Phylogenetic relationships of Japanese species of Heterobasidion—H. annosum sensu lato and an undetermined Heterobasidion sp.

LITERATURE CITED

• Aoshima K. 1952. Butt-rot of Abies mariesii and A. veichii caused by Tyromyces balsameus and Fomitopsis annosa. J Jap For Soc 34:305–307.
   Google Scholar
• Asiegbu FO, Abu S, Stenlid J, Johansson M. 2004. Sequence polymorphism and molecular characterization of laccase genes of the conifer pathogen Heterobasidion annosum. Mycol Res 108:136–148.
   Google Scholar
• Bendz-Hellgren M, Lipponen K, Solheim H, Thomsen IM. 1998. The Nordic countries. In: Woodward S, Stenlid J, Karjalainen R, Hüttermann A, eds. Heterobasidion annosum: biology, ecology, impact and control. Wallingford, UK: CAB International. p 333–345.
   Google Scholar
• Binder M, Hibbett DS. 2002. Higher-level phylogenetic relationships of homobasidiomycetes (mushroom-forming fungi) inferred from four rDNA regions. Mol Phyl Evol 22:76–90.
   Google Scholar
• Buchanan PK. 1988. A new species of Heterobasidion (Polyporaceae) from Australasia. Mycotaxon 32:325–337.
   Google Scholar
• Corner EJH. 1989. Ad Polyporaceas V. Berlin-Stuttgart, Germany: J. Cramer. 219 p.
   Google Scholar
• Dai Y-C, Vainio EJ, Hantula J, Niemelä T, Korhonen K. 2002. Sexuality and intersterility within the Heterobasidion insulare complex. Mycol Res 106:1435–1448.
   Google Scholar
• ———, ———, ———, ———, ———. 2003. Investigation on Heterobasidion annosum s. l. in central and eastern Asia with the aid of mating tests and DNA fingerprinting. For Pathol 33:269–286.
   Google Scholar
• Farjon A. 1990. Pinaceae. Drawings and descriptions of the genera. Köningstein, Germany: Koeltz Scientific Books. 330 p.
   Google Scholar
• Felsenstein J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783–791.
   Google Scholar
• Garbelotto M, Ratclff A, Bruns TD, Cobb FW, Otrosina WJ. 1998. The European S and F intersterility groups of Heterobasidion annosum may represent sympatric protospecies. Can J Bot 76:397–409.
   Google Scholar
• Harrington TC, Stenlid J, Korhonen K. 1998. Evolution in the genus Heterobasidion. In: Delatour C, Guillaumin JJ, Lung-Escarmant B, Marcais B, eds. Root and butt rots of forest trees. 9th International Conference on Root and Butt Rot. Paris, France: INRA. INRA Editions vol 89: 63–74.
   Google Scholar
• Hattori T. 2003. Type studies of the polypores described by E.J.H. Corner from Asia and west Pacific areas, VI. Species described in Tyromyces (3), Cristelloporia, Grifola, Hapalopilus, Heterobasidion, Ischnoderma, Loweporus and Stecchericium. Mycoscience 44:453–463.
   Google Scholar
• Ito S. 1955. Mycological flora of Japan. Vol. II, Basidiomycetes No. 4. Tokyo: Yokendo. 450 p. (in Japanese)
   Google Scholar
• Jeanmougin F, Tompson JD, Gouy M, Higgins DG, Gibson TJ. 1998. Multiple sequence alignment with Clustal X. Trend Biochem Sci 23:403–405.
   Google Scholar
• Johannesson H, Stenlid J. 2003. Molecular markers reveal genetic isolation and phylogeography of the S and F intersterility groups of the wood-decay fungus Heterobasidion annosum. Mol Phyl Evol 29:94–101.
   Google Scholar
• Kamei S, Hoshi S. 1948. On the brown root and butt rot of conifers in the national forest of Akan, Hokkaido. Res Bull Coll Expt Forest Hokkaido 14:144–175. (in Japanese with English summary)
   Google Scholar
• Karlsson J-O, Stenlid J. 1991. Pectic isozyme profiles of intersterility groups in Heterobasidion annosum. Mycol Res 95:531–536.
