Advanced search
Publication Cover
Mycologia Volume 95, 2003 - Issue 6
Submit an article Journal homepage
153
Views
15
CrossRef citations to date
0
Altmetric
Original Articles

Phylogenetic relationships of European Phlegmacium species (Cortinarius, Agaricales)

S. Garnica
,
M. Weiß Lehrstuhl für Spezielle Botanik und Mykologie, Botanisches Institut, Universität Tübingen, Auf der Morgenstelle 1, D-72076 Tübingen, Germany
,
B. Oertel Institut für Gartenbauwissenschaft, Universität Bonn, Auf dem Hügel 6, D-53121 Bonn, Germany
&
F. Oberwinkler Lehrstuhl für Spezielle Botanik und Mykologie, Botanisches Institut, Universität Tübingen, Auf der Morgenstelle 1, D-72076 Tübingen, Germany
Pages 1155-1170 | Accepted 24 Apr 2003, Published online: 31 Jan 2017

  • Bidaud A, Moënne-Loccoz P, Reumaux P., 1994 . Atlas des Cortinaires, Clé Génerale des sous-genres, sections, sous-sections et séries. Annency: Editions Féderation mycologique Dauphiné-Savoie
  • Binder M, Hibbett DS., 2002 Higher-level phylogenetic relationships of Homobasidiomycetes (mushroom-forming fungi) inferred from four rDNA regions. Mol Phylogenet Evol 22:76-90
  • Boekhout T, Fell JW, O'Donnell K., 1995 Molecular systematics of some yeast-like anamorphs belonging to the Ustilaginales and Tilletiales. Stud Mycol 38:175-183
  • Brandrud TE, 1996a Cortinarius subgenus Phlegmacium section Phlegmacium in Europe. Descriptive part. Edinb J Bot 53:331-400
  • ———. 1996b Cortinarius subgenus Phlegmacium, section Phlegmacium in Europe. A study of character variation and ecology including a numerical analysis of the C. argutus complex. Mycol Res 100:471-485
  • ———. 1998a Cortinarius subgenus Phlegmacium section Phlegmacioides (= Variicolores) in Europe. Edinb J Bot 55:65-156
  • ———. 1998b Cortinarius subgen. Phlegmacium sect. Fulvi—chemotaxonomy versus morphological taxonomy. Journal des JEC 0:4-9
  • ———, Lindström H, Marklund H, Melot J, Muskos S., 1990–1998 Cortinarius, Flora Photographica. Vols. 1 (1990), 2 (1992), 3 (1995) & 4 (1998) (German Version). Cortinarius HB, Matfors
  • Earle FS., 1909 The genera of the North American gill fungi. Bull New York Bot Gard 5:373-451
  • Fayod V., 1889 Podrome d'une histoire naturelle des Agaricinées. Ann Sci Nat Bot VII 9:181-411
  • Felsenstein J., 1981 Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17:368-376
  • Fries EM., 1821 Systema mycologicum. I. Lundae. 520 p
  • ———. 1836–1838 Epicrisis systematis mycologici seu synopsis Hymenomycetum. Upsaliae. 610 p
  • ———. 1878–1884 Icones selectae Hymenomycetum nondum delineatorum. II. Holmiae et Upsalae. 104 p
  • Gardes M, Bruns D., 1993 ITS primers with enhanced specificity for basidiomycetes: application to the identification of mycorrhizae and rusts. Mol Ecol 2:113-118
  • Garnica S, Weiß M, Oberwinkler F., 2002 New Cortinarius species from Nothofagus forests in South Chile. Mycologia 94:136-145
  • ———,———,———. 2003 Morphological and molecular phylogenetic studies in South American Cortinarius species. Mycol Res 107:1143-1156
  • Gill M, Steglich W., 1987 Pigments of Fungi (Macromycetes). Progr Chem Organic Nat Prod 51:1-317
  • Høiland K, Holst-Jensen A., 2000 Cortinarius phylogeny and possible taxonomic implications of ITS rDNA sequences. Mycologia 92:694-710
  • Huelsenbeck JP, Larget B, Miller RE, Ronquist F., 2002 Potential applications and pitfalls of Bayesian inference of phylogeny. Syst Biol 51:673-688
  • ———, Ronquist F., 2001 MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754-755
  • Larget B, Simon DL., 1999 Markov Chain Monte Carlo algorithms for the Bayesian analysis of phylogenetic trees. Mol Biol Evol 16:750-759
  • Maier W, Begerow D, Weiß M, Oberwinkler F., 2003 Phylogeny of the rust fungi: an approach using nuclear large subunit ribosomal DNA sequences. Can J Bot 81:12-23
  • Moënne-Loccoz P, Reumaux P, Bidaud A., 1990–2001 Atlas des Cortinaires 1–11. Annency: Editions Féderation mycologique Daupiné-Savoie
  • Moser M., 1960 Die Gattung Phlegmacium (Schleimköpfe). Die Pilze Mitteleuropa, Bd. IV. Bad Heilbrunn: J. Klinkhardt. 440 p
  • ———. 1983 Die Röhrlinge und Blätterpilze. 5th ed. In: Gams H, ed. Kleine Kryptogamenflora, Band II b/2. Stuttgart, New York: G. Fischer. 532 p
  • ———. 1986 Cortinarius and Dermocybe. In: Singer R, ed. The Agaricales in modern taxonomy. 4th ed. Koenigstein, Germany: Koeltz Scientific Books. p 618–656
  • ———, Ammirati JF., 1996 Studies in North American Cortinarii II. Interesting and new species collected in the North Cascade Mountains, Washington. Mycotaxon 58:387-412
