Ex situ bioremediation of diesel fuel-contaminated soil in two different climates

References

• Agnihotri R, Gujre N, Mitra S, Sharma MP. 2023. Decoding the PLFA profiling of microbial community structure in soils contaminated with municipal solid wastes. Environ Res. 219:114993. doi:10.1016/j.envres.2022.114993.
   PubMedGoogle Scholar
• Azubuike CC, Chikere CB, Okpokwasili GC. 2016. Bioremediation techniques–classification based on site of application: principles, advantages, limitations and prospects. World J Microbiol Biotechnol. 32(11):180. doi:10.1007/s11274-016-2137-x.
   PubMed Web of Science ®Google Scholar
• Balseiro-Romero M, Monterroso C, Casares JJ. 2018. Environmental fate of petroleum hydrocarbons in soil: review of multiphase transport, mass transfer, and natural attenuation processes. Pedosphere. 28(6):833–847. doi:10.1016/S1002-0160(18)60046-3.
   Web of Science ®Google Scholar
• Bligh EG, Dyer WJ. 1959. A rapid method of total lipid extraction and purification. Can J Biochem Physiol. 37(8):911–917. doi:10.1139/o59-099.
   PubMedGoogle Scholar
• Bloem J, Hopkins D, Benedetti A. 2006. Microbiological methods for assessing soil quality. Wallingford: CABI.
   Google Scholar
• Covino S, Fabianová T, Křesinová Z, Čvančarová M, Burianová E, Filipová A, Vořísková J, Baldrian P, Cajthaml T. 2016. Polycyclic aromatic hydrocarbons degradation and microbial community shifts during co-composting of creosote-treated wood. J Hazard Mater. 301:17–26. doi:10.1016/j.jhazmat.2015.08.023.
   PubMed Web of Science ®Google Scholar
• Darko O. 1996. Podnebni tipi v Sloveniji. Geografski vestnik. 68:39–56.
   Google Scholar
• Decree on burdening of soil with waste spreading Uradni list RS, št. 34/08 in 61/11. 2008. vol Uradni list RS, št. 34/08 in 61/11. Uradni list Republike Slovenije.
   Google Scholar
• Frostegård Å, Bååth E, Tunlio A. 1993. Shifts in the structure of soil microbial communities in limed forests as revealed by phospholipid fatty acid analysis. Soil Biology and Biochemistry. 25(6):723–730. doi:10.1016/0038-0717(93)90113-P.
   Web of Science ®Google Scholar
• Hedrick DB, Peacock A, White DC. 2005. Interpretation of fatty acid profiles of soil microorganisms. In: Margesin R, Schinner F, editors. Monitoring and assessing soil bioremediation. Berlin, Heidelberg: Springer Berlin Heidelberg; p. 251–259. doi:10.1007/3-540-28904-6_12.
   Google Scholar
• Hoang SA, Lamb D, Seshadri B, Sarkar B, Cheng Y, Wang L, Bolan NS. 2021. Petroleum hydrocarbon rhizoremediation and soil microbial activity improvement via cluster root formation by wild proteaceae plant species. Chemosphere. 275:130135. doi:10.1016/j.chemosphere.2021.130135.
   PubMed Web of Science ®Google Scholar
• Hoang SA, Lamb D, Seshadri B, Sarkar B, Choppala G, Kirkham MB, Bolan NS. 2021. Rhizoremediation as a green technology for the remediation of petroleum hydrocarbon-contaminated soils. J Hazard Mater. 401:123282. doi:10.1016/j.jhazmat.2020.123282.
   PubMed Web of Science ®Google Scholar
• Johnsen AR, Boe US, Henriksen P, Malmquist LMV, Christensen JH. 2021. Full-scale bioremediation of diesel-polluted soil in an Arctic landfarm. Environ Pollut. 280:116946. doi:10.1016/j.envpol.2021.116946.
   PubMed Web of Science ®Google Scholar
• Kafle A, Timilsina A, Gautam A, Adhikari K, Bhattarai A, Aryal N. 2022. Phytoremediation: mechanisms, plant selection and enhancement by natural and synthetic agents. Environ Adv. 8:100203. doi:10.1016/j.envadv.2022.100203.
