229
Views
18
CrossRef citations to date
0
Altmetric
Original Articles

Molecular and morphological characterization of Pyricularia and allied genera

, , , , , & show all
Pages 1002-1011 | Accepted 29 Aug 2004, Published online: 27 Jan 2017

LITERATURE CITED

  • Asuyama H. 1965. Morphology, taxonomy, host range, and life cycle of Piricularia oryzae. In: Chandler RF Jr., ed. The rice blast disease. USA: Johns Hopkins Press. p 9–22.
  • Bailey AG, van Eijnatten C. 1961. Corn gray spot caused by Pyricularia grisea. Phytopathology 51:197–198.
  • Borromeo ES, Nelson RJ, Bonman JM, Leung H. 1993. Genetic differentiation among isolates of Pyricularia infecting rice and weed hosts. Phytopathology 83: 393–399.
  • Bruns TD, White TJ, Taylor JW. 1991. Fungal molecular systematics. Ann Rev Ecol Syst 22:525–564.
  • Bryan GT, Daniels MJ, Osbourn AE. 1995. Comparison of fungi within the Gaeumannomyces-Phialophora complex by analysis of ribosomal DNA sequences. Appl Environm Microb 61:681–689.
  • Bussaban B, Lumyong S, Lumyong P, McKenzie EHC, Hyde KD. 2001a. Endophytic fungi from Amomum siamense. Canad J Microbiol 47:943–948.
  • ———, ———, ———, ———, ———. 2001b. Endophytic fungi from Zingiberaceae: Alpinia malaccensis. Phytopathology 91:S104.PUBLICation P-2001-0023-MSA.
  • ———, ———, ———, ———, ———. 2001c. Two new species of endophytes (ascomycetes) from Zingiberaceae sporulating in culture. Nova Hedw 73:487–493.
  • ———, ———, ———, ———, ———. 2003. Three new species of Pyricularia are isolated as Zingiberaceous endophytes from Thailand. Mycologia 95:521–526.
  • Cai L, Tsui CKM, Zhang K, Hyde KD. 2002. Aquatic fungi from Lake Fuxian, Yunnan, China. Fungal Diversity 9:57–70.
  • Carbone I, Kohn LM. 1993. Ribosomal DNA sequence divergence within internal transcribed spacers 1 of the Sclerotiniaceae. Mycologia 85:415–427.
  • Carmichael JW, Kendrick WB, Conners IL, Sigler L. 1980. Genera of Hyphomycetes. Alberta, Canada: University of Alberta Press. 386 p.
  • Cavara F. 1892. Contributzione alla micologia lombarda. Atti Ist Bot Univer Lab Crittogam Pavia Ser 2, 2:207–292.
  • Chen D, Zeigler RS, Leung H, Nelson RJ. 1995. Population structure of Pyricularia grisea at two screening sites in the Philippines. Phytopathology 85:1011–1020.
  • Couch BC, Kohn LM. 2002. A multilocus gene genealogy concordant with host preference indicates segregation of a new species, Magnaporthe oryzae, from M. grisea. Mycologia 94:683–693.
  • de Hoog GS. 1985. Taxonomy of the Dactylaria complex, IV. Dactylaria, Neta, Subulispora and Scolecobasidium. Stud Mycol 26:1–60.
  • ———, von Arx JA. 1973. Revision of Scolecobasidium and Pleurophragmium. Kavaka 1:55–60.
  • Egger KN, Sigler L. 1993. Relatedness of the ericoid endophytes Scytalidium vaccinii and Hymenoscyphus ericae inferred from analysis of ribosomal DNA. Mycologia 85:219–230.
  • Ellis MB. 1971. Dematiaceous hyphomycetes. Kew, England: Commonwealth Mycological Institute. 680 p.
  • ———. 1976. More dematiaceous hyphomycetes. Kew, England: Commonwealth Mycological Institute. 507 p.
  • Felsenstein J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783–791.
  • Gams W. 2000. Phialophora and some similar morphologically little-differentiated anamorphs of divergent ascomycetes. Stud Mycol 45:187–199.
  • George MLC, Nelson RJ, Zeigler RS, Leung H. 1998. Rapid Population analysis of Magnaporthe grisea by using rep-PCR and endogenous repetitive DNA sequences. Phytopathology 88:223–229.
  • Goh TK, Hyde KD. 1997. A revision of Dactylaria, with description of D. tunicata sp. nov. from submerged wood in Australia. Mycol Res 101:1265–1272.
  • Goodwin SB, Levy M, CavalettoJR, Tian Y. 2003. Phylogenetic analyses place Magnaporthe grisea in the order Diaporthales and suggest rapid speciation. 8th International Congress of Plant Pathology. Christchurch, New Zealand, Abstracts, vol vol. 2, p 349.
