An overview of the higher level classification of Pucciniomycotina based on combined analyses of nuclear large and small subunit rDNA sequences

LITERATURE CITED

• Aime MC. 2006. Toward resolving family-level relationships in rust fungi (Uredinales). Mycoscience 47:112–122.
   Google Scholar
• Antonovics J, Hood ME, Partain J. 2002. The ecology and genetics of a host-shift: Microbotryum as a model system. Am Nat 160:S40–S53.
   Google Scholar
• Atkinson GF. 1902. Preliminary note on two new genera of basidiomycetes. J Mycol 8:106–107.
   Google Scholar
• Bandoni RJ. 1998. On some species of Mycogloea. Mycoscience 39:31–36.
   Google Scholar
• Bauer R, Begerow D, Oberwinkler F, Marvanová L. 2003. Classicula: the teleomorph of Naiadella fluitans. Mycologia 95:756–764.
   Google Scholar
• ———, ———, ———, Piepenbring M, Berbee ML. 2001. Ustilaginomycetes. In: McLaughlin DJ, McLaughlin EG, Lemke PA, eds. Systematics and evolution. Berlin: Springer, The Mycota VII, Part B: 57–83.
   Google Scholar
• ———, ———, Sampaio JP, Weiß M, Oberwinkler F. 2006. The simple-septate basidiomycetes: a synopsis. Mycol Prog 5:41–66.
   Google Scholar
• ———, Oberwinkler F. 1990. Meiosis, spindle pole body cycle and taxonomy of the heterobasidiomycete Pachnocybe ferruginea. Plant Syst Evol 172:241–261.
   Google Scholar
• ———, ———. 1991a. The colacosomes: new structures at the host-parasite interface of a mycoparasitic basidiomycete. Bot Acta 104:53–57.
   Google Scholar
• ———, ———. 1991b. The symplechosome: a unique cell organelle of some basidiomycetes. Bot Acta 104:93–97.
   Google Scholar
• ———, ———, Vánky K. 1997. Ultrastructural markers and systematics in smut fungi and allied taxa. Can J Bot 75: 1273–1314.
   Google Scholar
• Begerow D, Bauer R, Oberwinkler F. 1997. Phylogenetic studies on nuclear LSU rDNA sequences of smut fungi and related taxa. Can J Bot 75:2045–2056.
   Google Scholar
• ———, John B, Oberwinkler F. 2004. Evolutionary relationships among β-tubulin gene sequences of basidiomycetous fungi. Mycol Res 108:1257–1263.
   Google Scholar
• Berres ME, Szabo LJ, McLaughlin DJ. 1995. Phylogenetic relationships in auriculariaceous basidiomycetes based on 25S ribosomal DNA sequences. Mycologia 87:821–840.
   Google Scholar
• Blanz PA, Gottschalk M. 1986. Systematic position of Septobasidium, Graphiola and other basidiomycetes as deduced on the basis of their 5S ribosomal RNA nucleotide sequences. Sys Appl Microbiol 8:121–127.
   Google Scholar
• Boehm EWA, McLaughlin DJ. 1988. Eocronartium muscicola: a basidiomycetous moss parasite exploiting gametophytic transfer cells. Can J Bot 66:762–770.
   Google Scholar
• Couch JN. 1938. The genus Septobasidium. Chapel Hill, North Carolina: UNC Press.
   Google Scholar
• Cummins GB, Hiratsuka Y. 2003. Illustrated genera of rust fungi. 3rd ed. St Paul, Minesota: American Phytopathological Society. 225 p.
   Google Scholar
• Doubles JC, McLaughlin DJ. 1991. A new basidiomycetous septal type: the multiperforate septum in Kriegeria eriophori. Am J Bot 78:1542–1548.
   Google Scholar
• Evans H. 1993. Studies on the rust Maravalia cryptostegiae, a potential biological control agent of rubber-vine weed (Cryptostegia grandiflora, Asclepiadaceae: Periplocoideae) in Australia, I: Life-cycle. Mycopathologia 124: 163–174.
   Google Scholar
• Fell JW, Boekhout T, Fonseca A, Sampaio JP. 2001. Basidiomycetous yeasts. In: McLaughlin DJ, McLaughlin EG, Lemke PA, eds. Systematics and evolution. Berlin: Springer-Verlag, The Mycota VII Part B: 3–35.
   Google Scholar
• Fitzpatrick HM. 1918. The life history and parasitism of Eocronartium muscicola. Phytopathology 8:197–218.
   Google Scholar
• Frieders EM. 1997. An integrated approach to understanding the moss parasites and their role in basidiomycete evolution [Doctoral thesis]. St Paul: University of Minnesota. 185 p.
