References
- Bassler J, Hurt E. Eukaryotic ribosome assembly. Annu Rev Biochem. 2019;88(1):281–306.
- Woolford JL Jr., Baserga SJ. Ribosome biogenesis in the yeast Saccharomyces cerevisiae. Genetics. 2013;195(3):643–681.
- Russell J, Zomerdijk JC. The RNA polymerase I transcription machinery. Biochem Soc Symp. 2006;73:203–216. DOI:10.1042/bss0730203
- Perez-Fernandez J, Román A, De Las Rivas J, et al. The 90S preribosome is a multimodular structure that is assembled through a hierarchical mechanism. Mol Cell Biol. 2007;27(15):5414–5429.
- Hunziker M, Barandun J, Petfalski E, et al. UtpA and UtpB chaperone nascent pre-ribosomal RNA and U3 snoRNA to initiate eukaryotic ribosome assembly. Nat Commun. 2016;7(1):12090.
- Zhang LM, Wu C, Cai G, et al. Stepwise and dynamic assembly of the earliest precursors of small ribosomal subunits in yeast. Genes Dev. 2016;30(6):718–732.
- Chaker-Margot M, Barandun J, Hunziker M, et al. Architecture of the yeast small subunit processome. Science. 2017;355(6321):6321.
- Kiss-Laszlo Z, Henry Y, Bachellerie J-P, et al. Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs. Cell. 1996;85(7):1077–1088.
- Ganot P, Bortolin ML, Kiss T. Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs. Cell. 1997;89(5):799–809.
- Li HD, Zagorski J, Fournier MJ. Depletion of U14 small nuclear RNA (snR128) disrupts production of 18S rRNA in Saccharomyces cerevisiae. Mol Cell Biol. 1990;10(3):1145–1152.
- Hughes JM, Konings DA, Cesareni G. The yeast homologue of U3 snRNA. EMBO J. 1987;6(7):2145–2155.
- Bally M, Hughes J, Cesareni G. Snr30 - a new, essential small nuclear-Rna from Saccharomyces-Cerevisiae. Nucleic Acids Res. 1988;16(12):5291–5303.
- Sharma K, Tollervey D. Base pairing between U3 small nucleolar RNA and the 5’ end of 18S rRNA is required for pre-rRNA processing. Mol Cell Biol. 1999;19(9):6012–6019.
- Dutca LM, Gallagher JE, Baserga SJ. The initial U3 snoRNA:pre-rRNA base pairing interaction required for pre-18S rRNA folding revealed by in vivo chemical probing. Nucleic Acids Res. 2011;39(12):5164–5180.
- Martin R, Hackert P, Ruprecht M, et al. A pre-ribosomal RNA interaction network involving snoRNAs and the Rok1 helicase. RNA. 2014;20(8):1173–1182.
- Atzorn V, Fragapane P, Kiss T. U17/snR30 is a ubiquitous snoRNA with two conserved sequence motifs essential for 18S rRNA production. Mol Cell Biol. 2004;24(4):1769–1778.
- Vos TJ, Kothe U. snR30/U17 small nucleolar ribonucleoprotein: a critical player during ribosome biogenesis. Cells. 2020;9(10):2195.
- Morrissey JP, Tollervey D. Yeast Snr30 is a small nucleolar Rna required for 18s ribosomal-Rna synthesis. Mol Cell Biol. 1993;13(4):2469–2477.
- Wells GR, Weichmann F, Sloan KE, et al. The ribosome biogenesis factor yUtp23/hUTP23 coordinates key interactions in the yeast and human pre-40S particle and hUTP23 contains an essential PIN domain. Nucleic Acids Res. 2017;45(8):4796–4809.
- Hoareau-Aveilla C, Fayet-Lebaron E, Jády BE, et al. Utp23p is required for dissociation of snR30 small nucleolar RNP from preribosomal particles. Nucleic Acids Res. 2012;40(8):3641–3652.
- Lu J, Sun MY, Ye KQ. Structural and functional analysis of Utp23, a yeast ribosome synthesis factor with degenerate PIN domain. RNA. 2013;19(12):1815–1824.
- Caton EA, Kelly EK, Kamalampeta R, et al. Efficient RNA pseudouridylation by eukaryotic H/ACA ribonucleoproteins requires high affinity binding and correct positioning of guide RNA. Nucleic Acids Res. 2018;46(2):905–916.
- Schneider C, Anderson JT, Tollervey D. The exosome subunit Rrp44 plays a direct role in RNA substrate recognition. Mol Cell. 2007;27(2):324–331.
- Wright JR, Keffer-Wilkes LC, Dobing SR, et al. Pre-steady-state kinetic analysis of the three Escherichia coli pseudouridine synthases TruB, TruA, and RluA reveals uniformly slow catalysis. RNA. 2011;17(12):2074–2084.
- Wang C, Meier UT. Architecture and assembly of mammalian H/ACA small nucleolar and telomerase ribonucleoproteins. EMBO J. 2004;23(8):1857–1867.
- Fayet-Lebaron E, Atzorn V, Henry Y, et al. 18S rRNA processing requires base pairings of snR30 H/ACA snoRNA to eukaryote-specific 18S sequences. EMBO J. 2009;28(9):1260–1270.
- Wells GR, Weichmann F, Colvin D, et al. The PIN domain endonuclease Utp24 cleaves pre-ribosomal RNA at two coupled sites in yeast and humans. Nucleic Acids Res. 2016;44(11):5399–5409.
- Bohnsack MT, Kos M, Tollervey D. Quantitative analysis of snoRNA association with pre-ribosomes and release of snR30 by Rok1 helicase. EMBO Rep. 2008;9(12):1230–1236.
- Tollervey D, Guthrie C. Deletion of a yeast small nuclear RNA gene impairs growth. EMBO J. 1985;4(13B):3873–3878.
- Tollervey D. A yeast small nuclear RNA is required for normal processing of pre-ribosomal RNA. EMBO J. 1987;6(13):4169–4175.