   Google Scholar
• Kästner M, Miltner A. 2016. Application of compost for effective bioremediation of organic contaminants and pollutants in soil. Appl Microbiol Biotechnol. 100(8):3433–3449. doi:10.1007/s00253-016-7378-y.
   PubMed Web of Science ®Google Scholar
• Kozjek K, Dolinar M, Skok G. 2017. Objective climate classification of Slovenia. Int J Climatol. 37(S1):848–860. doi:10.1002/joc.5042.
   Google Scholar
• Langarica-Fuentes A, Zafar U, Heyworth A, Brown T, Fox G, Robson GD. 2014. Fungal succession in an in-vessel composting system characterized using 454 pyrosequencing. FEMS Microbiol Ecol. 88(2):296–308. doi:10.1111/1574-6941.12293.
   PubMed Web of Science ®Google Scholar
• Li X, Fan F, Zhang B, Zhang K, Chen B. 2018. Biosurfactant enhanced soil bioremediation of petroleum hydrocarbons: design of experiments (DOE) based system optimization and phospholipid fatty acid (PLFA) based microbial community analysis. Int Biodeterior Biodegrad. 132:216–225. doi:10.1016/j.ibiod.2018.04.009.
   Web of Science ®Google Scholar
• Lopez-Echartea E, Strejcek M, Mukherjee S, Uhlik O, Yrjälä K. 2020. Bacterial succession in oil-contaminated soil under phytoremediation with poplars. Chemosphere. 243:125242. doi:10.1016/j.chemosphere.2019.125242.
   PubMed Web of Science ®Google Scholar
• Margesin R, Hämmerle M, Tscherko D. 2007. Microbial activity and community composition during bioremediation of diesel-oil-contaminated soil: effects of hydrocarbon concentration, fertilizers, and incubation time. Microb Ecol. 53(2):259–269. doi:10.1007/s00248-006-9136-7.
   PubMed Web of Science ®Google Scholar
• Miller JN, Miller JC. 2018. Statistics and chemometrics for analytical chemistry. 7th ed. Harlow: Pearson.
   Google Scholar
• MOP. 2013. Decree on the treatment of biodegradable waste and the use of compost or digestate. (Uradni list RS, št. 99/13, 56/15, 56/18 in 44/22 – ZVO-2). doi:http://www.pisrs.si/Pis.web/pregledPredpisa?id=URED6281.
   Google Scholar
• MOP. 2019. Rules on soil quality monitoring. (Uradni list RS, št. 68/19 in 44/22 – ZVO-2) doi:http://www.pisrs.si/Pis.web/pregledPredpisa?id=PRAV12716.
   Google Scholar
• Nakase G, Eguchi M. 2015. Influence of seasonal solar ultraviolet radiation on microbial mineralization activity in tidal flats in Osaka Bay, Japan. Fish Sci. 81(6):1099–1104. doi:10.1007/s12562-015-0927-y.
   Web of Science ®Google Scholar
• Orwin KH, Dickie IA, Holdaway R, Wood JR. 2018. A comparison of the ability of PLFA and 16S rRNA gene metabarcoding to resolve soil community change and predict ecosystem functions. Soil Biology and Biochemistry. 117:27–35. doi:10.1016/j.soilbio.2017.10.036.
   Web of Science ®Google Scholar
• Ossai IC, Ahmed A, Hassan A, Hamid FS. 2020. Remediation of soil and water contaminated with petroleum hydrocarbon: a review. Environ Technol Innov. 17:100526. doi:10.1016/j.eti.2019.100526.
   Web of Science ®Google Scholar
• Ridl J, Kolar M, Strejcek M, Strnad H, Stursa P, Paces J, Macek T, Uhlik O. 2016. Plants rather than mineral fertilization shape microbial community structure and functional potential in legacy contaminated soil. Front Microbiol. 7:995–995. doi:10.3389/fmicb.2016.00995.
   PubMed Web of Science ®Google Scholar
• Rodriguez-Campos J, Perales-Garcia A, Hernandez-Carballo J, Martinez-Rabelo F, Hernández-Castellanos B, Barois I, Contreras-Ramos SM. 2019. Bioremediation of soil contaminated by hydrocarbons with the combination of three technologies: bioaugmentation, phytoremediation, and vermiremediation. J Soils Sediments. 19(4):1981–1994. doi:10.1007/s11368-018-2213-y.