   Google Scholar
• ———, McLaughlin DJ. 2001. The heterobasidiomycete moss parasites Jola and Eocronartium in culture: cytology, ultrastructure and anamorph. Mycol Res 105:734–744.
   Google Scholar
• ———, ———. 1996. Mitosis in the yeast phase of Agaricostilbum pulcherrimum and its evolutionary significance. Can J Bot 74:1392–1406.
   Google Scholar
• Gottschalk M, Blanz PA. 1985. Untersuchungen an 5S ribosomalen Ribonukleinsäuren als Beitrag zur Klärung von Systematik und Phylogenie der Basidiomyceten. Z Mykol 51:205–243.
   Google Scholar
• Hassouna N, Michot B, Bachellerie J. 1984. The complete nucleotide sequence of mouse 28S rRNA. Implications for the process of size increase of the large subunit rRNA in higher eukaryotes. Nucl Acid Res 12:3563–3583.
   Google Scholar
• Henk DA, Vilgalys R. 2006. Molecular phylogeny suggests a single origin of insect symbiosis in the Urediniomycetidae with support for some relationships within the genus Septobasidium. Am J Bot. (Accepted forPUBLICation).
   Google Scholar
• Hennen JF, Buriticá P. 1980. A brief summary of modern rust taxonomic and evolutionary theory. Rept Tottori Mycol Inst 18:243–256.
   Google Scholar
• ———, McCain JW. 1993. New species and records of Uredinales from the Neotropics. Mycologia 85:970–986.
   Google Scholar
• Kirk PM, Cannon PF, David JC, Stalpers JA. 2001. Dictionary of the fungi. 9th ed. Wallingford, UK: CABI. 655 p.
   Google Scholar
• Kirschner R, Begerow D, Oberwinkler F. 2001a. A new Chionosphaera species associated with conifer inhabiting bark beetles. Mycol Res 105:1403–1408.
   Google Scholar
• ———, Bauer R, Oberwinkler F. 2001b. Colacosiphon: a new genus described for a mycoparasitic fungus. Mycologia 93:634–644.
   Google Scholar
• Kramer CL. 1958. A new genus in the Protomycetaceae. Mycologia 50:916–926.
   Google Scholar
• Kropp BR, Corden ME. 1986. Morphology and taxonomy of Pachnocybe ferruginea. Mycologia 78:334–342.
   Google Scholar
• Laundon GF. 1973. Uredinales. In: Ainsworth CG, Sparrow FK, Sussman AS, eds. The fungi. New York: Academic Press, IVB:247–279.
   Google Scholar
• Linder DH. 1940. Evolution of the basidiomycetes and its relation to the terminology of the basidium. Mycologia 32:419–447.
   Google Scholar
• Lutz M, Bauer R, Begerow D, Oberwinkler F. 2004a. Tuberculina-Helicobasidium: host specificity of the Tuberculina-stage reveals unexpected diversity within the group. Mycologia 96:1316–1329.
   Google Scholar
• ———, ———, ———, ———. 2004b. Tuberculina-Thanatophytum/Rhizoctonia crocorum-Helicobasidium: a unique mycoparasitic-phytoparasitic life strategy. Mycol Res 108:227–238.
   Google Scholar
• ———, ———, ———, ———, Triebel D. 2004c. Tuberculina: rust relatives attack rusts. Mycologia 96:614–626.
   Google Scholar
• Lutzoni F, Kauff F, Cox CJ, 41 others. 2004. Assembling the Fungal Tree of Life: progress, classification and evolution of subcellular traits. Am J Bot 91:1446–1480.
   Google Scholar
• Maier W, Begerow D, Weiß M, Oberwinkler F. 2003. Phylogeny of the rust fungi: an approach using nuclear large subunit ribosomal DNA sequences. Can J Bot 81: 12–23.
   Google Scholar
• Marvanová L, Suberkropp K. 1990. Camptobasidium hydrophilum and its anamorph, Crucella subtilis: a new heterobasidiomycete from streams. Mycologia 82:208–217.
   Google Scholar
• McLaughlin DJ. 1990. A new cytoplasmic structure in the basidiomycete Helicogloea: the microscala. Expl Mycol 14:331–338.
   Google Scholar
• ———, Hanson Jr RW, Frieders EM, Swann EC, Szabo LJ. 2004. Mitosis in the yeast phase of the basidiomycetes Bensingtonia yuccicola and Stilbum vulgare and its phylogenetic implications. Am J Bot 91:808–815.
