Genetic diversity of seed storage proteins in diploid, tetraploid and hexaploid Avena species

References

• Ahmad F, Slinkard AE. 1992. Genetic relationships in the genus Cicer L. as revealed by polyacrylamide gel eletrophoresis of seed storage proteins. Thero Appl Genet. 84:688–692.
   PubMed Web of Science ®Google Scholar
• Arslan E, Ertugrul K. 2010. Genetic relationships of the genera Onobrychis, Hedysarum and Sartoria using seed storage proteins. Turk J Biol. 34: 67–73.
   Web of Science ®Google Scholar
• Badaeva ED, Shelukhina OY, Goryunova SV, Loskutov IG, Pukhalskiy VA. 2010. Phylogenetic relationships of tetraploid AB genome Avena species evaluated by means of cytogenetic (C-banding and FISH) and RAPD analyses. J. Bot. 2010: 1–13.
   Google Scholar
• Barrett BA, Kidwell KK. 1998. AFLP-based genetic diversity assessment among wheat cultivars from the Pacific Northwest. Crop Sci. 38(5): 1261–1271.
   Web of Science ®Google Scholar
• Baum BR. 1977. Oats: wild and cultivated: A a monograph of the genus Avena L. (Poaceae). Minister of Supply and Services Canada, Ottawa, (Ontario): Agriculture Canada.
   Google Scholar
• Bianchi-Hall CM, Keys RD, Stalker HT, Murphy PJ. 1993. Diversity of seed storage protein patterns in wild peanut (Arachis, Fabaceae) species. Plant Syst Evol. 186: 1–15.
   Web of Science ®Google Scholar
• Bushra Mirza, Mohammad Shoaib, Munawar Ahmad, Fu BY. 2007. Genetic diversity in Pakistani populations of Avena fatua revealed by seed storage protein polymorphism. Communications in Biometry and Crop Science. 2(1): 41–48.
   Google Scholar
• Dong P, Liu H, Li W, Qi PF, Wei YM, Zheng YL. 2007. Genetic diversity of storage proteins in Triticum polonicum L. Journal of Plant Sciences. 2(4): 416–424.
   Google Scholar
• Drossou A, Katsiotis A, Leggett JM, Loukas M, Tsakas S. 2004. Genome and species relationships in genus Avena based on RAPD and AFLP molecular markers. Theor Appl Genet. 109: 48–54.
   Web of Science ®Google Scholar
• Dvořáček V, Čurn V, Moudrý J. 2003. Suitability of oat-seed storage-protein markers for identification of cultivars in grain and mixed flour samples. Plant Soil Environ. 49(11): 486–491.
   Web of Science ®Google Scholar
• Ertugrul K, Arslan E, Tugay O. 2010. Characterization of Consolida S.F. Gray (Ranunculaceae) taxa in Turkey by seed storage protein electrophoresis. Turk J Biochem. 35(2): 99–104.
   Google Scholar
• Frascaroli E, Schrag TA, Melchinger AE. 2013. Genetic diversity analysis of elite European maize (Zea mays L.) inbred lines using AFLP, SSR, and SNP markers reveals ascertainment bias for a subset of SNPs. Theor Appl Genet. 126(1): 133–141.
   PubMed Web of Science ®Google Scholar
• Fu YB, Kibite S, Richards KW. 2004. Amplified fragment length polymorphism analysis of 96 Canadian oat cultivars released between 1886 and 2001. Can J Plant Sci. 84:23–30.
   Web of Science ®Google Scholar
• Fu YB, Peterson GW, Williams D, Richards KW, Fetch JM. 2005. Patterns of AFLP variation in a core subset of cultivated hexaploid oat germplasm. Theor Appl Genet. 111:530–539.
   PubMed Web of Science ®Google Scholar
• Fu YB, Williams DJ. 2008. AFLP variation in 25 Avena species. Theor Appl Genet. 117: 333–342.
   PubMed Web of Science ®Google Scholar
• Gepts P. 1989. Genetic diversity of seed storage proteins in plants. In: Brown AHD, Clegg MT, Kahler AL, Weir BS. editors. Breeding and Genetic Resources. Sunderland, (Massachusetts): Sinauer Associates Inc.; p. 64–82.
   Google Scholar
• Ghafoor A, Ahmad Z, Qureshi AS, Bashir M. 2002. Genetic relationship in Vigna mungo (L.) Hepper and V. radiate (L.) R. Wilczek based on morphological traits and SDS-PAGE. Euphytica. 123: 367–378.
   Web of Science ®Google Scholar
• Harder DE, Chong J, Brown PD, Sebesta J, Fox S. 1992. Wild oat as a source of disease resistance: history, utilization and prospects. In: Barr AR, Medd RW, editors. Wild Oats in World Agriculture. Proceedings of the 4th International Oat Conference, vol II. Adelaide, (Australia).; p. 71–81.
