179
Views
9
CrossRef citations to date
0
Altmetric
ORIGINAL ARTICLES

Identification and expression analysis of the gene lhcSR associated with adaptation to light and low temperature stress in the green tide forming alga Ulva prolifera

, , , , , , & show all
Pages 746-755 | Received 21 Jun 2011, Accepted 20 Jan 2012, Published online: 31 May 2012

References

  • Alboresi , A , Gerotto , C , Giacometti , GM , Bassi , R and Morosinotto , T. 2010 . Physcomitrella patens mutants affected on heat dissipation clarify the evolution of photoprotection mechanisms upon land colonization . Proceedings of the National Academy of Sciences , 107 : 11128 – 33 .
  • Anwaruzzaman , M , Chin , BL , Li , XP , Lohr , M , Martinez , DA and Niyogi , KK. 2004 . Genomic analysis of mutants affecting xanthophyll biosynthesis and regulation of photosynthetic light harvesting in Chlamydomonas reinhardtii . Photosynthesis Research , 82 : 265 – 76 .
  • Bäck , S , Lehvo , A and Blomster , J. 2000 . Mass occurrence of unattached Enteromorpha intestinalis on the Finnish Baltic Sea coast . Annales Botanici Fennici , 37 : 155 – 61 .
  • Barber , J and Andersson , B. 1992 . Too much of a good thing: Light can be bad for photosynthesis . Trends in Biochemical Sciences , 17 : 61 – 6 .
  • Blomster , JS , Bäck , S , Fewer , DP , Kiirikki , M , Lehvo , A Maggs , CA . 2002 . Novel morphology in Enteromorpha (Ulvophyceae) forming green tide . American Journal of Botany , 89 : 1756 – 63 .
  • Bolam , SG , Fernandes , TF , Read , P and Raffaelli , D. 2000 . Effects of macroalgal mats on intertidal sandflats: An experimental study . Journal of Experimental Marine Biology and Ecology , 249 : 123 – 37 .
  • Bonente , G , Passarini , F , Cazzaniga , S , Mancone , C , Buia , MC Tripodi , M . 2008 . The occurrence of the psbs gene product in Chlamydomonas reinhardtii and in other photosynthetic organisms and its correlation with energy quenching . Photochemistry and Photobiology , 84 : 1359 – 70 .
  • Chenna , R , Sugawara , H , Koike , T , Lopez , R , Gibson , TJ Higgins , DG . 2003 . Multiple sequences alignment with the clustal series of programs . Nucleic Acids Research , 31 : 3497 – 500 .
  • Dong M , Zhang X , Zhuang Z , Zou J , Ye N , Xu D , et al. 2012 . Characterization of the LhcSR gene under light and temperature stress in the green alga Ulva linza . Plant Molecular Biology Reporter 30 10 – 6 .
  • Emanuelsson , O , Nielsen , H and von Heijne , G. 1999 . Chloro P, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites . Protein Science , 8 : 978 – 84 .
  • Eppard , M , Krumbein , WE , von Haeseler , A and Rhiel , E. 2000 . Characterization of fcp4 and fcp12, two additional genes encoding light harvesting proteins of Cyclotella cryptica (Bacillariophyceae) and phylogenetic analysis of this complex gene family . Plant Biology , 2 : 283 – 89 .
  • Fletcher , RL , Cuomo , V and Palomba , I. 1990 . The ‘green tide’ problem, with particular reference to the Venice Lagoon . European Journal of Phycology , 25 : 87
  • Gagne , G and Guertin , M. 1992 . the early genetic response to light in the green unicellular alga Chlamydomonas eugametos grown under light dark cycles involves genes that represent direct responses to light and photosynthesis . Plant Molecular Biology , 18 : 429 – 45 .
  • Genty , B , Briantais , JM and Baker , NR. 1989 . The relationship between the quantum yield of photosynthetic electron transport and quenching of chlorophyll fluorescence . Biochimica et Biophysica Acta , 990 : 87 – 92 .
  • Green , BR and Durnford , DG. 1996 . The chlorophyll–carotenoid proteins of oxygenic photosynthesis . Annual Review of Plant Physiology and Plant Molecular Biology , 47 : 685 – 714 .
  • Green , BR and Parson , WW. 2003 . Light-harvesting antennas in photosynthesis , 544 Boston , MA : Kluwer Academic .
  • Green , BR and Pichersky , E. 1994 . Hypothesis for the evolution of three-helix Chl A/B and Chl A/C light-harvesting antenna proteins from two-helix and four-helix ancestors . Photosynthesis Research , 39 : 149 – 62 .
  • Hayden , HS , Blomster , J , Maggs , CA , Silva , PC , Stanhope , MJ and Waaland , JR. 2003 . Linnaeus was right all along: Ulva and Enteromorpha are not distinct genera . European Journal of Phycology , 38 : 277 – 94 .
  • Horton , P and Ruban , A. 2005 . Molecular design of the photosystem II light-harvesting antenna: Photosynthesis and photoprotection . Journal of Experimental Botany , 56 : 365 – 73 .
