RNA-seq analysis of testes from flurochloridone-treated rats

References

• Aits S, Jaattela M. 2013. Lysosomal cell death at a glance. J Cell Sci. 126:1905–1912.
   PubMed Web of Science ®Google Scholar
• Albuquerque AF, Ribeiro JS, Kummrow F, Nogueira AJ, Montagner CC, Umbuzeiro GA. 2016. Pesticides in Brazilian freshwaters: a critical review. Environ Sci Proc Imp. 18:779–787.
   PubMed Web of Science ®Google Scholar
• Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, et al. 2000. Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet. 25:25–29.
   PubMed Web of Science ®Google Scholar
• Devlin RM, Kisiel MJ, Kostusiak AS. 1979. Influence of R-40244 on pigment content of wheat and corn. Weed Res. 19:59–61.
   Web of Science ®Google Scholar
• European Food Safety Authority. 2010. Conclusion on the peer review of the pesticide risk assessment of the active substance flurochloridone (notified active substance). Parma (Italy): European Food Safety Authority.
   Google Scholar
• Fan S, Qi M, Yu Y, Li L, Yao G, Tashiro S, Onodera S, Ikejima T. 2012. P53 activation plays a crucial role in silibinin induced ROS generation via PUMA and JNK. Free Radic Res. 46:310–319.
   PubMed Web of Science ®Google Scholar
• Ha AD, Fung VS. 2012. Huntington's disease. Curr Opin Neurol. 25:491–498.
   PubMed Web of Science ®Google Scholar
• Hong B, Heuvel A, Prabhu V, Zhang S, El-Deiry W. 2014. Targeting tumor suppressor p53 for cancer therapy: strategies, challenges and opportunities. Curr Drug Targets. 15:80–89.
   PubMed Web of Science ®Google Scholar
• Jalmi SK, Sinha AK. 2015. ROS mediated MAPK signaling in abiotic and biotic stress-striking similarities and differences. Front Plant Sci. 6:769.
   PubMed Web of Science ®Google Scholar
• Ji N, Zhang S, Zhang Y, Chen Y. 2017. Health risk assessment of an abandoned herbicide factory site for transportation use in Dalian, China. Environ Sci Pollut Res. 24:24572–24583.
   PubMed Web of Science ®Google Scholar
• Jiang L, Hickman JH, Wang SJ, Gu W. 2015. Dynamic roles of p53-mediated metabolic activities in ROS-induced stress responses. Cell Cycle (Georgetown, Tex). 14:2881–2885.
   PubMed Web of Science ®Google Scholar
• Kanehisa M, Goto S. 2000. KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res. 28:27–30.
   PubMed Web of Science ®Google Scholar
• Kaya A, Yigit E. 2012. Interactions among glutathione s-transferase, glutathione reductase activity and glutathione contents in leaves of Vicia faba L. subjected to flurochloridone. Fresenius Environ Bull. 21.
   Web of Science ®Google Scholar
• Kelly DM, Jones TH. 2013. Testosterone: a metabolic hormone in health and disease. J Endocrinol. 217:R25–R45.
   PubMed Web of Science ®Google Scholar
• Li R, Zhou S, Zhu H, Zhang Z, Fang J, Liu P, Wang Y, Chang X, Zhang Y, Tang L. 2019. Low dose of flurochloridone affected reproductive system of male rats but not fertility and early embryonic development. Reprod Biol Endocrinol. 17:64.
   PubMed Web of Science ®Google Scholar
• Liu L, Chang X, Zhang Y, Wu C, Li R, Tang L, Zhou Z. 2018. Fluorochloridone induces primary cultured Sertoli cells apoptosis: Involvement of ROS and intracellular calcium ions-mediated ERK1/2 activation. Toxicol In Vitro 47:228–237.
   PubMed Web of Science ®Google Scholar
• Liu L, Zhang Y, Chang X, Li R, Wu C, Tang L, Zhou Z. 2018. Fluorochloridone perturbs blood-testis barrier/Sertoli cell barrier function through Arp3-mediated F-actin disruption. Toxicol Lett. 295:277–287.
   PubMed Web of Science ®Google Scholar
• Lushchak VI, Matviishyn TM, Husak VV, Storey JM, Storey KB. 2018. Pesticide toxicity: a mechanistic approach. Excli J. 17:1101–1136.
   PubMed Web of Science ®Google Scholar
• Mccolgan P, Tabrizi SJ. 2010. Huntington's disease: a clinical review. Orphanet J Rare Dis. 5:40.
   PubMed Web of Science ®Google Scholar
• Nikoloff N, Larramendy ML, Soloneski S. 2014a. Assessment of DNA damage, cytotoxicity, and apoptosis in human hepatoma (HepG2) cells after flurochloridone herbicide exposure. Food Chem Toxicol. 65:233–241.
   PubMed Web of Science ®Google Scholar
• Nikoloff N, Larramendy ML, Soloneski S. 2014b. Comparative evaluation in vitro of the herbicide flurochloridone by cytokinesis-block micronucleus cytome and comet assays. Environ Toxicol. 29:884–892.