  • Guadet J, Julien J, Lafay JF, Brygoo Y. 1989. Phylogeny of some Fusarium species as determined by large-subunit rRNA sequence comparison. Mol Biol Evol 6:227–242.
  • Hashioka Y. 1971. Notes on Pyricularia I. Three species parasitic to Musaceae, Cannaceae and Zingiberaceae. Trans Mycol Soc Japan 12:126–135.
  • Hashioka Y. 1973. Notes on Pyricularia II. Four species and one variety parasitic to Cyperaceae, Gramineae and Commelinaceae. Trans Mycol Soc Japan 14:256–265.
  • Hawksworth DL, Kirk MP, Sutton BC, Pegler DN. 1995. Dictionary of the fungi. 8th ed. Surrey, England: CAB International. 616 p.
  • Hebert TT. 1971. The perfect stage of Pyricularia grisea. Phytopathology 61:83–87.
  • Ho WH, Yanna, Hyde KD, Hodgkiss IJ. 2002. Seasonality and sequential occurrence of fungi on wood submerged in Tai Po Kau Forest Stream, Hong Kong. Fungal Diversity 10:21–43.
  • Hughes SJ. 1958. Revisiones hyphomycetum aliquot cum appendice de nominibus rejiciendis. Can J Bot 36:727–836.
  • Ingold CT. 1943. Further observations on aquatic hyphomycetes of decaying leaves. Trans Brit Mycol Soc 26: 105–115.
  • Kato H, Yamaguchi T, Nishihara N. 1976. The perfect stage of Pyricularia oryzae Cav. in culture. Ann Phytopath Soc Japan 42:507–510.
  • ———, Yamamoto M, Yamaguchi-Ozaki T, Kadouchi H, Iwamoto Y, Nakayashiki H, Tosa Y, Mayama S, Mori N. 2000. Pathogenicity, mating ability and DNA restriction fragment length polymorphisms of Pyricularia populations isolated from Gramineae, Bambusideae and Zingiberaceae plants. J Gen Plant Pathol 66:30–47.
  • Kim WK, Mauthe W, Hausner G, Klassen GR. 1990. Isolation of high molecular weight DNA and double-stranded RNAs from fungi. Can J Bot 68:1898–1902.
  • Kirk PM, Cannon PF, David JC, Stalpers JA. 2001. Dictionary of the fungi. 9th ed. Surrey, England: CAB International. 655 p.
  • Kotani S, Kurata M. 1992. Black blotch of rhizome by Pyricularia zingiberi Nishikado. Ann Phytopath Soc Japan 58:469–472.
  • Kuhls K, Lieckfeldt E, Samuels GJ, Meyer W, Kubicek CP, Börner T. 1997. Revision of Trichoderma sect. Longibrachiatum including related teleomorphs based on analysis of ribosomal DNA internal transcribed spacer sequences. Mycologia 89:442–460.
  • Lebrun MH, Capy MP, Garcia N, Dutertre M, Brygoo Y, Notteghem JL, Vales M. 1991. Biology and genetics of Pyricularia oryzae and P grisea populations: current situation and development of RFLP markers. In: Rice genetics 2. Proceedings of the Second International Rice Genetics Symposium. IRRI. Los Banos, Laguna, Philippines, p 487–497.
  • Levy M, Ramao J, Marchetti MA, Hamer JE. 1991. DNA fingerprinting with a dispersed repeated sequence resolves pathotype diversity in the rice blast fungus. Plant Cell 3:95–102.
  • Liou GY, Tzean SS. 1997. Phylogeny of the genus Arthrobotrys and allied nematode-trapping fungi based on rDNA sequences. Mycologia 89:876–884.
  • Luo J, Yin JF, Cai L, Zhang KQ, Hyde KD. 2004. Freshwater fungi in Lake Dianchi, a heavily polluted lake in Yunnan, China. Fungal Diversity 16:93–112.
  • Malca MI, Owen JH. 1957. The gray leaf spot disease of St Augustine grass. Plant Dis Rep 41:874–875.
  • Marvanová L, Descals E. 1987. New taxa and new combinations of “aquatic hyphomycetes”. Trans Brit Mycol Soc 89:499–507.
  • Matsuyama N, Kato H, Yamaguchi T. 1977. Comparison of the isozyme patterns of extracellular enzymes in Pyricularia strains from gramineous and zingiberaceous plants. Ann Phytopath Soc Japan 43:419–425.
