2,392
Views
58
CrossRef citations to date
0
Altmetric
Extra View

Peroxisomal ACBD4 interacts with VAPB and promotes ER-peroxisome associations

, ORCID Icon, , ORCID Icon & ORCID Icon
Pages 1039-1045 | Received 27 Mar 2017, Accepted 27 Mar 2017, Published online: 05 May 2017

References

  • Schrader M, Godinho LF, Costello JL, Islinger M. The different facets of organelle interplay—an overview of organelle interactions. Front Cell Dev Biol 2015; 3:56; PMID:26442263; https://doi.org/10.3389/fcell.2015.00056
  • Novikoff A, Shin WY. The endoplasmic reticulum in the Golgi zone and its relation to microbodies, Golgi apparatus and autophagic vacuoles in rat liver cells. J Microsc 1964; 3:187–206
  • Yamamoto K, Fahimi HD. Three-dimensional reconstruction of a peroxisomal reticulum in regenerating rat liver: evidence of interconnections between heterogeneous segments. J Cell Biol 1987; 105:713–22; PMID:2887576; https://doi.org/10.1083/jcb.105.2.713
  • Dorninger F, Brodde A, Braverman NE, Moser AB, Just WW, Forss-Petter S, Brügger B, Berger J. Homeostasis of phospholipids - The level of phosphatidylethanolamine tightly adapts to changes in ethanolamine plasmalogens. Biochim Biophys Acta 2015; 1851:117–128; PMID:25463479; https://doi.org/10.1016/j.bbalip.2014.11.005
  • Wanders RJA, Waterham HR, Ferdinandusse S. Metabolic interplay between Peroxisomes and other subcellular organelles including mitochondria and the endoplasmic reticulum. Front Cell Dev Biol Front Cell Dev Biol 2016; 3:833383–9
  • Braverman NE, Raymond GV, Rizzo WB, Moser AB, Wilkinson ME, Stone EM, Steinberg SJ, Wangler MF, Rush ET, Hacia JG, et al. Peroxisome biogenesis disorders in the Zellweger spectrum: An overview of current diagnosis, clinical manifestations, and treatment guidelines. Mol Genet Metab 2016; 117:313–21; PMID:26750748; https://doi.org/10.1016/j.ymgme.2015.12.009
  • Braverman N, Steel G, Obie C, Moser A, Moser H, Gould SJ, Valle D. Human PEX7 encodes the peroxisomal PTS2 receptor and is responsible for rhizomelic chondrodysplasia punctata. Nat Genet 1997; 15:369–76; PMID:9090381; https://doi.org/10.1038/ng0497-369
  • Heikoop JC, Van Roermund CWT, Just WW, Ofman R, Schutgens RBH, Heymans HSA, Wanders RJA, Tager JM. Rhizomelic chondrodysplasia punctata. Deficiency of 3-oxoacyl-coenzyme A thiolase in peroxisomes and impaired processing of the enzyme. J Clin Invest 1990; 86:126–30; PMID:2365812; https://doi.org/10.1172/JCI114674
  • Motley AM, Brites P, Gerez L, Hogenhout E, Haasjes J, Benne R, Tabak HF, Wanders RJA, Waterham HR. Mutational spectrum in the PEX7 gene and functional analysis of mutant alleles in 78 patients with rhizomelic chondrodysplasia punctata type 1. Am J Hum Genet 2002; 70:612–24; PMID:11781871; https://doi.org/10.1086/338998
  • Hettema EH, Erdmann R, van der Klei IJ, Veenhuis M. Evolving models for peroxisome biogenesis. Curr Opin Cell Biol 2014; 29:25–30; PMID:24681485; https://doi.org/10.1016/j.ceb.2014.02.002
  • Rucktäschel R, Halbach A, Girzalsky W, Rottensteiner H, Erdmann R. De novo synthesis of peroxisomes upon mitochondrial targeting of Pex3p. Eur J Cell Biol 2010; 89:947–54; PMID:20655617; https://doi.org/10.1016/j.ejcb.2010.06.012
  • Sugiura A, Mattie S, Prudent J, McBride HM. Newly born peroxisomes are a hybrid of mitochondrial and ER-derived pre-peroxisomes. Nature 2017; 542:251–4; PMID:28146471; https://doi.org/10.1038/nature21375