   PubMed Web of Science ®Google Scholar
• Nikoloff N, Soloneski S, Larramendy ML. 2012. Genotoxic and cytotoxic evaluation of the herbicide flurochloridone on Chinese hamster ovary (CHO-K1) cells. Toxicol In Vitro 26:157–163.
   PubMed Web of Science ®Google Scholar
• Parrales A, Iwakuma T. 2015. Targeting oncogenic mutant p53 for cancer therapy. Front Oncol. 5:288.
   PubMed Web of Science ®Google Scholar
• Peterson MA, Collavo A, Ovejero R, Shivrain V, Walsh MJ. 2018. The challenge of herbicide resistance around the world: a current summary. Pest Manag Sci. 74:2246–2259.
   PubMed Web of Science ®Google Scholar
• Qian X, Ba Y, Zhuang Q, Zhong G. 2014. RNA-seq technology and its application in fish transcriptomics. Omics 18:98–110.
   PubMed Web of Science ®Google Scholar
• Qiang S. 2017. Preface to the special issue: herbicide toxicology in China. Pesticide Biochem Physiol. 143:199–200.
   PubMed Web of Science ®Google Scholar
• Qing T, Yu Y, Du T, Shi L. 2013. mRNA enrichment protocols determine the quantification characteristics of external RNA spike-in controls in RNA-seq studies. Sci China Life Sci. 56:134–142.
   PubMed Web of Science ®Google Scholar
• Ribeiro SA, D'Ambrosio MV, Vale RD. 2014. Induction of focal adhesions and motility in Drosophila S2 cells. MBoC. 25:3861–3869.
   Web of Science ®Google Scholar
• Shi J, Sun B, Shi W, Zuo H, Cui D, Ni L, Chen J. 2015. Decreasing GSH and increasing ROS in chemosensitivity gliomas with IDH1 mutation. Tumor Biol. 36:655–662.
   PubMed Web of Science ®Google Scholar
• Shi J, Xie C, Liu H, Krausz KW, Bewley CA, Zhang S, Tang L, Zhou Z, Gonzalez FJ. 2016. Metabolism and bioactivation of fluorochloridone, a novel selective herbicide, in vivo and in vitro. Environ Sci Technol. 50:9652–9660.
   PubMed Web of Science ®Google Scholar
• Soloneski S, Nikoloff N, Larramendy ML. 2016. Analysis of possible genotoxicity of the herbicide flurochloridone and its commercial formulations: Endo III and Fpg alkaline comet assays in Chinese hamster ovary (CHO-K1) cells. Mutat Res Genet Toxicol Environ Mutagen. 797:46–52.
   PubMed Web of Science ®Google Scholar
• Sun JT, Pan LL, Zhan Y, Tsang DC, Zhu LZ, Li XD. 2017. Atrazine contamination in agricultural soils from the Yangtze River Delta of China and associated health risks. Environ Geochem Health 39:369–378.
   PubMed Web of Science ®Google Scholar
• Team RC. 2012. R: a language and environment for statistical computing. Computing 1:12–21.
   Google Scholar
• Trapnell C, Roberts A, Goff L, Pertea G, Kim D, Kelley DR, Pimentel H, Salzberg SL, Rinn JL, Pachter L. 2012. Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks. Nat Protoc. 7:562–578.
   PubMed Web of Science ®Google Scholar
• Vijayakumaran R, Tan KH, Miranda PJ, Haupt S, Haupt Y. 2015. Regulation of mutant p53 protein expression. Front Oncol. 5:284.
   PubMed Web of Science ®Google Scholar
• Waris G, Ahsan H. 2006. Reactive oxygen species: role in the development of cancer and various chronic conditions. J Carcinog. 5:14.
   PubMedGoogle Scholar
• Wei J, Zhang X, Yu Y, Huang H, Li F, Xiang J. 2014. Comparative transcriptomic characterization of the early development in Pacific white shrimp Litopenaeus vannamei. PLoS One 9:e106201.
   PubMed Web of Science ®Google Scholar
• Yousofvand N, Zarei F, Ghanbari A. 2013. Exogenous testosterone, finasteride and castration effects on testosterone, insulin, zinc and chromium in adult male rats. Iran Biomed J. 17:49–53.
   PubMedGoogle Scholar
• Zhang S, Cheng X, Wang Y, Fan J, Li R, Zhou S, Liu S, Shi J, Sun J, Hu Y, et al. 2015. Ninety day toxicity and toxicokinetics of fluorochloridone after oral administration in rats. IJERPH. 12:4942–4966.
   Web of Science ®Google Scholar
• Zhu H, Li R, Zhou S, Zhang S, Wang Y, Liu S, Song Q, Chang X, Zhang Y, Liu L, et al. 2019. The oral NOAEL of flurochloridone in male Wistar rats in ninety-day subchronic toxicity test was 3 mg/kg/day. IJERPH. 16:553.
   Web of Science ®Google Scholar