  • Meredith DS. 1963. Pyricularia grisea (Cooke) Sacc. causing pitting disease of bananas in central America. I. Preliminary studies on pathogenicity. Ann Appl Biol 52:453–463.
  • Nicholas KB, Nicholas HB Jr. 1997. GeneDoc: a tool for editing and annotating multiple sequence alignments. http://www.psc.edu/biomed/genedoc
  • Nishikado Y. 1917. Studies on the rice blast fungus. I. Ber Ohara Inst Landwirtsch Forsch 1:171–217.
  • Ou SH. 1987. Rice diseases. 2nd ed. Kew, England: CAB International. 380 p.
  • Pappas AC, Paplomatas EJ. 1998. Pyricularia leaf spot: a new disease of ornamental plants of the family Marantaceae. Plant Dis 82:465–469.
  • Paulus B, Gadek P, Hyde KD. 2003. Two new species of Dactylaria (anamorphic fungi) and an update of species in Dactylaria sensu lato. Fungal Diversity 14:157–170.
  • Prasada R, Goyal JP. 1970. A new species of Pyricuaria on Bajra. Curr Sci 39:287–288.
  • Rathaiah Y. 1980. Leaf blast of turmeric. Plant Dis 64: 104–105.
  • Rehner SR, Samuels GJ. 1994. Taxonomy and phylogeny of Gliocladium analyzed by large subunit rDNA sequences. Mycol Res 98:625–634.
  • ———, ———. 1995. Molecular systematics of the Hypocreales: a teleomorph gene phylogeny and the status of their anamorphs. Can J Bot 73:S816–S823.
  • Rossman AY, Howard RJ, Valent B. 1990. Pyricularia grisea, the correct name for the rice blast disease fungus. Mycologia 82:509–512.
  • ———, Farr DF, Castlebury LA. 2001. Phylogenetic relationships among obscure microfungi: Why does it matter? Phytopathology 91:S164.PUBLICation P-2001-0119-MSA.
  • Saccardo PA. 1880. Fungorum extra-europaeorum Pugillus. Michelia 2:136–149.
  • Sambrook J, Fritsch EF, Maniatis T. 1989. Molecular cloning: a laboratory manual. 2nd ed. New York, USA: Cold Spring Harbor Press. 1592 p.
  • Sarbajna KK. 1990. New species of Mycovellosiella and Pyricularia from West Bengal. J Mycopath Res 28: 159–164.
  • Shull V, Hamer JE. 1994. Genomic structure and variability in Pyricularia grisea. In: Zeigler R, Leong SA, Teng PS.., eds. Rice blast disease. Wallingford, England: CAB International. p 65–86.
  • Sivichai S, Jones EBG, Jones NLH. 2002. Lignicolous freshwater higher fungi with reference to their teleomorph and anamorph stages. In: Watling R, Frankland JC, Ainsworth AM, Isaac S, Robinson CH. eds. Tropical mycology. Wallingford, England: CAB International. p 41–49.
  • Sprague R. 1950. Disease of cereals and grasses in North America. New York, USA: Ronald Press. 538 p.
  • Swofford DL. 2002. PAUP*: Phylogenetic Analysis Using Parsimony (*and other methods), beta version 4.0b10. Sunderland, Massachusetts: Sinauer Associates.
  • Thompson JD, Higgins DG, Gibson TJ. 1994. Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nuc Acids Res 22:4673–4680.
  • Walker J. 1980. Gaeumannomyces, Linocarpon, Ophiobolus and several other genera of scolecospored ascomycetes and phialophora conidial states, with a note on hyphopodia. Mycotaxon 11:1–129.
  • Ward E, Bateman GL. 1999. Comparison of Gaeumannomyces- and Phialophora-like fungal pathogens from maize and other plants using DNA methods. New Phytol 141:323–331.
  • Wells HD, Burton GW, Powell JB. 1969. Piricularia leaf spot of pearl millet. Phytopathology 59:1057.
  • White TJ, Bruns TD, Lee S, Taylaor JW. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ., eds. PCR protocols: a guide to methods and applications. San Diego: Academic Press. p 315–322.
  • Yaegashi H. 1977. On the sexuality of blast fungi, Pyricularia spp. Ann Phytopath Soc Japan 43:432–439.
  • Zhu H, Jiang W, Wang J, Lei C, Ling Z, Zhu L. 1992. DNA fingerprint and pathotype characterization of Pyricularia oryzae isolates. Mycosystema 5:89–98.
  • Zucconi L, Onofri S, Persiani AM. 1984. Rare or interesting hyphomycetes from tropical forest litter. II. Pyricularia fusispora comb. nov., a new species combination for the species Nakataea fusispora. Mic Ital 2:7–10.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.