Genetic Relationship of Iranian Pear Genotypes with European and Asian Pears as Revealed by Random Amplified Polymorphic DNA Markers

Literature cited

• Arzani, K. 2002. Introduction of some Asian pear cultivars (Pyrus pyrifolia) to Iran. Acta Hort. 596:287–290.
   Google Scholar
• Arzani, K. 2005. Progress in National Asian pear project: Study on the adaptation of some Asian pear (Pyrus serotina Rhed) cultivars under Iran environmental conditions. Acta Hort. 671:209–212.
   Google Scholar
• Bao, L., K. Chen, D. Zhang, Y. Cao, T. Yamamoto, and Y. Teng. 2007. Genetic diversity and similarity of pear (Pyrus L.) cultivars native to East Asia revealed by SSR (simple sequence repeat) markers. Genet. Resour. Crop Evol. 54:959–971.
   Web of Science ®Google Scholar
• Bell, R.L. 1990. Pears (Pyrus), p. 665–697. In: J.N. Moore and J.R. Ballington (eds.). Genetic resources of temperate fruit and nut crops. International Society for Horticultural Science, Wageningen, Netherland.
   Google Scholar
• Challice, J.S., and M.N. Westwood. 1973. Numerical taxonomic studies of the genus Pyrus using both chemical and botanical characters. Bot. J. Linn. Soc. 67:121–148.
   Web of Science ®Google Scholar
• Chaparro, J.X., D.J. Werner, D. O’Malley, and R.R. Sederoff. 1994. Targeted mapping and linkage analysis of morphological isozyme, and RAPD markers in peach. Theor. Appl. Genet. 87:805–815.
   PubMed Web of Science ®Google Scholar
• Chevreau, E., S. Leuliette, and M. Gallet. 1997. Inheritance and linkage of isozyme loci in pear (Pyrus communis L.). Theor. Appl. Genet. 94:498–506.
   Web of Science ®Google Scholar
• Cho, K.H., I.S. Shin, S.H. Kim, J.H. Kim, D.H. Kim, Y.U. Shin, and H.S. Hwang. 2012. Identification of Korean pear cultivars using combinations of SCAR markers. Hort. Environ. Biotechnol. 53:228–236.
   Web of Science ®Google Scholar
• Erfani, J., A. Ebadi, H. Abdollahi, and R. Fatahi. 2012. Genetic diversity of some pear cultivars and genotypes using simple sequence repeat (SSR) markers. Plant Mol. Biol. Rep. 30:1065–1072.
   Web of Science ®Google Scholar
• Erfani, J., A. Ebadi, H. Abdollahi, and R. Fatahi. 2014. Evaluation of genetic diversity of some pear (Pyrus spp.) genotypes and species based on morphological characteristics. Iran. J. Hort. Sci. 45:11–21.
   Google Scholar
• Jiang, Z., F. Tang, H. Huang, H. Hu, and Q. Chen. 2009. Assessment of genetic diversity of Chinese sand pear landraces (Pyrus pyrifolia Nakai) using simple sequence repeat markers. HortScience 44:619–626.
   Web of Science ®Google Scholar
• Jookovskiy, P.M. 1950. Cultivated plants and their center of origins, 595 p. Savetskaya Science, Moscow, Russia.
   Google Scholar
• Kim, C.S., C.H. Lee, K.W. Park, S.J. Kang, I.S. Shin, and G.P. Lee. 2005. Phylogenetic relationships among Pyrus pyrifolia and P. communis detected by randomly amplified polymorphic DNA (RAPD) and conserved rDNA sequences. Sci. Hort. 106:491–501.
   Web of Science ®Google Scholar
• Kimura, T., Y.Z. Shi, M. Shoda, K. Kotobuki, N. Matsuta, T. Hayashi, Y. Ban, and T. Yamamoto. 2002. Identification of asian pear varieties by SSR analysis. Breed. Sci. 52:115–121.
