116
Views
3
CrossRef citations to date
0
Altmetric
Original Articles

DNA Labelling Topologies for Monitoring DNA-Protein Complex Formation by Fluorescence Anisotropy

, , &
Pages 1581-1584 | Published online: 05 Dec 2007

REFERENCES

  • Lakowicz , J. R. 1999 . Principles of Fluorescence Spectroscopy, , 2nd ed. , 291 – 319 . New York : Kluwer Academic & Plenum Publishers .
  • Norman , D. G. , Grainger , R. J. , Uhrín , D. and Lilley , D. M.J. 2000 . Location of cyanine-3 on double-stranded DNA: Importance for fluorescence resonance energy transfer studies . Biochemistry , 39 : 6317 – 6324 .
  • Moreira , B. G. , You , Y. , Behlke , M. A. and Owczarzy , R. 2005 . Effects of fluorescent dyes, quenchers and dangling ends on DNA duplex stability . Biochem. Biophys. Res. Commun. , 327 : 473 – 484 .
  • Unruh , J. R. , Gokulrangan , G. , Lushington , G. H. , Johnson , C. K. and Wilson , G. S. 2005 . Orientational dynamics and dye-DNA interactions in a dye-labeled DNA aptamer . Biophys. J. , 88 : 3455 – 3465 .
  • Gokulrangan , G. , Unruh , J. R. , Holub , D. F. , Ingram , B. , Johnson , C. K. and Wilson , G. S. 2005 . DNA aptamer-based bioanalysis of IgE by fluorescence anisotropy . Anal. Chem. , 77 : 1963 – 1970 .
  • Nazarenko , I. , Pires , R. , Lowe , B. , Obaidy , M. and Rashtchian , A. 2002 . Effect of primary and secondary structure of oligodeoxyribonucleotides on the fluorescent properties of conjugated dyes . Nucleic Acids Res. , 30 : 2089 – 2095 .
  • Su , T.-J. , Tock , M. R. , Egelhaaf , S. U. , Poon , W. C.K. and Dryden , D. T.F. 2005 . DNA bending by M.EcoKI methyltransferase is coupled to nucleotide flipping . Nucleic Acids Res. , 33 : 3235 – 3244 .
  • Allan , B. W. , Reich , N. O. and Beechem , J. M. 1999 . Measurement of the absolute temporal coupling between DNA binding and base flipping . Biochemistry , 38 : 5308 – 5314 .
  • Reid , S. L. , Parry , D. , Liu , H.-H. and Connolly , B. A. 2001 . Binding and recognition of GATATC target sequences by the EcoRV restriction endonuclease: A study using fluorescent oligonucleotides and fluorescence polarization . Biochemistry , 40 : 2484 – 2494 .
  • Wang , X. and Krull , U. J. 2005 . Synthesis and fluorescence studies of thiazole orange tethered onto oligonucleotide: Development of a self-contained DNA biosensor on a fiber optic surface . Bioorg. Med. Chem. Lett. , 15 : 1725 – 1729 .
  • Kool , E. T. 2002 . Replacing the nuclebases in DNA with designer molecules . Acc. Chem. Res. , 35 : 936 – 943 .
  • Goedecke , K. , Pignot , M. , Goody , R. S. , Scheidig , A. J. and Weinhold , E. 2001 . Structure of the N6-adenine DNA methyltransferase M.TaqI in complex with DNA and a cofactor analog . Nat. Struct. Biol. , 8 : 121 – 125 .
  • Huber , R. , Amann , N. and Wagenknecht , H.-A. 2004 . Synthesis of DNA with phenanthridinium as an artificial DNA base . J. Org. Chem. , 69 : 744 – 751 .

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.