   Google Scholar
• Irigoyen ML, Ferrer E, Loarce Y. 2006. Cloning and Characterization of Resistance Gene analogs from Avena species. Genome. 49: 54–63.
   PubMed Web of Science ®Google Scholar
• Javaid A, Ghafoor A, Anwar R. 2004. Seed storage protein eletrophoresis in groundnut for evaluating genetic diversity. Pak J Bot. 36(1): 25–29.
   Web of Science ®Google Scholar
• Jellen EN, Gill BS, Cox TS. 1994. Genomic in situ hybridization differentiates between A/D- and C-genome chromatin and detects intergenomic translocations in polyploid oat species (genus Avena). Genome. 37: 613–618.
   PubMed Web of Science ®Google Scholar
• Jellen EN, Leggett JM. 2006. Cytogenetic manipulation in oat improvement. In: Singh RJ, Jauhar PP, editors. Genetic resources, chromosome engineering, and crop improvement, cereals. vol 2. Boca Raton: Taylor and Francis; p. 199–231.
   Google Scholar
• Katsiotis A, Loukas M, Heslop-Harrison JS. 1997. The close relationship between the A and B genomes in Avena L. (Poaceae) determined by molecular cytogenetic analysis of total genomic, tandemly and dispersed repetitive DNA sequences. Ann Bot. 79: 103–109.
   Web of Science ®Google Scholar
• Khan SA, Shinwari ZK, Rabbani MA. 2013. Study of total seed protein pattern of rice (Oryza sativa L.) breeding lines of Pakistan through SDS-PAGE. Pak. J. Bot. 45(3): 871–876.
   Web of Science ®Google Scholar
• Ladizinsky G. 1998. A new species of Avena from Sicily, possibly the tetraploid progenitor of hexaploid oats. Genet Resour Crop Evol. 45:263–269.
   Web of Science ®Google Scholar
• Ladizinsky G. 2012. Studies in Oat oat Evolutionevolution. Berlin: Springer Berlin Heidelberg.
   Google Scholar
• Ladizinsky G, Johnson L. 1972. Seed protein homologies and the evolution of polyploidy in Avena. Can J Genet Cytol. 14: 875–888.
   Google Scholar
• Laemmli UK. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 227(259): 680–685.
   PubMed Web of Science ®Google Scholar
• Leggett JM. 1987. Inter-specific hybrids involving the recently described taxon Avena atlantica. Genome. 29: 361–364.
   Web of Science ®Google Scholar
• Leggett JM. 1992. The conservation and exploration of wild oat species. In: Barr AR, Medd RW, editors. Proceedings of the 4th international oat conference,. Vol 2. Adelaide, (Australia).; p. 19–23.
   Google Scholar
• Leggett JM. 1996. Using and conserving Avena genetic resources. In: Scoles GJ, Rossnagel BG, editors. Proceedings of the Vth international oat conference and VIIth international barley genetic symposium. Saskatoon, Canada: University of Saskatchewan; p. 128–132.
   Google Scholar
• Leggett JM, Markhand GS. 1995. The genomic structure of Avena revealed by GISH. In: Brandham, PE, Bennett MD, editors. Kew chromosome conference IV; London.Kew (UK): HMSO.; p. 133–139.
   Google Scholar
• Leggett JM, Thomas H. 1995. Oat evolution and cytogenetics. In: Welch RW, editor. The oat crop: production and utilization. London: Chapman and Hall press; p. 120–149.
   Google Scholar
• Li WT, Peng YY, Wei YM, Baum BR, Zheng YL. 2009. Relationship among Avena species as revealed by consensus chloroplast simple sequence repeat (ccSSR) markers. Genet Resour Crop Evol. 56: 465–480.
   Web of Science ®Google Scholar
• Loskutov IG. 2008. On evolutionary pathways of Avena species. Genet Resour Crop Evol. 55: 211–220.
   Web of Science ®Google Scholar
• Loskutov IG, Rines HW. 2011. “Avena” wild crop relatives: genomic and breeding resources. In: Kole C, editor. Berlin: Springer Berlin Heidelberg; p. 109–183.
   Google Scholar
• Navinder Saini, Neelu Jain, Sunita Jain, Rajinder KJ. 2004. Assessment of genetic diversity within and among Basmati and non-Basmati rice varieties using AFLP, ISSR and SSR markers. Euphytica. 140: 133–146.
   Web of Science ®Google Scholar
• Nei M, W Li. 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases Analysis of gene diversity in subdivided population. Proce Nat Acad Sci. USA. 76: 5269–5273.
   PubMed Web of Science ®Google Scholar
• Nikoloudakis N, Skaracis G, Katsiotis A. 2008. Evolutionary insights inferred by molecular analysis of the ITS1-5.8S-ITS2 and IGS Avena sp. Sequences. Mol Phylogenet Evol. 46: 102–115.
