280
Views
14
CrossRef citations to date
0
Altmetric
Articles

Genetic diversity in shea tree (Vitellaria paradoxa subspecies nilotica) ethno-varieties in Uganda assessed with microsatellite markers

, , , , , & show all

References

  • Allal F, Sanou H, Millet L, Vaillant A, Camus-Kulandaivelu L, Logossa ZA, Lefevre F, Bouvet JM. 2011. Past climate changes explain the phylogeography of Vitellaria paradoxa over Africa. Heredity. 107(2):174–186.
  • Allal F, Vaillant A, Sanou H, Kelly B, Bouvet JM. 2008. Isolation and characterization of new microsatellite markers in shea tree (Vitellaria paradoxa C.F. Gaertn). Mol Ecol Resour. 8(4):822–824.
  • Assogbadjo AE, Kyndt T, Chadare FJ, Sinsin B, Gheysen G, Eyog-Matig O, Van Damme P. 2009. Genetic fingerprinting using AFLP cannot distinguish traditionally classified baobab morphotypes. Agroforest Syst. 75:157–165.
  • Assogbadjo AE, Kyndt T, Sinsin B, Gheysen G, van damme P. 2006. Patterns of genetic and morphometric diversity in Baobab (Adansonia digitata) populations across different climatic zones of Benin (West Africa). Ann Bot. 97:819–830.
  • Barton NH, Slatkin M. 1986. A Quasi-equilibrium theory of the distribution of rare alleles in a subdivided population. Heredity. 56:409–415.
  • Botsten D, White RL, Skolnick M, Davis RW. 1980. Construction of a genetic linkage map in man using Restriction Fragment Length Polymorphisms. Am J Hum Genet. 32(3):314–331.
  • Bouvet JM, Fontaine C, Sanou H, Cardi C. 2004. An analysis of the pattern of genetic variation in Vitellaria paradoxa using RAPD markers. Agroforest Syst. 60(1):61–69.
  • Coulon A, Fitzpatrick JW, Bowman R, Stith BM, Makarewich CA, Stenzler LM, Lovette IJ. 2008. Congruent population structure inferred from dispersal behaviour and intensive genetic surveys of the threatened Florida scrub-jay (Aphelocoma coerulescens). Mol Ecol. 17:1685–1701.
  • De Smedt S, Alaerts K, Kouyaté A, Van Damme P, Potters G, Samson R. 2011. Phenotypic variation of baobab (Adansonia digitata L.) fruit traits in Mali. Agroforest Syst. 82(1):87–97.
  • Excoffier L, Lischer HEL. 2010. Arlequin suite ver 3.5: A new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour. 10(3):564–567.
  • Fares K, Guasmi F, Touil L, Triki T, Ferchichi A. 2009. Genetic diversity of Pistachio tree using Inter-Simple Sequence Repeat markers (ISSR) supported by morphological and chemical markers. Biotechnology. 8:24–34.
  • Guillot G, Estoup A, Mortier F, Cosson JF. 2005. A spatial statistical model for landscape genetics. Genetics. 170:1261–1280.
  • Gwali S, Okullo JBL, Eilu G, Nakabonge G, Nyeko P, Vuzi P. 2011. Folk classification of shea butter tree (Vitellaria paradoxa subsp. nilotica) ethno-varieties in Uganda. Ethnobot Res Appl. 9:243–256.
  • Gwali S, Okullo JBL, Eilu G, Nakabonge G, Nyeko P, Vuzi P. 2012. Traditional management and conservation of shea trees (Vitellaria paradoxa subspecies nilotica) in Uganda. Environ Dev Sustain. 14(3):347–363.
  • Gwali S, Nakabonge G, Okullo JBL, Eilu G, Forestier-Chiron N, Piombo G, Davrieux F. 2012. Fat content and fatty acid profiles of shea tree (Vitellaria paradoxa subspecies nilotica) ethno-varieties in Uganda. For Trees Live. 21(4):267–278.
  • Hall JB, Aebischer DP, Tomlison HF, Osei-Amaning E, Hindle JR. 1996. Vitellaria paradoxa: a monograph. Bangor: School of Agricultural and Forest Sciences, University of Wales.
  • Houehanou TD, Kindomihou V, Stevart T, Tente B, Houinato M, Sinsin B. 2013. Variation of Loranthaceae impact on Vitellaria paradoxa C.F. Gaertn. fruit yield in contrasting habitats and implications for its conservation. Fruits. 68(2):109–120.
