Phylogeographical history of the white seabream Diplodus sargus (Sparidae): Implications for insularity

References

• Aboim , MA , Menezes , GM , Schlitt , T and Rogers , D . 2005 . Genetic structure and history of populations of the deep-sea fish Helicolenus dactylopterus (Delaroche, 1809) inferred from mtDNA sequence analysis . Molecular Ecology , 14 : 1343 – 54 .
   PubMed Web of Science ®Google Scholar
• Adams , J , Maslin , M and Thomas , E . 1999 . Sudden climate transitions during the Quaternary . Progress in Physic Geography , 23 : 1 – 36 .
   Web of Science ®Google Scholar
• Alhammoud , B , Béranger , K , Mortier , L , Crépon , M and Dekeyser , I . 2004 . Surface circulation of the Levantine Basin: Comparison of model results with observations . Progress in Oceanography , 66 : 299 – 320 .
   Web of Science ®Google Scholar
• Bargelloni , L , Alarcón , JA , Álvarez , MC , Penzo , E , Magoulas , A Palma , J . 2005 . The Atlantic–Mediterranean transition: Discordant genetic patterns in two seabream species, Diplodus puntazzo (Cetti) and Diplodus sargus (L.) . Molecular Phylogentics and Evolution , 36 : 523 – 35 .
   PubMed Web of Science ®Google Scholar
• Bargelloni , L , Alarcón , JA , Álvarez , MC , Penzo , E , Magoulas , A Reis , C . 2003 . Discord in the family Sparidae (Teleostei): Divergent phylogeographical patterns across the Atlantic–Mediterranean divide . Journal of Evolutionary Biology , 16 : 1149 – 58 .
   PubMed Web of Science ®Google Scholar
• Barton , ED , Aristegui , J , Tett , P , Cantón , M , García-Braun , J Hernández-León , S . 1998 . The transition zone of the Canary Current upwelling region . Progress in Oceanography , 41 : 455 – 504 .
   Web of Science ®Google Scholar
• Bauchot ML , Hureau JC 1990 . Sparidae . In : Whitehead PJP , Bauchot ML , Hureau JC , Nielsen J , Tortuese , Fishes of the North-Eastern Atlantic and Mediterranean Paris : UNESCO , p 883 – 907 .
   Google Scholar
• Baus , E , Darrock , DJ and Bruford , MW . 2005 . Gene-flow patterns in Atlantic and Mediterranean populations of the Lusitanian sea star Asterina gibossa . Molecular Ecology , 14 : 3373 – 82 .
   PubMed Web of Science ®Google Scholar
• Belkhir K , Borsa P , Goudet J , Chicki L , Bonhomme F . 1996 – 2004 . GENETIX 4.05, logiciel sous WindowsTM pour la génetique des populations. Laboratoire Génome, Populations, Interactions, CNRS UMR 5000, Université de Montpellier II, Montpellier (France). Computer preogram. Available on http://www.univ-montp2.fr/genetix/genetix/genetix.htm
   Google Scholar
• Briggs , JC. 1974 . Marine Zoogeography , New York, NY : McGraw-Hill Press .
   Google Scholar
• Briggs JC . 1996 . Global Biogeography . Developments in Paleontology and Stratigraphy . Vol. 14 . Amsterdam : Elsevier .
   Google Scholar
• Cardinale , M and Arrhenius , F . 2000 . The influence of stock structure and environmental conditions on the recruitment process of Baltic cod estimated using a generalized additive model . Canadian Journal of Fisheries and Aquatic Science , 57 : 2402 – 09 .
   Web of Science ®Google Scholar
• Comesaña , AS , Martínez-Areal , MT and Sanjuán , A . 2008 . Genetic variation in the mitochondrial DNA control region among horse mackerel (Trachurus trachurus) from the Atlantic and Mediterranean areas . Fisheries Research , 89 : 122 – 31 .
   Web of Science ®Google Scholar
• Costagliola , D , Robertson , DR , Guidetti , P , Stefanni , S , Wirtz , P Heiser , JB . 2004 . Evolution of coral reef fish Thalassoma pavo spp. (Labridae). 2. Evolution of the eastern Atlantic species . Marine Biology , 144 : 377 – 83 .
   Web of Science ®Google Scholar
• Crowley , TJ . 1981 . Temperature and circulation changes in the eastern north Atlantic during the last 150,000 years: Evidence from the planktonic foraminiferal record . Marine Micropaleontology , 6 : 97 – 129 .
   Web of Science ®Google Scholar
• Domingues , V , Santos , R , Brito , A , Alexandrou , M and Almada , V . 2007 . Mitochondrial and nuclear markers reveal isolation by distance and effects of Pleistocene glaciations in the northeastern Atlantic and Mediterranean populations of the white seabream (Diplodus sargus, L.) . Journal of Experimental Marine Biology and Ecology , 346 : 102 – 13 .
   Web of Science ®Google Scholar
• Domingues , V , Santos , R , Brito , A and Almada , V . 2006 . Historical population dynamics and demography of the eastern Atlantic pomacentrid Chromis limbata (Valenciennes, 1833) . Molecular Phylogenetics and Evolution , 40 : 139 – 47 .
   Google Scholar
• Durán , S , Palacín , C , Becerro , MA , Turón , X and Giribert , G . 2004 . Genetic diversity and population structure of the comercially harvested sea urchin Paracentrotus lividus (Echinodermata, Echinoidea) . Molecular Ecology , 13 : 3317 – 28 .
   PubMed Web of Science ®Google Scholar
• Emerson , BC . 2002 . Evolution on oceanic islands: Molecular phylogenetic approaches to understanding pattern and process . Molecular Ecology , 15 : 449 – 58 .
   Web of Science ®Google Scholar
• Figuereido , M , Morato , T , Barreiros , JP , Afonso , P and Santos , R . 2005 . Feeding ecology of the white seabream, Diplodus sargus, and the ballan wrasse, Labrus bergylta, in the Azores . Fisheries Research , 75 : 107 – 19 .
   Web of Science ®Google Scholar
• Fu , YX . 1997 . Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection . Genetics , 147 : 915 – 25 .
   PubMed Web of Science ®Google Scholar
• Gibson , RN . 1994 . Impact of habitat quality and quantity on the recruitment of flatfishes . Netherlands Journal of Sea Research , 32 : 191 – 206 .
   Google Scholar
• González-Wangüemert , M , Cánovas , F , Pérez-Ruzafa , A , Marcos , C and Alexandrino , P . 2010 . Connectivity patterns inferred from the genetic structure of white seabream (Diplodus sargus L.) . Journal of Experimental Marine Biology and Ecology , 383 : 23 – 31 .
   Web of Science ®Google Scholar
• González-Wangüemert , M , Pérez-Ruzafa , Á , Cánovas , F , García-Charton , JA and Marcos , C . 2007 . Temporal genetic variation in populations of Diplodus sargus from the SW Mediterranean . Marine Ecology Progress Series , 334 : 237 – 44 .
   Web of Science ®Google Scholar
• González-Wangüemert , M , Pérez-Ruzafa , A , García-Charton , JA and Marcos , C . 2006 . Genetic differentiation and gene flow of two sparidae subspecies, Diplodus sargus sargus and Diplodus sargus cadenati in Atlantic and south-west Mediterranean populations . Biological Journal of the Linnean Society , 89 : 705 – 18 .
   Web of Science ®Google Scholar
• González-Wangüemert , M , Pérez-Ruzafa , Á , Marcos , C and García-Charton , J . 2004 . Genetic differentiation of Diplodus sargus (Pisces: Sparidae) populations in Southwest Mediterranean . Biological Journal of the Linnean Society , 82 : 249 – 61 .
   Web of Science ®Google Scholar
• Grant , WS and Bowen , BW . 1998 . Shallow population histories in deep evolutionary lineages of marine fishes: Insights from sardines and anchovies and lessons for conservation . Journal of Heredity , 89 : 415 – 26 .
   Web of Science ®Google Scholar
• Guo , SW and Thompson , EA . 1992 . Performing the exact test of Hardy–Weinberg proportion for multiple alleles . Biometrics , 48 : 361 – 72 .
   PubMed Web of Science ®Google Scholar
• Gysels , ES , Hellemans , B , Patarnello , T and Volckaert , FAM . 2004 . Current and historic gene flow of the sandy goby Pomatochistus minutus on the European Continental Shelf and in the Mediterranean Sea . Biological Journal of the Linnean Society , 83 : 561 – 76 .
   Web of Science ®Google Scholar
• Hall , TA . 1999 . BIOEDIT: A user-friendly biological sequence alignment, editor and analysis program for Windows 95/98/NT . Nucleic Acids Symposium Series , 41 : 95 – 98 .
   Google Scholar
• Harmelin-Vivien , ML , Harmelin , JG and Leboulleux , V . 1995 . Microhabitat requirements for settlement of juvenile sparid fishes on Mediterranean rocky shores . Hydrobiologia , 300/301 : 309 – 20 .
   Web of Science ®Google Scholar
• Hudson , RR . 1990 . “ Gene genealogies and the coalescent process ” . In Oxford Surveys in Evolutionary Biology , Edited by: Futuyma , D and Antonovics , J . Vol. 7 , 1 – 44 . New York, NY : Oxford University Press .