  • Huner , NPA , Oquist , G and Sarhan , F. 1998 . Energy balance and acclimation to light and cold . Trends in Plant Science , 3 : 224 – 30 .
  • Im , CS , Zhang , ZD , Shrager , J , Chang , CW and Grossman , AR. 2003 . Analysis of light and CO2 regulation in Chlamydomonas reinhardtii using genome-wide approaches . Photosynthesis Research , 75 : 111 – 25 .
  • Koziol , AG , Borza , T , Ishida , KI , Keeling , P , Lee , RW and Durnford , DG. 2007 . Tracing the evolution of the lightharvesting antennae in chlorophyll a/b-containing organisms . Plant Physiology , 143 : 1802 – 16 .
  • Krogh , A , Larsson , B , von Heijne , G and Sonnhammer , EL. 2001 . Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes . Journal of Molecular Biology , 305 : 567 – 80 .
  • Li , XP , Björkman , O , Shih , C , Grossman , AR , Rosenquist , M Jansson , S . 2000 . A pigment-binding protein essential for regulation of photosynthetic light harvesting . Nature , 403 : 391 – 95 .
  • Li , XP , Gilmore , AM , Caffarri , S , Bassi , R , Golan , T Kramer , D . 2004 . Regulation of photosynthetic light harvesting involves intrathylakoid lumen pH sensing by the PsbS protein . Journal of Biological Chemistry , 279 : 22866 – 74 .
  • Li , Z , Wakao , S , Fischer , BB and Niyogi , KK. 2009 . Sensing and responding to excess light . Annual Review of Plant Biology , 60 : 239 – 60 .
  • Livak , KJ and Schmittgen , TD. 2001 . Analysis of relative gene expression data using real-time quantitative PCR and the 2−ΔΔCTmethod . Methods , 25 : 402 – 08 .
  • Malta , EJ , Draisma , SGA and Kamermans , P. 1999 . Freefloating Ulva in the southwest Netherlands: Species or morphotypes? A morphological, molecular and ecological comparison . European Journal of Phycology , 34 : 443 – 54 .
  • Merchant , SS , Prochnik , SE , Vallon , O , Harris , EH , Karpowicz , SJ Witman , GB . 2007 . The Chlamydomonas genome reveals the evolution of key animal and plant functions . Science , 318 : 245 – 51 .
  • Mock , T , Samanta , MP , Iverson , V , Berthiaume , C , Robison , M Holtermann , K . 2008 . Whole-genome expression profiling of the marine diatom Thalassiosira pseudonana identifies genes involved in silicon bioprocesses . Proceedings of the National Academy of Sciences , 105 : 1579 – 84 .
  • Morand P Merceron M. 2004 . Coastal eutrophication and excessive growth of macroalgae . In: Pandalai SG Recent Research Developments in Environmental Biology . 1 Trivandrum , p 395 – 449 .
  • Moseley , JL , Chang , CW and Grossman , AR. 2006 . Genome-based approaches to understanding phosphorus deprivation responses and PSR1 control in Chlamydomonas reinhardtii . Eukaryotic Cell , 5 : 26 – 44 .
  • Naumann , B , Busch , A , Allmer , J , Ostendorf , E , Zeller , M Kirchhoff , H . 2007 . Comparative quantitative proteomics to investigate the remodeling of bioenergetic pathways under iron deficiency in Chlamydomonas reinhardtii . Proteomics , 7 : 3964 – 79 .
  • Niyogi , KK. 1999 . Photoprotection revisited: Genetic and molecular approaches . Annual Review of Plant Physiology and Plant Molecular Biology , 50 : 333 – 59 .
  • Niyogi , KK. 2000 . Safety valves for photosynthesis . Current Opinion in Plant Biology , 3 : 455 – 60 .
  • Pearson , GA , Hoarau , G , Lago-Leston , A , Coyer , JA , Kube , M Reinhardt , R . 2010 . An expressed sequence tag analysis of the intertidal brown seaweeds Fucus serratus (L.) and F. vesiculosus (L.) (Heterokontophyta, Phaeophyceae) in response to abiotic stressors . Marine Biotechnology , 12 : 195 – 213 .
  • Pedersen , MF and Borum , J. 1997 . Nutrient control of estuarine macroalgae: Growth strategy and the balance between nitrogen requirements and uptake . Marine Ecology Progress Series , 161 : 155 – 63 .
  • Peers , G , Truong , TB , Ostendorf , E , Busch , A , Elrad , D Grossman , AR . 2009 . An ancient light-harvesting protein is critical for the regulation of algal photosynthesis . Nature , 462 : 518 – 22 .
  • Richard , C , Ouellet , H and Guertin , M. 2000 . Characterization of the LI818 polypeptide from the green unicellular alga Chlamydomonas reinhardtii . Plant Molecular Biology , 42 : 303 – 16 .
  • Sandona , D , Croce , R , Pagano , A , Crimi , M and Bassi , R. 1998 . Higher plants light harvesting proteins. Structure and function as revealed by mutation analysis of either protein or chromophore moieties . Biochimica et Biophysica Acta , 1365 : 207 – 14 .
  • