Hsa_circ_0044235 and hsa_circ_0001947 as novel biomarkers in plasma of patients with new-onset systemic lupus erythematosus

References

• Aletaha D, Neogi T, Silman A, Funovits J, Felson D, Bingham C, Birnbaum N, Burmester G, Bykerk V, Cohen M, et al. 2010. The 2010 rheumatoid arthritis classification criteria: An American College of Rheumatology/European League Against Rheumatism collaborative initiative. Ann Rheum Dis. 69:1580–1588.
   PubMed Web of Science ®Google Scholar
• Bombardier C, Gladman D, Urowitz M, Caron D, Chang C. 2010. Derivation of the SLEDAI. A disease activity index for lupus patients. Committee on Prognosis Studies in SLE. Arthritis Rheum. 35:630–640.
   Google Scholar
• Cao S, Zeng Y, Chen M, Ouyang W. 2022. Integrated analysis of immune-related circRNA-miRNA-mRNA regulatory network in ischemic stroke. Front Neurol. 13:889855.
   PubMed Web of Science ®Google Scholar
• Chang N, Li T, Kim J, Landolt-Marticorena C, Fortin P, Gladman D, Urowitz M, Wither J. 2015. Interferon-α induces altered transitional B-cell signaling and function in systemic lupus erythematosus. J Autoimmun. 58:100–110.
   PubMed Web of Science ®Google Scholar
• Chen J, Jia G, Lv X, Li S. 2022. Type 1 diabetes mellitus-related circRNA regulate CD4+ T-cell functions. Bio Med Res Intl. 2022:4625183.
   PubMed Web of Science ®Google Scholar
• Chen L, Yang L. 2015. Regulation of circRNA biogenesis. RNA Biol. 12:381–388.
   PubMed Web of Science ®Google Scholar
• Cheng S, Tang Q, Xie S, Wen S, Zhang H, Xie Z, Jiang W. 2022. Role of non-coding RNA in airway allergic diseases through regulation of T-cell subsets. Mediat Inflamm. 2022:6125698.
   PubMed Web of Science ®Google Scholar
• Di Battista M, Marcucci E, Elefante E, Tripoli A, Governato G, Zucchi D, Tani C, Alunno A. 2018. One year in review 2018: Systemic lupus erythematosus. Clin Exp Rheumatol. 36(5):763–777.
   PubMed Web of Science ®Google Scholar
• Duan S, Wang S, Huang T, Wang J, Yuan X. 2021. circRNAs: Insight into their role in tumor-associated macrophages. Front Oncol. 11:780744.
   PubMed Web of Science ®Google Scholar
• Feng Z, Li L, Tu Y, Shu X, Zhang Y, Zeng Q, Luo L, Wu A, Chen W, Cao Y, et al. 2021. Identification of circular RNA-based immunomodulatory networks in colorectal cancer. Front Oncol. 11:779706.
   PubMed Web of Science ®Google Scholar
• Guo G, Wang H, Ye L, Shi X, Yan K, Lin K, Huang Q, Li B, Lin Q, Zhu L, et al. 2019. Hsa_circ_0000479 as a novel diagnostic biomarker of systemic lupus erythematosus. Front Immunol. 10:2281.
   PubMed Web of Science ®Google Scholar
• Huang Z, Su R, Qing C, Peng Y, Luo Q, Li J. 2018. Plasma ccircular RNAs hsa_circ_0001953 and hsa_circ_0009024 as diagnostic biomarkers for active tuberculosis. Front Microbiol. 9:2010.
   PubMed Web of Science ®Google Scholar
• Jeck W, Sorrentino J, Wang K, Slevin MK, Burd CE, Liu J, Marzluff WF, Sharpless NE. 2013. Circular RNAs are abundant, conserved, and associated with ALU repeats. RNA. 19:141–157.
   PubMed Web of Science ®Google Scholar
• Jiang Z, Huang L, Chen L, Zhou J, Liang B, Bai X, Wu L, Huang H. 2022. Circular RNA profile in Graves’ Dsease and potential function of hsa_circ_0090364. Endocrine Connect. 11:e220030.
   Web of Science ®Google Scholar
• Lech M, Kantner C, Kulkarni O, Ryu M, Vlasova E, Heesemann J, Anz D, Endres S, Kobayashi K, Flavell R, et al. 2011. Interleukin-1 receptor-associated kinase-M suppresses systemic lupus erythematosus. Ann Rheum Dis. 70:2207–2217.
   PubMed Web of Science ®Google Scholar
• Li H, Li K, Lai W, Li X, Wang H, Yang J, Chu S, Wang H, Kang C, Qiu Y. 2018. Comprehensive circular RNA profiles in plasma reveals that circular RNAs can be used as novel biomarkers for systemic lupus erythematosus. Clin Chim Acta. 480:17–25.
   PubMed Web of Science ®Google Scholar
• Li L, Zhu Z, Zhao W, Tao S, Li B, Xu S, Wang J, Zhang M, Wu J, Leng R, et al. 2018. Circular RNA expression profile and potential function of hsa_circ_0045272 in systemic lupus erythematosus. Immunology. 155:137–149.
   PubMed Web of Science ®Google Scholar
• Li S, Zhang J, Tan X, Deng J, Li Y, Piao Y, Li C, Yang W, Mo W, Sun J, et al. 2019. Microarray expression profile of circular RNAs and mRNAs in children with systemic lupus erythematosus. Clin Rheumatol. 38:1339–1350.
   PubMed Web of Science ®Google Scholar
• Liang B, Li M, Deng Q, Wang C, Rong J, He S, Xiang Y, Zheng F. 2020. CircRNA ZNF609 in peripheral blood leukocytes acts as a protective factor and a potential biomarker for coronary artery disease. Ann Translat Med. 8:741.
   PubMed Web of Science ®Google Scholar
• Liang Q, Fu J, Wang X, Liu L, Xiao W, Gao Y, Yang L, Yu H, Xie X, Tu Z, et al. 2022. Circs100a11 enhances M2a macrophage activation and lung inflammation in children with asthma. Allergy. Sep 14. doi: 10.1111/all.15515.Online ahead of print.
   Web of Science ®Google Scholar
• Livak K, Schmittgen T. 2001. Analysis of relative gene expression data using real-time quantitative PCR and the 2-ΔΔCt method. Methods. 25:402–408.
   PubMed Web of Science ®Google Scholar
• Lopez P, Rodriguez-Carrio J, Martinez-Zapico A, Pérez-Álvarez A, Suorez-Diaz S, Mozo L, Benavente L, Caminal-Montero L, Suorez A. 2020. Low-density granulocytes and monocytes as biomarkers of cardiovascular risk in systemic lupus erythematosus. Rheumatology. 59:1752–1764.
   PubMed Web of Science ®Google Scholar
• Luo Q, Liu J, Fu B, Zhang L, Guo Y, Huang Z, Li J. 2019a. Circular RNAs Hsa_circ_0002715 and Hsa_circ_0035197 in peripheral blood are novel potential biomarkers for new-onset rheumatoid arthritis. Dis Markers. 2019:2073139.
   PubMed Web of Science ®Google Scholar
• Luo Q, Zhang L, Fang L, Fu B, Guo Y, Huang Z, Li J. 2020a. Circular RNAs hsa_circ_0000479 in peripheral blood mononuclear cells as novel biomarkers for systemic lupus erythematosus. Autoimmunity. 53:167–176.
   PubMedGoogle Scholar
• Luo Q, Zhang L, Li X, Fu B, Guo Y, Huang Z, Li J. 2019b. Identifcation of circular RNA hsa_circ_0044235 and hsa_circ_0068367 as novel biomarkers for systemic lupus erythematosus. Intl J Mol Med. 44:1462–1472.
   PubMed Web of Science ®Google Scholar
• Luo Q, Zhang L, Xiong L, Fu B, Guo Y, Huang, ZLJ 2020b. Peripheral blood circular RNA hsa_circ_0082688-hsa circ_0008675 can be used as a candidate biomarker of systemic lupus erythematosus with renal involvement. Clin Exp Rheumatol. 38:822–833.
   PubMed Web of Science ®Google Scholar
• Maass P, Glazar P, Memczak S, Dittmar G, Hollfinger I, Schreyer L, Sauer A, Toka O, Aiuti A, Luft F, et al. 2017. A map of human circular RNAs in clinically relevant tissues. J Mol Med. 95:1179–1189.
   PubMed Web of Science ®Google Scholar
• Memczak S, Jens M, Elefsinioti A, Torti F, Krueger J, Rybak A, Maier L, Mackowiak S, Gregersen L, Munschauer M, et al. 2013. Circular RNAs are a large class of animal RNA with regulatory potency. Nature. 495:333–338.
   PubMed Web of Science ®Google Scholar
• Memczak S, Papavasileiou P, Peters O, Rajewsky N. 2015. Identification and characterization of circular RNA as a new class of putative biomarkers in human blood. PLoS One. 10(10):e0141214.
   PubMed Web of Science ®Google Scholar
• Miao Q, Zhong Z, Jiang Z, Lin Y, Ni B, Tang W, Tang J. 2019. RNA-seq of circular RNA identified circPTPN22 as a potential new activity indicator in systemic lupus erythematosus. Lupus. 28:520–528.
   PubMed Web of Science ®Google Scholar
• O’Gorman W, Hsieh E, Savig E, Gherardini P, Hernandez J, Hansmann L, Balboni I, Utz P, Bendall S, Fantl W, et al. 2015. Single-cell systems-level analysis of human toll-like receptor activation defines a chemokine signature in patients with systemic lupus erythematosus. J Allergy Clin Immunol. 136:1326–1336.