   Google Scholar
• Korhonen K, Capretti P, Karjalainen R, Stenlid J. 1998. Distribution of Heterobasidion annosum intersterility groups in Europe. In: Woodward S, Stenlid J, Karjalainen R, Hüttermann A, eds. Heterobasidion annosum. Biology, ecology, impact and control. Wallingford, UK: CAB International. p 93–104.
   Google Scholar
• ———, Fedorov NI, La Porta N, Kovbasa NP. 1997. Abies sibrica in Ural region is attacked by the S type of Heterobasidion annosum. Eur J For Path 27:273–281.
   Google Scholar
• ———, Stenlid J. 1998. Biology of Heterobasidion annosum. In: Woodward S, Stenlid J, Karjalainen R, Hüttermann A, eds. Heterobasidion annosum. Biology, ecology, impact and control. Wallingford, UK: CAB International. p 43–70.
   Google Scholar
• La Porta N, Capretti P, Korhonen K, Kammiovirta K, Karjalainen R. 1997. The relatedness of the Italian F intersterility group of Heterobasidion annosum with the S group, as revealed by RAPD assay. Mycol Res 101: 1065–1072.
   Google Scholar
• Maijala P, Harrington TC, Raudaskoski M. 2003. A peroxidase gene family and gene trees in Heterobasidion and related genera. Mycologia 95:209–221.
   Google Scholar
• Mitchelson K, Korhonen K. 1998. Diagnosis and differentiation of intersterility groups. In: Woodward S, Stenlid J, Karjalainen R, Hüttermann A, eds. Heterobasidion annosum. Biology, ecology, impact and control. Wallingford, UK: CAB International. p 71–92.
   Google Scholar
• Niemelä T, ———. 1998. Taxonomy of the genus Heterobasidion. In: Woodward S, Stenlid J, Karjalainen R, Hüttermann A., eds. Heterobasidion annosum. Biology, ecology, impact and control. Wallingford, UK: CAB International. p 27–33.
   Google Scholar
• Núñez M, Ryvarden L. 2001. East Asian polypores. Vol. 2. Synopsis Fungorum 14. Oslo, Norway: Fungiflora. 522 p.
   Google Scholar
• Ono K, Yokota S. 1959. Infection tests using Heterobasidion annosum on Abies sachalinensis. Jap For Res 41:495–497. (in Japanese)
   Google Scholar
• Otrosina WJ, Chase TE, Cobb FW, Korhonen K. 1993. Population structure of Heterobasidion annosum from North America and Europe. Can J Bot 71:1064–1071.
   Google Scholar
• Posada D, Crandall KA. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics 14:817–818.
   Google Scholar
• ———, ———. 2005. Modeltest 3.7. Program distributed by the author. Universidad de Vigo, Spain.
   Google Scholar
• Sanderson MJ, Shaffer H. 2002. Troubleshooting of molecular phylogenetic analyses. Ann Rev Ecol Syst 33:49–72.
   Google Scholar
• Suyama Y, Yoshimaru H, Tsumura Y. 2000. Molecular phylogenetic position of Japanese Abies (Pinaceae) based on chloroplast DNA sequences. Mol Phyl Evol 16:271–277.
   Google Scholar
• Swofford DL. 2001. PAUP 4.0: phylogenetic analysis using parsimony. Beta version 8. Sunderland, Massachusetts: Sinauer Associates.
   Google Scholar
• Tokuda S, Ota Y, Hattori T. 2007. Root and Butt rot of Todo fir (Abies sachalinensis) caused by Heterobasidion annosum sensu lato in Hokkaido, Japan. For Path (In press).
   Google Scholar
• Vidaković M. 1991. Conifers. Morphology and variation. Wallingford, UK: CAB International. 756 p.
   Google Scholar
• Yokota S. 1956. Observation on the butt Rot of Sakhalin fir (Abies sachalinensis Mast.) in the Tokyo University Forest, Hokkaido, with special reference to infection and propagation of decay. Bull Tokyo Univ For 52:165–171.
   Google Scholar