   Google Scholar
• Jousson , O , Bartoli , P and Pawlowski , J . 2000 . Cryptic speciation among instestinal parasites (Trematoda: Digenea) infecting sympatric host fishes (Sparidae) . Journal of Evolutionary Biology , 13 : 778 – 85 .
   Web of Science ®Google Scholar
• Kocher , TD , Thomas , WK , Meyer , A , Edwards , SV , Paabo , SF Villablanca , FX . 1989 . Dynamics of mtDNA evolution in animals: amplification and sequencing with conserved primers . Proceedings of the National Academy of Sciences USA , 86 : 6196 – 200 .
   PubMed Web of Science ®Google Scholar
• Lazoski , C , Solé-Cava , AM , Boury-Esnault , N , Klatau , M and Russo , CAM . 2001 . Cryptic speciation in a high gene flow scenario in the oviparous marine sponge Chondrosia reniformis . Marine Biology , 139 : 421 – 29 .
   Google Scholar
• Lemaire , C , Versini , J and Bonhomme , F . 2005 . Maintenance of genetic differentiation across a transition zone in the sea: Discordance between nuclear and cytoplasmatic markers . Journal of Evolutionary Biology , 18 : 70 – 80 .
   PubMed Web of Science ®Google Scholar
• Lenfant , P and Planes , S . 1996 . Genetic differentiation of white sea bream within the Lion's Gulf and the Ligurian Sea (Mediterranean Sea) . Journal of Fish Biology , 49 : 613 – 21 .
   Web of Science ®Google Scholar
• Lenfant , P and Planes , S . 2002 . Temporal genetic changes between cohorts in a natural population of a marine fish, Diplodus sargus . Biological Journal of the Linnean Society , 76 : 9 – 20 .
   Web of Science ®Google Scholar
• Mantel , N . 1967 . The detection of disease clustering and generalized regression approach . Canadian Research , 27 : 209 – 20 .
   PubMed Web of Science ®Google Scholar
• Morato , T , Afonso , P , Lourinho , P , Nash , RDM and Santos , S . 2003 . Reproductive biology and recruitment of the white sea bream in the Azores . Journal of Fish Biology , 63 : 59 – 72 .
   Web of Science ®Google Scholar
• Pajuelo , JG and Lorenzo , JM . 2004 . Basic characteristics of the population dynamic and state of exploitation of Moroccan white seabream Diplodus sargus cadenati (Sparidae) in the Canarian archipelago . Journal of Applied Ichthiology , 20 : 15 – 21 .
   Web of Science ®Google Scholar
• Patarnello , T , Filip , A , Volckaert , MJ and Castilho , R . 2007 . Pillars of Hercules: Is the Atlantic–Mediterranean transition a phylogeographical break? . Molecular Ecology , 16 : 4426 – 44 .
   PubMed Web of Science ®Google Scholar
• Pérez-Ruzafa , Á , González-Wangüemert , M , Lenfant , P , Marcos , C and García-Charton , JA . 2006 . Effects of fishing protection on the genetic structure of fish populations . Biological Conservation , 129 : 244 – 55 .
   Web of Science ®Google Scholar
• Piñera , JA , Blanco , G , Vázquez , E and Sánchez , JA . 2007 . Genetic diversity of blackspot seabream (Pagellus bogaraveo) populations of Spanish Coasts: A preliminary study . Marine Biology , 151 : 2153 – 58 .
   Web of Science ®Google Scholar
• Pitchford , JW , James , A and Briendly , J . 2005 . Quantifying the effects of individual and environmental variability in fish recruitment . Fisheries Oceanography , 14 : 150 – 60 .
   Web of Science ®Google Scholar
• Quignard , JP . 1978 . La Mediterranee, creuset ichthyologique . Bolletino Zoologico (suppl) , 45 : 23 – 36 .
   Google Scholar
• Raymond , M and Rousset , F . 1995 . An exact test for population differentiation . Evolution , 49 : 1280 – 83 .
   PubMed Web of Science ®Google Scholar
• Riginos , C and Nachman , MW . 2001 . Population subdivision in marine environments: The contributions of biogeography, geographical distance and discontinuous habitat to genetic differentiation . Molecular Ecology , 10 : 1439 – 53 .
   PubMed Web of Science ®Google Scholar
• Robinson , AR , Leslie , WG , Theocharis , A and Lascaratos , A . 2001 . “ Ocean circulation currents: Mediterranean Sea Circulation ” . In Encyclopedia of Ocean Sciences , Edited by: Turekian , KK and Thorpe , SA . 1689 – 706 . London : Academic Press .