   Web of Science ®Google Scholar
• Kole, C. 2011. Wild crop relatives: Genomic and breeding resources temperate fruits. Springer Heidelberg Dordrecht, Berlin, Germany.
   Google Scholar
• Koller, B., A. Lehmann, J.M. McDermott, and C. Gessler. 1993. Identification of apple cultivars using RAPD markers. Theor. Appl. Genet. 85:901–904.
   PubMed Web of Science ®Google Scholar
• Lisek, A., and E. Rozpara. 2010. Identification of pear cultivars with RAPD and ISSR markers. J. Fruit Ornam. Plant Res. 18:17–22.
   Google Scholar
• Liu, B.H. 1998. Statistical genomics: Linkage, mapping and QTL analysis. CRC Press, Boca Raton, FL.
   Google Scholar
• Liu, W., X. Zhang, F. Li, and X. Ma. 2008. Genetic diversity of Cynodon dactylon accessions based on RAMP markers in hengduan mountains from southwest of China. Seed 27:56–59.
   Google Scholar
• Mantel, N. 1967. The detection of disease clustering and generalized regression approach. Cancer Res. 27:209–220.
   PubMed Web of Science ®Google Scholar
• Monte-Corvo, L., L. Cabrita, C. Oliveira, and J. Leitão. 2000. Assessment of genetic relationships among Pyrus species and cultivars using AFLP and RAPD markers. Genet. Resour. Crop Evol. 47:257–265.
   Web of Science ®Google Scholar
• Nei, M., and W.H. Li. 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. U.S.A. 76:5269–5273.
   PubMed Web of Science ®Google Scholar
• Nikzad Gharehaghaji, A., H. Abdollahi, K. Arzani, A. Shojaeiyan, M. Naghi Padasht, L. Dondini, and P. De Franceschi. 2014. Contribution of western and eastern species to the Iranian pear germplasm revealed by the characterization of S-genotypes. Acta Hort. 1032:159–167.
   Google Scholar
• Oliveira, C.M., M. Mota, L. Monte-Corvo, L. Goulão, and D.M. Silva. 1999. Molecular typing of Pyrus based on RAPD markers. Sci. Hort. 79:163–174.
   Web of Science ®Google Scholar
• Paganava, V. 2003. Taxonomic reliability of leaf and fruit morphological characteristics of the Pyrus L. taxa in Slovakia. HortScience 3:98–107.
   Google Scholar
• Panwar, P., M. Nath, V.K. Yadav, and A. Kumar. 2010. Comparative evaluation of genetic diversity using RAPD, SSR and cytochrome P450 gene based markers with respect to calcium content in finger millet (Eleusine coracana L. Gaertn.). J. Genet. 89:121–133.
   PubMed Web of Science ®Google Scholar
• Peakall, R., and P.E. Smouse. 2012. GenAlEx 6.5: Genetic analysis in Excel. Population genetic software for teaching and research—An update. Bioinformatics 28:2537–2539.
   PubMed Web of Science ®Google Scholar
• Qu, X., J. Lu, O. Lamikanra, V. Science, and A. Florida. 1996. Genetic diversity in Muscadine and American bunch grapes based on randomly amplified polymorphic DNA (RAPD) analysis. J Amer. Soc. Hort. Sci. 121:1020–1023.
   Web of Science ®Google Scholar
• Rao, N.K. 2004. Plant genetic resources: Advancing conservation and use through biotechnology. Afr. J. Biotechnol. 3:136–145.
   Google Scholar
• Rohlf, F.J. 1998. NTSYS-pc: Numerical taxonomy and multivariate analysis system, version 2.0. Exeter Publishing, Setauket, New York.
   Google Scholar
• Roldán-Ruiz, I., J. Dendauw, E. Van Bockstaele, A. Depicker, and M. De Loose. 2000. AFLP markers reveal high polymorphic rates in ryegrasses (Lolium spp.). Mol. Breed. 6:125–134.