  • Aranovich A, Hua R, Rutenberg AD, Kim PK. PEX16 contributes to peroxisome maintenance by constantly trafficking PEX3 via the ER. J Cell Sci 2014; 127:3675–86; PMID:25002403; https://doi.org/10.1242/jcs.146282
  • Raychaudhuri S, Prinz WA. Nonvesicular phospholipid transfer between peroxisomes and the endoplasmic reticulum. Proc Natl Acad Sci USA 2008; 105:15785–90; PMID:18836080; https://doi.org/10.1073/pnas.0808321105
  • Alpy F, Rousseau A, Schwab Y, Legueux F, Stoll I, Wendling C, Spiegelhalter C, Kessler P, Mathelin C, Rio MC, et al. STARD3 or STARD3NL and VAP form a novel molecular tether between late endosomes and the ER. J Cell Sci 2013; 126:5500–12; PMID:24105263; https://doi.org/10.1242/jcs.139295
  • Doghman-Bouguerra M, Lalli E. ER-mitochondria contacts find their FATE. Cell Cycle 2016; 15, 3159–3160; PMID:27579833; https://doi.org/10.1080/15384101.2016.1220720
  • Stoica R, De Vos KJ, Paillusson S, Mueller S, Sancho RM, Lau KF, Vizcay-Barrena G, Lin WL, Xu YF, Lewis J, et al. ER-mitochondria associations are regulated by the VAPB-PTPIP51 interaction and are disrupted by ALS/FTD-associated TDP-43. Nat Commun 2014; 5:3996; PMID:24893131
  • Eisenberg-Bord M, Shai N, Schuldiner M, Bohnert M. A Tether Is a Tether Is a Tether: Tethering at membrane contact sites. Dev Cell 2016; 39:395–409; PMID:27875684; https://doi.org/10.1016/j.devcel.2016.10.022
  • Murphy SE, Levine TP. VAP, a Versatile Access Point for the Endoplasmic Reticulum: Review and analysis of FFAT-like motifs in the VAPome. Biochim Biophys Acta Mol Cell Biol Lipids 2016; 8:952–61; https://doi.org/10.1016/j.bbalip.2016.02.009
  • Loewen CJR, Roy A, Levine TP. A conserved ER targeting motif in three families of lipid binding proteins and in Opi1p binds VAP. EMBO J 2003; 22:2025–35; PMID:12727870; https://doi.org/10.1093/emboj/cdg201
  • Gomez-Suaga P, Paillusson S, Stoica R, Noble W, Hanger DP, Miller CCJ. The ER-mitochondria tethering complex VAPB- PTPIP51 regulates autophagy. Curr Biol 2017; 27:371–85; PMID:28132811; https://doi.org/10.1016/j.cub.2016.12.038
  • Costello JL, Castro IG, Hacker C, Schrader TA, Metz J, Zeuschner D, Azadi AS, Godinho LF, Costina V, Findeisen P, et al. ACBD5 and VAPB mediate membrane associations between peroxisomes and the ER. J. Cell Biol 2017a; 216:331–42; https://doi.org/10.1083/jcb.201607055
  • Borgese N, Fasana E. Targeting pathways of C-tail-anchored proteins. Biochim Biophys Acta 2011; 1808:937–46; PMID:20646998; https://doi.org/10.1016/j.bbamem.2010.07.010
  • Costello JL, Castro IG, Camoes F, Schrader TA, McNeall D, Yang J, Giannopoulou EA, Gomes S, Pogenberg V, Bonekamp NA, et al. Predicting the targeting of tail-anchored proteins to subcellular compartments in mammalian cells. J Cell Sci 2017; pii: jcs.200204. [Epub ahead of print]; PMID: 28325759; https://doi.org/10.1242/jcs.200204
  • Neess D, Bek S, Engelsby H, Gallego SF, Færgeman NJ. Long-chain acyl-CoA esters in metabolism and signaling: Role of acyl-CoA binding proteins. Prog Lipid Res 2015; 59:1–25; PMID:25898985; https://doi.org/10.1016/j.plipres.2015.04.001
  • Halbach A, Landgraf C, Lorenzen S, Rosenkranz K, Volkmer-Engert R, Erdmann R, Rottensteiner H. Targeting of the tail-anchored peroxisomal membrane proteins PEX26 and PEX15 occurs through C-terminal PEX19-binding sites. J Cell Sci 2006; 119:2508–17; PMID:16763195; https://doi.org/10.1242/jcs.02979
  • Schrader M, Reuber BE, Morrell JC, Jimenez-sanchez G, Obie C, Stroh TA, Valle D, Schroer TA, Gould SJ. Expression of PEX11β mediates peroxisome proliferation in the absence of extracellular stimuli. J Biol Chem 1998; 273:29607–14; PMID:9792670; https://doi.org/10.1074/jbc.273.45.29607