   Google Scholar
• Rogers , AR and Harpending , H . 1992 . Population growth makes waves in the distribution of pairwise differences . Molecular Biology and Evolution , 9 : 552 – 59 .
   PubMed Web of Science ®Google Scholar
• Rosecchi E 1985 . Ethologie alimentaire des sparidae, Diplodus annularis, Diplodus sargus, Diplodus vulgaris, Pagellus erythrinus, Sparus aurata du Golf du Lion et des étangs palavasiens . Thèse de doctoral, Université des Sciences et Techniques du Languedoc . 281 pages .
   Google Scholar
• Rosecchi , E . 1987 . L'alimentation de Diplodus annularis, Diplodus sargus, Diplodus vulgaris, et Sparus aurata (Pisces, Sparidae) dans le Golfe du Lion et des lagunes littorales . Reveu des Travaux de l Institut des Péches Maritimes , 49 : 125 – 41 .
   Google Scholar
• Rozas , J , Sánchez del Barrio , JC , Messeguer , X and Rozas , R . 2003 . DnaSP, DNA polymorphism analyses by the coalescent and other methods . Bioinformatics , 19 : 2496 – 97 .
   PubMed Web of Science ®Google Scholar
• Sambrook , E , Fritsch , F and Maniatis , T . 1989 . Molecular Cloning , 1659 New York, NY : Cold Spring Harbour Press .
   Google Scholar
• Santos , RS , Hawkins , S , Monteiro , LR , Alves , M and Isidro , EJ . 1995 . Marine research, resources and conservation in the Azores . Aquatic Conservation: Marine and Freshwater Ecology , 5 : 311 – 54 .
   Web of Science ®Google Scholar
• Sá-Pinto , A , Branco , M , Soyanda , D and Alexandrino , P . 2008 . Patterns of colonization, evolution and gene flow in species of the genus Patella in the Macaronesian Islands . Molecular Ecology , 17 : 519 – 32 .
   PubMed Web of Science ®Google Scholar
• Schneider S , Roessli D , Excoffier L 2000 . ARLEQUIN ver 2.000: A software for population genetics data analysis . Genetics and Biometry Laboratory . University of Geneva , Geneva . Computer Program .
   Google Scholar
• Schönhuth , S , Álvarez , Y , Rico , V , González , JA , Santana , JI Gouveia , E . 2005 . Molecular identification and biometric analysis of Macaronesian archipelago stocks of Berix splendens . Fisheries Research , 73 : 299 – 309 .
   Web of Science ®Google Scholar
• Stamatis , C , Triantafyllidis , A , Moutou , K.A and Mamuris , Z. 2004 . Mitochondrial DNA variation in northeast Atlantic and Mediterranean populations of Norway lobster, Nephrops norvegicus . Molecular Ecology , 16 : 1377 – 90 .
   Web of Science ®Google Scholar
• Summerer , M , Hanel , R and Sturmbauer , C . 2001 . Mitochondrial phylogeny and biogeographic affinities of sea bream of the genus Diplodus (Sparidae) . Journal of Fish Biology , 59 : 1639 – 52 .
   Google Scholar
• Tajima , F . 1989 . The effect of change in population size on DNA polymorphisms . Genetics , 123 : 597 – 601 .
   PubMed Web of Science ®Google Scholar
• Turón , X , Tarjuelo , I , Durán , S and Pascual , M . 2003 . Characterising invasion processes with genetic data: An Atlantic clade of Clavelina lepadiformis (Ascidiacea) introduced into Mediterranean harbours . Hydrobiologia , 503 : 29 – 35 .
   Web of Science ®Google Scholar
• Uthicke , S and Benzie , JAH . 2000 . Allozyme electrophoresis indicates high gene flow between populations of Holothuria (Microthele) nobilis (Echinodermata: Holothuroidea) on the Great Barrier Reef . Marine Biology , 137 : 819 – 25 .
   Web of Science ®Google Scholar
• Zardoya , R , Castilho , R , Grande , C , Favre-Krey , L , Caetano , S Marcato , S . 2004 . Differential population structuring of two closely related fish species, the mackerel (Scomber scombrus) and the chub mackerel (Scomber japonicus), in the Mediterranean Sea . Molecular Ecology , 13 : 1785 – 98 .
   PubMed Web of Science ®Google Scholar
• Zulliger , DE , Tanner , S , Ruch , M and Ribi , G . 2009 . Genetic structure of the high dispersal Atlanto-Mediterreanean sea star Astropecten aranciacus revealed by mitochondrial DNA sequences and microsatellite loci . Marine Biology , 156 : 597 – 610 .
   Web of Science ®Google Scholar