   PubMed Web of Science ®Google Scholar
• Ouyang Q, Huang Q, Jiang Z, Zhao J, Shi G, Yang M. 2018. Using plasma circRNA_002453 as a novel biomarker in the diagnosis of lupus nephritis. Mol Immunol. 101:531–538.
   PubMed Web of Science ®Google Scholar
• Paradowska-Gorycka A, Sowinska A, Stypinska B, Grobelna MK, Walczyk M, Olesinska M, Piotrowski P, Jagodzinski PP. 2016. Genetic variants in IL-12B and IL-27 in Polish patients with systemic lupus erythematosus. Scand J Immunol. 84:49–60.
   PubMed Web of Science ®Google Scholar
• Petri M, Orbai A, Alarcón G, Gordon C, Merrill J, Fortin P, Bruce IN, Isenberg D, Wallace D, Nived O, et al. 2012. Derivation and validation of the systemic lupus international collaborating clinics classification criteria for systemic lupus erythematosus. Arthritis Rheum. 64:2677–2686.
   PubMed Web of Science ®Google Scholar
• Song M, Gao J, Yan T, Bi E, An T, Wang X, Jiang W, Wang T, Chen Z, Shi Z, et al. 2021. Hsa_circ_0000652 aggravates inflammation by activation of macrophages and enhancement of OX40/OX40L interaction in ankylosing spondylitis. Front Cell Devel Biol. 9:737599.
   PubMed Web of Science ®Google Scholar
• Tofigh R, Hosseinpourfeizi M, Baradaran B, Teimourian S, Safaralizadeh R. 2023. Rheumatoid arthritis and non-coding RNAs: How to trigger inflammation. Life Sci. 315:121367.
   PubMed Web of Science ®Google Scholar
• Wan L, Liu J, Huang C, Zhu Z, Li F, Sun G, Wang K, Li S, Ma XCX, Yuan W. 2022. Role of m6A modification and novel circ_0066715/miR-486-5p/ETS1 axis in rheumatoid arthritis macrophage polarization progression. Aging. 14:10009–10026.
   PubMedGoogle Scholar
• Wang J, Niu R, Jiang L, Wang Y, Shao X, Wu M, Ma Y. 2019. The diagnostic values of C-reactive protein and procalcitonin in identifying systemic lupus erythematosus infection and disease activity. Medicine. 98:e16798.
   PubMed Web of Science ®Google Scholar
• Wang X, Zhang C, Wu Z, Chen Y, Shi W. 2018. CircIBTK inhibits DNA demethylation and activation of AKT signaling pathway via miR-29b in peripheral blood mononuclear cells in systemic lupus erythematosus. Arthritis Res Ther. 20:118.
   PubMed Web of Science ®Google Scholar
• Wu J, Li J, Liu H, Yin J, Zhang M, Yu Z, Miao H. 2019. Circulating plasma circular RNAs as novel diagnostic biomarkers for congenital heart disease in children. J Clin Lab Anal. 2019; 33:e22998.
   PubMed Web of Science ®Google Scholar
• Ye Z, Liu X, Yang Y, Zhang X, Yu T, Li S, Feng Y, Luo G. 2018. The differential expression of novel circular RNAs in an acute lung injury rat model caused by smoke inhalation. J Physiol Biochem. 74:25–33.
   PubMed Web of Science ®Google Scholar
• Yu J, Ding W, Wang M, Guo X, Xu J, Xu Q, Yang Y, Sun S, Liu J, Qin L, et al. 2020. Plasma circular RNA panel to diagnose hepatitis B virus-related hepatocellular carcinoma: A large-scale, multi-center study. Intl J Cancer. 146:1754–1763.
   PubMed Web of Science ®Google Scholar
• Zhang C, Wang X, Chen Y, Wu Z, Zhang C, Shi W. 2018. Down-regulation of hsa_circ_0012919, the sponge for miR-125a-3p, contributes to DNA methylation of CD11a and CD70 in CD4+ T-cells of systemic lupus erythematous. Clin Sci. 132:2285–2298.
   PubMed Web of Science ®Google Scholar
• Zhang M, Wang J, Zhu Z, Li LJ, Liu R, Yang X, Leng R, Li X, Pan H, Ye D. 2018. Differentially-expressed circular RNA in systemic lupus erythematosus and their clinical significance. Biomed Pharmacother. 107:1720–1727.
   PubMed Web of Science ®Google Scholar
• Zhou R, Shi Z, Shan K, Zhang S, Zhang Y, Liang Y, Yan B, Zhao C. 2022. Comparative analysis of differentially-expressed circular RNAs in polarized macrophages. Front Genet. 13:823517.
   PubMed Web of Science ®Google Scholar
• Zhu K, Zhan H, Peng Y, Yang L, Gao Q, Jia H, Dai Z, Tang Z, Fan J, Zhou J. 2020. Plasma hsa_circ_0027089 is a diagnostic biomarker for hepatitis B virus-related hepatocellular carcinoma. Carcinogenesis. 41:296–302.
   PubMed Web of Science ®Google Scholar