Carey V.J., Huber W., Irizarry R.A., Dudoit S. (eds) Bioinformatics and Computational Biology Solutions Using R and Bioconductor. Statistics for Biology and Health. pp. 397–420. Springer. https://doi.org/10.1007/0-387-29362-0_23
  • Strug, M. R., Su, R. W., Kim, T. H., Jeong, J. W., & Fazleabas, A. (2019). The Notch Family Transcription Factor, RBPJκ, Modulates Glucose Transporter and Ovarian Steroid Hormone Receptor Expression During Decidualization. Reproductive Sciences (Thousand Oaks, Calif.), 26(6), 774–784. https://doi.org/10.1177/1933719118799209
  • Youssef, A., Vermeulen, N., Lashley, E., Goddijn, M., & van der Hoorn, M. (2019). Comparison and appraisal of (inter)national recurrent pregnancy loss guidelines. Reproductive Biomedicine Online, 39(3), 497–503. https://doi.org/10.1016/j.rbmo.2019.04.008
  • Zhang, D., Yang, Y., Liang, C., Liu, J., Wang, H., Liu, S., & Yan, Q. (2019). poFUT1 promotes uterine angiogenesis and vascular remodeling via enhancing the O-fucosylation on uPA. Cell Death & Disease, 10(10), 775. https://doi.org/10.1038/s41419-019-2005-3
  • Zhang, S., Kong, S., Wang, B., Cheng, X., Chen, Y., Wu, W., Wang, Q., Shi, J., Zhang, Y., Wang, S., Lu, J., Lydon, J. P., DeMayo, F., Pear, W. S., Han, H., Lin, H., Li, L., Wang, H., Wang, Y.-L., … Wang, H. (2014). Uterine Rbpj is required for embryonic-uterine orientation and decidual remodeling via Notch pathway-independent and -dependent mechanisms. Cell Research, 24(8), 925–942. https://doi.org/10.1038/cr.2014.82

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.