  • ———, ———. 1997 Studies on North American Cortinarii IV. New and interesting Cortinarius species (subgenus Phlegmacium) from oak forests in Northern California. Sydowia 49:25-48
  • ———, ———. 1999 Studies in North American Cortinarii V. New and interesting Phlegmacia from Wyoming and the Pacific Northwest. Mycotaxon 72:289-321
  • ———, McKnight KH, Sigl M., 1994 The genus Cortinarius (Agaricales) in the Greater Yellowstone area. Mycorrhizal host associations and taxonomic considerations. In: Despain DG, ed. Plants and their environments: Proc First Biennial Sci Conf on the Greater Yellowstone Ecosystem. p 239–246
  • ———, ———, Ammirati JF., 1995 Studies on North American Cortinarii I. New and interesting taxa from the Greater Yellowstone area. Mycotaxon 55:301-346
  • Mullis KB, Faloona FA., 1987 Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction. Methods Enzymol 155:335-350
  • Murphy WJ, Eizirik E, O'Brien SJ, Madsen O, Scally M, Douady CJ, Teeling E, Ryder OA, Stanhope MJ, de Jong WW, Springer MS., 2001 Resolution of the early placental mammal radiation using Bayesian phylogenetics. Science 294:2348-2351
  • O'Donnell K., 1993 Fusarium and its near relatives. In: Reynolds DR, Taylor JW, eds. The fungal holomorph: mitotic, meiotic and pleomorphic speciation in fungal systematics. Wallingford, UK: CAB International. p 225–233
  • Oertel B., 1984 Untersuchungen zur Konstitution von Dihydroanthracenonen und Angaben zu ihrer Verbreitung in Pilzen [Doctoral Dissertation]. Bonn, Germany: Bonn Univ. 249 p
  • ———, Laber D., 1986 Die Laugenreaktion an der Unterseite der Stielknolle bei Fruchtkörpern der Gattung Cortinarius, Untergattung Phlegmacium (Agaricales). Z Mykol 52:139-154
  • Peintner U, Bougher NL, Castellano MA, Moncalvo JM, Moser MM, Trappe JM, Vilgalys R., 2001 Multiple origins of sequestrate fungi related to Cortinarius (Cortinariaceae). Amer J Bot 88:2168-2719
  • Rambaut A., 1996 Se-Al. Sequence Alignment Editor. Version 1.0. South Parks Road, Oxford, U.K.: Department of Zoology, Oxford Univ
  • Reijnders AFM., 1979 On carpophore-development in the genera Cortinarius, Dermocybe and Leucocortinarius. Sydowia Beih 8:335-348
  • ———. 1986 Development of the primordium of the carpophore. In: Singer R, ed. The Agaricales in modern taxonomy. 4th ed. Koenigstein, Germany: Koeltz Scientific Books, p 20–29
  • Ricken A., 1915 Die Blätterpilze (Agaricaceae) Deutschlands und der angrenzenden Länder, besonders Oesterreichs und der Schweiz. Vol. 1. Leipzig: Theodor Oswald Weigel. 480 p
  • Sampaio JP, Weiß M, Gadanho M, Bauer R., 2002 New taxa in the Tremellales: Bulleribasidium oberjochense gen. et sp. nov., Papiliotrema bandonii gen. et sp. nov. and Fibulobasidium murrhardtense sp. nov. Mycologia 94:873-887
  • Singer R., 1986 The Agaricales in modern taxonomy. 4th ed. Koenigstein, Germany: Koeltz Scientific Books. 981 p.
  • Steglich W, Kopanski L, Wolf M., 1984 Indolalkaloide aus dem Blätterpilz Cortinarius infractus (Agaricales). Tetrahedr Lett 25:2341-2344
  • ———, Oertel B., 1985 Untersuchungen zur Konstitution und Verbreitung der Farbstoffe von Cortinarius, Untergattung Phlegmacium (Agaricales). Sydowia 37:284-295
  • Swofford DL., 2001 PAUP*: phylogenetic analysis using parsimony (*and other methods). Version 4.0b10. Sunderland, Massachusetts: Sinauer Associates
  • ———, Olsen G, Waddell PJ, Hillis DM., 1996 Phylogenetic inference. In: Hillis DM, Moritz C, Mable BK, eds. Molecular systematics. 2nd ed. Sunderland, Massachusetts: Sinauer Associates. p 407–514
  • Vilgalys R, Hester M., 1990 Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol 172:4238-4246
  • Weiß M, Oberwinkler F., 2001 Phylogenetic relationships in Auriculariales and related groups—hypotheses derived from nuclear ribosomal DNA sequences. Mycol Res 105:403-415
  • ———, Yang ZL, Oberwinkler F., 1998 Molecular phylogenetic studies in the genus Amanita. Can J Bot 76:1170-1179
  • White TJ, Bruns T, Lee S, Taylor J., 1990 Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand H, Sninsky JS, White TJ, eds. PCR protocols: a guide to methods and amplifications. New York: Academic Press. p 315–322
  • Wünsche O., 1877 Die verbreitetsten Pilze. Leipzig. 332 p

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Order Reprints Request Corporate Permissions

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

Request Academic Permissions

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.