   Google Scholar
• Moore RT. 1990. Order Platygloeales ord. nov. Mycotaxon 39:245–248.
   Google Scholar
• Nishida H, Ando K, Ando Y, Hirata A, Sugiyama J. 1995. Mixia osmundae: transfer from the Ascomycota to the Basidiomycota based on evidence from molecules and morphology. Can J Bot 73(1):S660–S666.
   Google Scholar
• Oberwinkler F. 1989. Coccidiodictyon, new genus and Ordonia, two genera in the Septobasidiales. Op Bot 100:185–192.
   Google Scholar
• ———, Bandoni RJ. 1982. A taxonomic survey of the gasteroid, auricularioid Heterobasidiomycetes. Can J Bot 60:1726–1750.
   Google Scholar
• ———, Bauer R. 1989. The systematics of gasteroid, auricularioid Heterobasidiomycetes. Sydowia 41:224–256.
   Google Scholar
• ———, ———. 1990. Cryptomycocolax: a new mycoparasitic heterobasidiomycete. Mycologia 82:671–692.
   Google Scholar
• ———, ———, Bandoni RJ. 1990a. Colacogloea: a new genus in the auricularioid Heterobasidiomycetes. Can J Bot 68:2531–2536.
   Google Scholar
• ———, ———, ———. 1990b. Heterogastridiales: a new order of Basidiomycetes. Mycologia 82:48–58.
   Google Scholar
• Olive LS. 1943. Cytology of various basidial types in the genus Septobasidium. Mycologia 35:557–572.
   Google Scholar
• Ono Y, Hennen JF. 1983. Taxonomy of the chaconiaceous genera (Uredinales). Trans Mycol Soc Jap 24: 369–402.
   Google Scholar
• Pore RS, Sorenson WG. 1990. Reniforma strues, a new yeast from wastewater. Mycologia 82:549–553.
   Google Scholar
• Prillinger H, Lopandic K, Schweigkofler W, Deak R, Aarts HJM, Bauer R, Sterflinger K, Kraus GF, Maraz A. 2002. Phylogeny and systematics of the fungi with special reference to the Ascomycota and Basidiomycota. In: Breitenbach M, Crameri R, Lehrer SB, eds., Fungal allergy and pathogenicity. Chem Immunol vol 81. 207–295.
   Google Scholar
• Sampaio JP. 2004. Diversity, phylogeny and classification of basidiomycetous yeasts. In: Agerer R, Piepenbring M, Blanz P, eds. Frontiers in Basidiomycote mycology. Eching, Germany: IHW-Verlag. p 49–80.
   Google Scholar
• ———, Gadanho M, Bauer R, Weiß M. 2003. Taxonomic studies in the Microbotryomycetidae: Leucosporidium golubevii sp. nov., Leucosporidiella gen. nov. and the new orders Leucosporidiales and Sporidiobolales. Mycol Prog 2:53–68.
   Google Scholar
• Savile DBO. 1955. A phylogeny of the Basidiomycetes. Can J Bot 33:60–104.
   Google Scholar
• Swann EC, Frieders EM, McLaughlin DJ. 1999. Microbotryum, Kriegeria and the changing paradigm in basidiomycete classification. Mycologia 91:51–66.
   Google Scholar
• ———, ———, ———. 2001. Urediniomycetes. In: McLaughlin DJ, McLaughlin EG, Lemke PA, eds. Systematics and evolution. Berlin: Springer-Verlag, The Mycota VII Part B: 37–56.
   Google Scholar
• ———, Taylor JW. 1993. Higher taxa of basidiomycetes: an 18S rRNA gene perspective. Mycologia 85:923–936.
   Google Scholar
• ———, ———. 1995. Phylogenetic perspectives on basidiomycete systematics: evidence from the 18S rRNA gene. Can J Bot 73:S862–S868.
   Google Scholar
• Thirumalachar MJ. 1941. Tuberculina on Uromyces hobsonii Vize. J Indian Bot Soc 20:107–110.
   Google Scholar
• Walker WF. 1984. 5S rRNA sequences from Atractiellales, and basidiomycetous yeasts and fungi imperfecti. Sys Appl Microbiol 5:352–359.
   Google Scholar
• Weiß M, Bauer R, Begerow D. 2004. Spotlights on heterobasidiomycetes. In: Agerer R, Piepenbring M, Blanz P, eds. Frontiers in Basidiomycote mycology. Eching, Germany: IHW-Verlag. p 7–48.
   Google Scholar
• Wingfield BD, Ericson L, Szaro T, Burdon JJ. 2004. Phylogenetic patterns in the Uredinales. Australas Plant Pathol 33:327–335.
   Google Scholar