Overlapping functions of RBBP4 and RBBP7 in regulating cell proliferation and histone H3.3 deposition during mouse preimplantation development

References

• Wilcox AJ, Harmon Q, Doody K, et al. Preimplantation loss of fertilized human ova: estimating the unobservable. Hum Reprod. 2020;35(4):743–750.
   Google Scholar
• Reese ST, Franco GA, Poole RK, et al. Pregnancy loss in beef cattle: a meta-analysis. Anim Reprod Sci. 2020;212:106251.
   Google Scholar
• Wiltbank MC, Baez GM, Garcia-Guerra A, et al. Pivotal periods for pregnancy loss during the first trimester of gestation in lactating dairy cows. Theriogenology. 2016;86(1):239–253.
   Google Scholar
• Rossant J. Genetic Control of early cell lineages in the mammalian embryo. Annu Rev Genet. 2018;52(1):185–201.
   Google Scholar
• Eckersley-Maslin MA, Alda-Catalinas C, Reik W. Dynamics of the epigenetic landscape during the maternal-to-zygotic transition. Nat Rev Mol Cell Biol. 2018;19(7):436–450.
   Google Scholar
• Zhao PP, Wang HN, and Wang H, et al. Essential roles of HDAC1 and 2 in lineage development and genome-wide DNA methylation during mouse preimplantation development. Epigenetics-Us. 2020;15(4):369–385.
   Google Scholar
• Andreu-Vieyra CV, Chen RH, Agno JE, et al. MLL2 is required in oocytes for bulk histone 3 lysine 4 trimethylation and transcriptional silencing. Plos Biol. 2010;8(8):e1000453.
   Google Scholar
• Zhao PP, Li S, Wang HA, et al. Sin3a regulates the developmental progression through morula-to-blastocyst transition via Hdac1. Faseb J. 2019;33(11):12541–12553.
   Google Scholar
• Matoba S, Liu Y, Lu F, et al. Embryonic development following somatic cell nuclear transfer impeded by persisting histone methylation. Cell. 2014;159(4):884–895.
   Google Scholar
• Yw Q, Yc W, Re H Jr., et al. A retinoblastoma-binding protein related to a negative regulator of Ras in yeast. Nature. 1993;364(6438):648–652.
   Google Scholar
• Qian YW, Lee EY. Dual retinoblastoma-binding proteins with properties related to a negative regulator of ras in yeast. J Biol Chem. 1995;270(43):25507–25513.
   Google Scholar
• Murzina NV, Pei XY, Zhang W, et al. Structural basis for the recognition of histone H4 by the histone-chaperone RbAp46. Structure. 2008;16(7):1077–1085.
   Google Scholar
• Laugesen A, Helin K. Chromatin repressive complexes in stem cells, development, and cancer. Cell Stem Cell. 2014;14(6):735–751.
   Google Scholar
• Miao X, Sun T, Barletta H, et al. Loss of RBBP4 results in defective inner cell mass, severe apoptosis, hyperacetylated histones and preimplantation lethality in micedagger. Biol Reprod. 2020;103(1):13–23.
   Google Scholar
• Nicolas E, Morales V, Magnaghi-Jaulin L, et al. RbAp48 belongs to the histone deacetylase complex that associates with the retinoblastoma protein. J Biol Chem. 2000;275(13):9797–9804.
   Google Scholar
• Buchkovich K, Duffy LA, Harlow E. The retinoblastoma protein is phosphorylated during specific phases of the cell-cycle. Cell. 1989;58(6):1097–1105.
   Google Scholar
• Zenker J, White MD, Templin RM, et al. A microtubule-organizing center directing intracellular transport in the early mouse embryo. Science. 2017;357(6354):925–928.
   Google Scholar
• Nicolas E, Morales V, Magnaghi-Jaulin L, et al. RbAp48 belongs to the histone deacetylase complex that associates with the retinoblastoma protein. J Biol Chem. 2000;275(13):9797–9804.
   Google Scholar
• Zhang Y, Ng HH, Erdjument-Bromage H, et al. Analysis of the NuRD subunits reveals a histone deacetylase core complex and a connection with DNA methylation. Genes Dev. 1999;13(15):1924–1935.
   Google Scholar
• Martire S, Gogate AA, Whitmill A, et al. Phosphorylation of histone H3.3 at serine 31 promotes p300 activity and enhancer acetylation. Nat Genet. 2019;51(6):941-+.
   Google Scholar
• Leatham-Jensen M, Uyehara CM, Strahl BD, et al. Lysine 27 of replication-independent histone H3.3 is required for Polycomb target gene silencing but not for gene activation. Plos Genet. 2019;15(1):e1007932.
   Google Scholar
• Ishiuchi T, Abe S, Inoue K, et al. Reprogramming of the histone H3.3 landscape in the early mouse embryo. Nat Struct Mol Biol. 2021;28(1):38–49.
   Google Scholar
• Balboula AZ, Stein P, Schultz RM, et al. Knockdown of RBBP7 unveils a requirement of histone deacetylation for CPC function in mouse oocytes. Cell Cycle. 2014;13(4):600–611.
   Google Scholar
• Huang C, Zhu B. H3.3 turnover: a mechanism to poise chromatin for transcription, or a response to open chromatin? Bioessays. 2014;36(6):579–584.
   Google Scholar
• Chen P, Zhao JC, Wang Y, et al. H3.3 actively marks enhancers and primes gene transcription via opening higher-ordered chromatin. Gene Dev. 2013;27(19):2109–2124.
   Google Scholar
• Love MI, Huber W, Anders S. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol. 2014;15(12):550.
   Google Scholar
• Patro R, Duggal G, Love MI, et al. Salmon provides fast and bias-aware quantification of transcript expression. Nat Methods. 2017;14(4):417–419.
   Google Scholar
• Sahraeian SME, Mohiyuddin M, Sebra R, et al. Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis. Nat Commun. 2017;8(1):59.
   Google Scholar
• Brind’Amour J, Liu S, and Hudson M, et al. An ultra-low-input native ChIP-seq protocol for genome-wide profiling of rare cell populations. Nat Commun. 2015;6;6033.
   Google Scholar
• Bolger AM, Lohse M, Usadel B. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 2014;30(15):2114–2120.
   Google Scholar