  • Schrader TA, Islinger M, Schrader M. Detection and immunolabeling of peroxisomal proteins. Methods Mol Biol 2017; 1595:113–130; PMID:28409457; https://doi.org/10.1007/978-1-4939-6937-1_12
  • Palumbo V, Pellacani C, Heesom KJ, Rogala KB, Deane CM, Mottier-Pavie V, Gatti M, Bonaccorsi S, Wakefield JG. Misato controls mitotic microtubule generation by stabilizing the tubulin chaperone protein-1 complex. Curr Biol 2015; 25:1777–83; PMID:26096973; https://doi.org/10.1016/j.cub.2015.05.033
  • Schuldiner M, Zalckvar E. Incredibly close—A newly identified peroxisome-ER contact site in humans. J Cell Biol 2017; 216:287–9; PMID:28108527
  • Hua R, Cheng D, Coyaud E, Freeman S, Di Pietro E, Wang Y, Vissa A, Yip CM, Fairn GD, Braverman N, et al. VAPs and ACBD5 tether peroxisomes to the ER for peroxisome maintenance and lipid homeostasis. J Cell Biol 2017; 216:367–77; PMID:28108526
  • Abu-Safieh L, Alrashed M, Anazi S, Alkuraya H, Khan AO, Al-Owain M, Al-Zahrani J, Al-Abdi L, Hashem M, Al-Tarimi S, et al. Autozygome-guided exome sequencing in retinal dystrophy patients reveals pathogenetic mutations and novel candidate disease genes. Genome Res 2013; 23:236–47; PMID:23105016; https://doi.org/10.1101/gr.144105.112
  • Ferdinandusse S, Falkenberg K, Koster J, Mooyer P, Jones R, van Roermund C, Pizzino A, Schrader M, Wanders R, Vanderver A, et al. ACBD5 deficiency causes a defect in peroxisomal very long-chain fatty acid metabolism. J Med Genet 2016; pii: jmedgenet-2016-104132 [Epub ahead of print], PMID: 27799409; https://doi.org/10.1136/jmedgenet-2016-104132
  • Yagita Y, Shinohara K, Abe Y, Nakagawa K, Al-Owain M, Alkuraya FS, Fujiki Y. Deficiency of a Retinal Dystrophy Protein, Acyl-CoA Binding Domain-containing 5 (ACBD5), Impairs Peroxisomal β-oxidation of very-long-chain fatty acids. J Biol Chem 2017; 292:691–705; PMID:27899449; https://doi.org/10.1074/jbc.M116.760090
  • Baker A, Carrier DJ, Schaedler T, Waterham HR, Roermund CW, Theodoulou FL. Peroxisomal ABC transporters: functions and mechanism. Biochem Soc Trans 2015; 43:959–65; PMID:26517910; https://doi.org/10.1042/BST20150127
  • van Roermund CWT, Visser WF, Ijlst L, van Cruchten A, Boek M, Kulik W, Waterham HR, Wanders RJA. The human peroxisomal ABC half transporter ALDP functions as a homodimer and accepts acyl-CoA esters. FASEB J 2008; 22:4201–8; PMID:18757502; https://doi.org/10.1096/fj.08-110866
  • Geillon F, Gondcaille C, Raas Q, Dias AMM, Pecqueur D, Truntzer C, Lucchi G, Ducoroy P, Falson P, Savary S, et al. Peroxisomal ATP-binding cassette transporters form mainly tetramers. J Biol Chem 2017
  • Yang IS, Son H, Kim S, Kim S. {ISOexpresso}: a web-based platform for isoform-level expression analysis in human cancer. BMC Genomics 2016; 17:631; PMID:27519173; https://doi.org/10.1186/s12864-016-2852-6
  • Prinz WA. Bridging the gap : Membrane contact sites in signaling, metabolism, and organelle dynamics. 2014; 205:759–69
  • Bonekamp NA, Vormund K, Jacob R, Schrader M. Dynamin-like protein 1 at the Golgi complex: a novel component of the sorting/targeting machinery en route to the plasma membrane. Exp Cell Res 2010; 316:3454–67; PMID:20688057; https://doi.org/10.1016/j.yexcr.2010.07.020
  • Bonekamp NA, Islinger M, Lázaro MG, Schrader M. Cytochemical detection of peroxisomes and mitochondria. Methods Mol Biol 2013; 931:467–82; PMID:23027018