   Web of Science ®Google Scholar
• Sabeti, H. 1976. Forests, trees and shrubs of Iran. Agricultural and Natural Resources Research Publications, Tehran, Iran.
   Google Scholar
• Safarpour Shorbakhlou, M., M. Bahar, B.E. Seyyed Tabatabaei, and H. Abdollahi. 2008. Determination of genetic diversity in pear (Pyrus spp.) using microsatellite markers. Iran. J. Hort. Sci. Technol. 9:113–128.
   Google Scholar
• Schiliro, E., S. Predieri, and A. Bertaccini. 2001. Use of random amplified polymorphic DNA analysis to detect genetic variation in Pyrus species. Plant Mol. Biol. Rep. 19:271–272.
   Google Scholar
• Shannon, C.E., and W. Weaver. 1949. The mathematical theory of communication, 144 p. University of Illinois Press, Urbana, IL.
   Google Scholar
• Sharifani, V., A. Erfani, C. Bagerian, T. Nishtani, and T.K. Yamamoto. 2008. Mutations in chloroplast DNA revealed relations and discriminations in genus Pyrus. Acta Hort. 800:355–364.
   Google Scholar
• Tahzibi Hagh, F., H. Abdollahi, A. Ghasemi, and D. Fathi. 2011. Vegetative and reproductive traits of some Iranian native pear (Pyrus communis L.) cultivars in climatical conditions of Karaj. Seed Plant Improv. J. 27:37–55.
   Google Scholar
• Teng, Y., K. Tanabe, F. Tamura, and A. Itai. 2002. Genetic relationships of Pyrus species and cultivars native to east Asia revealed by randomly amplified polymorphic DNA markers. J. Amer. Soc. Hort. Sci. 127:262–270.
   Web of Science ®Google Scholar
• Tessier, C., J. David, P. This, J.M. Boursiquot, and·A. Charrier. 1999. Optimization of the choice of molecular markers for varietal identification in Vitis vinifera L. Theor. Appl. Genet. 98:171–177.
   Google Scholar
• Vavilov, N.I. 1992. Origin and geography of cultivated plants, vol. 15. Cambridge University Press, Cambridge, UK.
   Google Scholar
• Volk, G.M., C.M. Richards, A.D. Henk, A.A. Reilley, N.V, Bassil, and J.D. Postman. 2006. Diversity of wild pyrus communis based on microsatellite analyses. J. Amer. Soc. Hort. Sci. 131:408–417.
   Web of Science ®Google Scholar
• Vroh Bi, I., L. Harvengt, A. Chandeller, G. Mergeal, and P.D. Jardin. 1996. Improved RAPD amplification of recalcitrant plant DNA by the use of activated charcoal during DNA extraction. Plant Breed. 115:205–206.
   Web of Science ®Google Scholar
• Wünsch, A., and J.I. Hormaza. 2007. Characterization of variability and genetic similarity of European pear using microsatellite loci developed in apple. Sci. Hort. 113:37–43.
   Web of Science ®Google Scholar
• Yamamoto, T., T. Kimura, M. Shoda, Y. Ban, T. Hayashi, and N. Matsta. 2002. Development of microsatellite markers in the Japanese pear (Pyrus pyrifolia Nakai). Mol. Ecol. Notes 2:14–16.
   Web of Science ®Google Scholar
• Yamamoto, T., T. Kimura, Y. Sawamura, T. Manabe, K. Kotobuki, T. Hayashi, Y. Ban, and N. Matsuta. 2002. Simple sequence repeats for genetic analysis in pear. Euphytica 124:129–137.
   Web of Science ®Google Scholar
• Zhebentyayeva, T.N., G.L. Reighard, V.M. Gorina, and A.G. Abbott. 2003. Simple sequence repeat (SSR) analysis for assessment of genetic variability in apricot germplasm. Theor. Appl. Genet. 106:435–444.
   PubMed Web of Science ®Google Scholar