  • Kashkush K, Jinggui F, Tomer E, Hillel J, Lavi U. 2001. Cultivar identification and genetic map of mango (Mangifera indica). Euphytica. 122(1):129–136.
  • Kebede M, Ehrich D, Taberlet P, Nemomissa S, Brochmann C. 2007. Phylogeography and conservation genetics of a giant lobelia (Lobelia giberroa) in Ethiopian and tropical East African mountains. Mol Ecol. 16:1233–1243.
  • Kelly BA, Hardy OJ, Bouvet JM. 2004. Temporal and spatial genetic structure in Vitellaria paradoxa (shea tree) in an agroforestry system in southern Mali. Mol Ecol. 13(5):1231–1240.
  • Ky CL, Barre P, Lorieux M, Trouslot P, Akaffou S, Louarn J, Charrier A, Hamon S, Noirot M. 2000. Interspecific genetic linkage map, segregation distortion and genetic conversion in coffee (Coffea sp.). Theor Appl Genet. 101:669–676.
  • Langdale-Brown I, Osmaston H, Wilson J. 1964. The vegetation of Uganda and its bearing on land use. Entebbe: Government Printer.
  • Lewis PO, Zaykin D. 2001. Genetic Data Analysis: Computer program for the analysis of allelic data. Version 1.0 (d16c). http://www.eeb.uconn.edu/people/plewis/software.php.
  • Lovett PN, Haq N. 2000. Diversity of the Sheanut tree (Vitellaria paradoxa C.F. Gaertn.) in Ghana. Genet Resour Crop Ev. 47(3):293–304.
  • Maranz S, Wiesman Z. 2003. Evidence for indigenous selection and distribution of the shea tree, Vitellaria paradoxa, and its potential significance to prevailing parkland savanna tree patterns in sub-Saharan Africa north of the equator. J Biogeogr. 30(10):1505–1516.
  • Mulumba JW, Nyakana S, Jamnadass R. 2012. Genetic diversity and structure of Acacia senegal (L.) Willd. in Uganda. Int J Bot. 8(3):107–116.
  • Nei M. 1978. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics. 89:583–590.
  • NEMA. 1996. State of the Environment Report for Uganda 1996. Kampala: National Environment Management Authority.
  • Nyadoi P. 2005. Population structure and socio-economic importance of Tamarindus indica in Tharaka district, eastern Kenya [MSc thesis]. Kampala, Uganda: Makerere University. 110 pp.
  • Ouinsavi C, Sokpon N, Khasa DP. 2009. Genetic diversity and population structure of a threatened African tree species, Milicia excelsa, using nuclear microsatellites DNA markers. Int J For Res. doi:10.1155/2009/210179.
  • Page RDM. 1996. TREEVIEW: An application to display phylogenetic trees on personal computers. Comput Appl Biosci. 12:357–358.
  • Perrie LR, Brownsey PJ. 2005. Genetic variation is not concordant with morphological variation in the fern Asplenium hookerianum sensu lato (Aspleniaceae). Am J Bot. 92(9):1559–1564.
  • Perrier X, Jacquemoud-Collet JP. 2006. DARwin software 5.0 edition. http://darwin.cirad.fr/darwin.
  • Rekik I, Salimonti A, Kamoun NG, Muzzalupo I, Lepais O, Gerber S, Perri E, Rebai A. 2008. Characterization and identification of Tunisian olive tree varieties by microsatellite markers. HortScience. 43(5):1371–1376.
  • Rousset F. 2008. GENEPOP’007: a complete re-implementation of the GENEPOP software for Windows and Linux. Mol Ecol Resour. 8(1):103–106.
  • Sanou H, Lamien N. 2011. Vitellaria paradoxa (shea butter tree): conservation and sustainable use of genetic resources of priority food tree species in sub-Saharan Africa. Rome: Bioversity International.
  • Sanou H, Picard N, Lovett PN, Dembélé M, Korbo A, Diarisso D, Bouvet JM. 2006. Phenotypic variation of agromorphological traits of the shea tree, Vitellaria paradoxa C.F. Gaertn., in Mali. Genet Resour Crop Ev. 53(1):145–161.
  • Sturges P. 2008. Information and communication in bandit country: an exploratory study of civil conflict in northern Uganda (1986–2007). Info Dev. 24(3):204–212.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.