   PubMed Web of Science ®Google Scholar
• Oliver RE, Obert DEG, Hu JM, Bonman E, O’Leary-Jepsen E, Jackson EW. 2010. Development of oat-based markers from barley and wheat microsatellites. Genome. 6:458–471.
   Google Scholar
• Peng YY, Baum BR, Ren CZ, Jiang QT, Chen GY, Zheng YL, Wei YM. 2010c. The evolution pattern of rDNA ITS in Avena and phylogenetic relationship of the Avena species (Poaceae: Aveneae). Hereditas. 147: 183–204.
   PubMed Web of Science ®Google Scholar
• Peng YY, Wei YM, Baum BR, Jiang QT, Lan XJ, Dai SF, Zheng YL. 2010b. Phylogenetic investigation of Avena diploid species and the maternal genome donor of Avena polyploids. Taxon. 59: 1472–1482.
   Web of Science ®Google Scholar
• Peng YY, Wei YM, Baum BR, Yan ZH, Lan XJ, Dai SF, Zheng YL. 2010a. Phylogenetic inferences in Avena based on analysis of FL intron2 sequences. Theor Appl Genet 121: 985–1000.
   PubMed Web of Science ®Google Scholar
• Peng YY, Wei YM, Baum BR, Zheng YL. 2008. Molecular diversity of the 5S rRNA gene and genomic relationships in the genus Avena (Poaceae: Aveneae). Genome. 51: 137–154.
   PubMed Web of Science ®Google Scholar
• Rajhathy T, Morrison JW. 1959. Chromosome morphology in the genus Avena. Can J Bot. 37: 331–337.
   Google Scholar
• Rajhathy T, Thomas H. 1974. Cytogenetics of oats (Avena L.). Ottawa: Miscellaneous Publication of the Genetics Society of Canada; p. 57–60.
   Google Scholar
• Reif JC, Zhang P, Dreisigacker S, Warburton ML, Van Ginkel M, Hoisington D, Bohn M, Melchinger AE. 2005. Wheat genetic diversity trends during domestication and breeding. Theor Appl Genet. 110(5):859–864.
   PubMed Web of Science ®Google Scholar
• Rohf FJ. 2000. NTSYS-pc. Numerical taxonomy and multivariate analysis system, Version 2.1. Exter Software, Setauket, New York.
   Google Scholar
• Roussel V, Koenig J, Beckert M, Balfourier F. 2004. Molecular diversity in French bread wheat accessions related to temporal trends and breeding programmes. Theor Appl Genet. 108(5):920–930.
   PubMed Web of Science ®Google Scholar
• Shelukhina OY, Badaeva ED, Brezhneva TA, Loskutov IG, Pukhalsky VA. 2008. Comparative analysis of diploid species of Avena L. using cytogenetic and biochemical markers: Avena canariensis Baum et Fedak and A. longiglumis Dur. Russ J Genet. 44(6): 694–701.
   Web of Science ®Google Scholar
• Sihag R, Hooda JS, Vashishtha RD, Malik BPS. 2004. Genetic divergence in soybean [Glycine max (L.) Merrill]. Annals Biol. 20(1): 17–21.
   Google Scholar
• Simons MD, Sadanaga K, Murphy HC. 1959. Inheritance of resistance to strains of diploid and tetraploid species of oats to races of the crown rust fungus. Phytopathology. 49:257–259.
   Web of Science ®Google Scholar
• Warburton ML, Peif JC, Frisch M, Bohn M, Bedoya C, Xia XC, Crossa J, Franco J, Hoisington D, Pixley K, Taba S, Melchinger AE. 2008. Genetic diversity in CIMMYT nontemperate maize germplasm: landraces, open pollinated varieties and inbred lines. Crop Sci. 48(2):617–624.
   Web of Science ®Google Scholar
• Wu B, Zhang ZW, Chen LY, He MG. 2012. Isolation and characterization of novel microsatellite markers for Avena sativa (Poaceae) (Oat). Am J Bot. 99(2): e69–e71.
   PubMed Web of Science ®Google Scholar
• Xiao JH, Grandillo S, Ahn SN, McCouch SR, Tanskey SD, Li JM, Yuan LP. 1996. Genes from wild rice improve yield. Nature. 384: 223–224.
   Web of Science ®Google Scholar
• Yang Q, Hanson L, Bennett MD, Leitch IJ. 1999. Genome structure and evolution in the allohexaploid weed Avena fatua L. (Poaceae). Genome. 42: 512–518.
   PubMed Web of Science ®Google Scholar
• Yüzbaşioğlu E, Açik L, Özcan S. 2008. Seed protein diversity among lentil cutivars. Biol Plantarum. 52(1):126–128.
   Web of Science ®Google Scholar
• Zhai XG, Pan ZF, Shang B, Deng GB, Yu MQ. 2009. Analysis of oats glutenin with SDS polyacrylam ide gel electrophoresis (SDS-PAGE). Southwest China Journal of Agricultural Sciences. 22(1):24–28. Chinese.
   Google Scholar