   Web of Science ®Google Scholar
• Saravanan A, Jeevanantham S, Narayanan VA, Kumar PS, Yaashikaa PR, Muthu CMM. 2020. Rhizoremediation – a promising tool for the removal of soil contaminants: a review. J Environ Chem Eng. 8(2):103543. doi:10.1016/j.jece.2019.103543.
   Web of Science ®Google Scholar
• Shen W, Zhu N, Cui J, Wang H, Dang Z, Wu P, Luo Y, Shi C. 2016. Ecotoxicity monitoring and bioindicator screening of oil-contaminated soil during bioremediation. Ecotoxicol Environ Saf. 124:120–128. doi:10.1016/j.ecoenv.2015.10.005.
   PubMed Web of Science ®Google Scholar
• Stegmann R, Brunner G, Calmano W, Matz G. 2001. Treatment of contaminated soil: fundamentals, analysis, applications. Cham: Springer. doi:10.1007/978-3-662-04643-2.
   Google Scholar
• Suding KN, Gross KL, Houseman GR. 2004. Alternative states and positive feedbacks in restoration ecology. Trends Ecol Evol. 19(1):46–53. doi:10.1016/j.tree.2003.10.005.
   PubMed Web of Science ®Google Scholar
• Tischer S, Hübner T. 2002. Model trials for phytoremediation of hydrocarbon-contaminated sites by the use of different plant species. Int J Phytoremediation. 4(3):187–203. doi:10.1080/15226510208500082.
   Web of Science ®Google Scholar
• Tran H-T, Lin C, Bui X-T, Ngo H-H, Cheruiyot NK, Hoang H-G, Vu C-T. 2021. Aerobic composting remediation of petroleum hydrocarbon-contaminated soil. Current and future perspectives. Sci Total Environ. 753:142250. doi:10.1016/j.scitotenv.2020.142250.
   PubMed Web of Science ®Google Scholar
• Vasilyeva G, Kondrashina V, Strijakova E, Ortega-Calvo J-J. 2020. Adsorptive bioremediation of soil highly contaminated with crude oil. Sci Total Environ. 706:135739. doi:10.1016/j.scitotenv.2019.135739.
   PubMed Web of Science ®Google Scholar
• Vrščaj B, Repe B, Simončič P. 2017. The soils of Slovenia. Cham: Springer. doi:10.1007/978-94-017-8585-3.
   Google Scholar
• Willers C, Jansen van Rensburg PJ, Claassens S. 2015a. Microbial signature lipid biomarker analysis - an approach that is still preferred, even amid various method modifications. J Appl Microbiol. 118(6):1251–1263. doi:10.1111/jam.12798.
   PubMed Web of Science ®Google Scholar
• Willers C, Jansen van Rensburg PJ, Claassens S. 2015b. Phospholipid fatty acid profiling of microbial communities–a review of interpretations and recent applications. J Appl Microbiol. 119(5):1207–1218. doi:10.1111/jam.12902.
   PubMed Web of Science ®Google Scholar
• Wu M, Li W, Dick WA, Ye X, Chen K, Kost D, Chen L. 2017. Bioremediation of hydrocarbon degradation in a petroleum-contaminated soil and microbial population and activity determination. Chemosphere. 169:124–130. doi:10.1016/j.chemosphere.2016.11.059.
   PubMed Web of Science ®Google Scholar
• Xu X, Liu W, Tian S, Wang W, Qi Q, Jiang P, Gao X, Li F, Li H, Yu H. 2018. Petroleum hydrocarbon-degrading bacteria for the remediation of oil pollution under aerobic conditions: a perspective analysis. Front Microbiol. 9(:2885. doi:10.3389/fmicb.2018.02885.
   PubMed Web of Science ®Google Scholar
• Yanxu W, Oyaizu H. 2009. Evaluation of the phytoremediation potential of four plant species for dibenzofuran-contaminated soil. J Hazard Mater. 168(2–3):760–764. doi:10.1016/j.jhazmat.2009.02.082.
   PubMed Web of Science ®Google Scholar
• Zhang Y, Zheng N, Wang J, Yao H, Qiu Q, Chapman SJ. 2019. High turnover rate of free phospholipids in soil confirms the classic hypothesis of PLFA methodology. Soil Biol Biochem. 135:323–330. doi:10.1016/j.soilbio.2019.05.023.
   Web of Science ®Google Scholar