Resistance to Phakopsora pachyrhizi in Soybean PI 587905 Maps to the Rpp1 Locus and Exhibits Variable Dominance Associated with Plant Ontogeny

REFERENCES

• Akamatsu, H., N. Yamanaka, Y. Yamaoka, R. M. Soares, W. Morel, A. J. G. Ivancovich, A. N. Bogado, M. Kato, J. T. Yorinori, and K. Suenaga. 2013. Pathogenic diversity of soybean rust in Argentina, Brazil, and Paraguay. Journal General Plant Pathologists 79:28–40. doi:10.1007/s10327-012-0421-7.
   Web of Science ®Google Scholar
• Bernard, R. L., and C. R. Cremeens. 1988. Registration of ‘Williams 82’ soybean. Crop Science 28:1027–28.
   Web of Science ®Google Scholar
• Bromfield, K. R. 1984. Soybean rust. Monograph No. 11. St. Paul, MN: The American Phytopathological Society.
   Google Scholar
• Calvo, É. S., R. A. S. Kiihl, A. Garcia, A. Harada, and D. M. Hiromoto. 2008. Two major recessive soybean genes conferring soybean rust resistance. Crop Science 48:1350–54. doi:10.2135/cropsci2007.10.0589.
   Web of Science ®Google Scholar
• Chakraborty, N., J. Curley, R. D. Frederick, D. L. Hyten, R. L. Nelson, G. L. Hartman, and B. W. Diers. 2009. Mapping and confirmation of a new allele at Rpp1 from soybean PI 594538A conferring RB lesion type resistance to soybean rust. Crop Science 49:783–90. doi:10.2135/cropsci2008.06.0335.
   Web of Science ®Google Scholar
• Chen, H., S. Zhao, Z. Yang, A. Sha, Q. Wan, C. Zhang, L. Chen, S. Yuan, D. Qiu, S. Chen, Z. Shan, and X. Zhou. 2015. Genetic analysis and molecular mapping of resistance gene to Phakopsora pachyrhizi in soybean germplasm SX6907. Theoretical and Applied Genetics 128:733–43. doi:10.1007/s00122-015-2468-2.
   PubMed Web of Science ®Google Scholar
• Fehr, W. R., and C. E. Caviness. 1977. Stages of soybean development. Iowa Agric. Exp. Stn. Spec. Rep. 80. Ames, IA: Iowa State University.
   Google Scholar
• Garcia, A., É. S. Calvo, R. A. de Souza Kiihl, and E. R. de Souto. 2011. Evidence of a susceptible allele inverting the dominance of rust resistance in soybean. Crop Science 51:32–40. doi:10.2135/cropsci2010.01.0037.
   Web of Science ®Google Scholar
• Garcia, A., É. S. Calvo, R. A. Kiihl, A. Harada, D. M. Hiromoto, and L. G. E. Vieira. 2008. Molecular mapping of soybean rust (Phakopsora pachyrhizi) resistance genes: Discovery of a novel locus and alleles. Theoretical and Applied Genetics 117:545–53. doi:10.1007/s00122-008-0798-z.
   PubMed Web of Science ®Google Scholar
• Hartwig, E. E. 1986. Identification of a fourth major gene conferring resistance to soybean rust. Crop Science 26:1135–36. doi:10.2135/cropsci1986.0011183X002600060010x.
   Web of Science ®Google Scholar
• Hartwig, E. E., W. L. Barrentine, and C. J. Edwards Jr. 1980. Registration of Tracy-M soybeans. Crop Science 20:825. doi:10.2135/cropsci1980.0011183X002000060049x.
   Web of Science ®Google Scholar
• Hartwig, E. E., and K. R. Bromfield. 1983. Relationships among three genes conferring specific resistance to rust in soybeans. Crop Science 23:237–39. doi:10.2135/cropsci1983.0011183X002300020012x.
   Web of Science ®Google Scholar
• Hossain, M. M., H. Akamatsu, M. Morishita, T. Mori, Y. Yamaoka, K. Suenaga, R. M. Soares, A. N. Bogado, A. J. G. Ivancovich, and N. Yamanaka. 2015. Molecular mapping of Asian soybean rust resistance in soybean landraces PI 594767A, PI 587905, and PI 416764. Plant Pathology 64:147–56. doi:10.1111/ppa.2015.64.issue-1.
   Web of Science ®Google Scholar
• Hyten, D. L., G. L. Hartman, R. L. Nelson, R. D. Frederick, V. C. Concibido, J. M. Narvel, and P. B. Cregan. 2007. Map location of the Rpp1 locus that confers resistance to soybean rust in soybean. Crop Science 47:837–40. doi:10.2135/cropsci2006.07.0484.
   Web of Science ®Google Scholar
• Hyten, D. L., J. R. Smith, R. D. Frederick, M. L. Tucker, Q. Song, and P. B. Cregan. 2009. Bulked segregant analysis using the golden gate assay to locate the Rpp3 locus that confers resistance to soybean rust in soybean. Crop Science 49:265–71. doi:10.2135/cropsci2008.08.0511.
   Web of Science ®Google Scholar
• Kendrick, M. D., D. K. Harris, B.-K. Ha, D. L. Hyten, P. B. Cregan, R. D. Frederick, H. R. Boerma, and K. F. Pedley. 2011. Identification of a second Asian soybean rust resistance gene in Hyuuga soybean. Phytopathology 101:535–43. doi:10.1094/PHYTO-09-10-0257.
   PubMed Web of Science ®Google Scholar
• Kim, K., J. R. Unfried, D. L. Hyten, R. D. Frederick, G. L. Hartman, R. L. Nelson, Q. Song, and B. W. Diers. 2012. Molecular mapping of soybean rust resistance in soybean accession PI 561356 and SNP haplotype analysis of the Rpp1 region in diverse germplasm. Theoretical and Applied Genetics 125:1339–52. doi:10.1007/s00122-012-1932-5.
   PubMed Web of Science ®Google Scholar
• Li, S., J. R. Smith, J. D. Ray, and R. D. Frederick. 2012. Identification of a new soybean rust resistance gene in PI 567102B. Theoretical and Applied Genetics 125:133–42. doi:10.1007/s00122-012-1821-y.
   PubMed Web of Science ®Google Scholar
• McLean, R., and D. E. Byth. 1980. Inheritance of resistance to rust (Phakopsora pachyrhizi) in soybeans. Australian Journal of Agricultural Research 31:951–56. doi:10.1071/AR9800951.
   Google Scholar
• Melching, J. S., K. R. Bromfield, and C. H. Kingsolver. 1983. The plant pathogen containment facility at Frederick, Maryland. Plant Diseases 67:717–22. doi:10.1094/PD-67-717.
   Web of Science ®Google Scholar
• Miles, M. R., R. D. Frederick, and G. L. Hartman. 2006. Evaluation of soybean germplasm for resistance to Phakopsora pachyrhizi. Plant Health Progress doi:10.1094.PHP-2006=0104-01-RS.
   Google Scholar
• Miles, M. R., W. Morel, J. D. Ray, J. R. Smith, R. D. Frederick, and G. L. Hartman. 2008. Adult plant evaluation of soybean accessions for resistance to Phakopsora pachyrhizi in the field and greenhouse in Paraguay. Plant Disease 92:96–105. doi:10.1094/PDIS-92-1-0096.
   PubMed Web of Science ®Google Scholar
• Monteros, M. J., A. M. Missaoui, D. V. Phillips, D. R. Walker, and H. R. Boerma. 2007. Mapping and confirmation of the ‘Hyuuga’ red-brown lesion resistance gene for Asian soybean rust. Crop Science 47:829–34. doi:10.2135/cropsci06.07.0462.
   Web of Science ®Google Scholar
• Pham, T. A., M. R. Miles, R. D. Frederick, C. B. Hill, and G. L. Hartman. 2009. Differential responses of resistant soybean entries to isolates of Phakopsora pachyrhizi. Plant Disease 93:224–28. doi:10.1094/PDIS-93-3-0224.
   PubMed Web of Science ®Google Scholar
• Ray, J. D., W. Morel, J. R. Smith, R. D. Frederick, and M. R. Miles. 2009. Genetics and mapping of adult plant rust resistance in soybean PI 587886 and PI 587880A. Theoretical and Applied Genetics 119:271–80. doi:10.1007/s00122-009-1036-z.
   PubMed Web of Science ®Google Scholar
• Ray, J. D., J. R. Smith, W. Morel, N. Bogado, and D. R. Walker. 2011. Genetic resistance to soybean rust in PI567099A is at or near the Rpp3 locus. Journal of Crop Improvement 25:219–31. doi:10.1080/15427528.2011.555833.
   Google Scholar
• Silva, D. C. G., N. Yamanaka, R. L. Brogin, C. A. A. Arias, A. L. Nepomuceno, A. O. Di Mauro, S. S. Pereira, L. M. Nogueira, A. L. L. Passianotto, and R. V. Abdelnoor. 2008. Molecular mapping of two loci that confer resistance to Asian rust in soybean. Theoretical and Applied Genetics 117:57–63. doi:10.1007/s00122-008-0752-0.
   PubMed Web of Science ®Google Scholar
• Sokal, R. R., and F. J. Rohlf. 1995. Biometry, 3rd ed. New York, NY: W.H. Freeman and Company.
   Google Scholar
• Song, Q. J., L. F. Marek, R. C. Shoemaker, K. G. Lark, V. C. Concibido, X. Delannay, J. E. Specht, and P. B. Cregan. 2004. A new integrated genetic linkage map of the soybean. Theoretical and Applied Genetics 109:122–28. doi:10.1007/s00122-004-1602-3.
   PubMed Web of Science ®Google Scholar
• Van Ooijen, J. W. 2006. JoinMap 4 ®, Software for the calculation of genetic linkage maps in experimental populations. Wageningen, Netherlands: Kyazma B.V.
   Google Scholar
• Yates, F. 1934. Contingency tables involving small numbers and the χ2 test. Supplement to the Journal of the Royal Statistical Society 1:217–35. doi:10.2307/2983604.
   Google Scholar
• Yorinori, J. T., W. M. Paiva, R. D. Frederick, L. M. Costamilan, P. F. Bertagnolli, G. L. Hartman, C. V. Godoy, and J. Nunes Jr. 2005. Epidemics of soybean rust (Phakopsora pachyrhizi) in Brazil and Paraguay from 2001 to 2003. Plant Disease 89:675–77. doi:10.1094/PD-89-0675.
   PubMed Web of Science ®Google Scholar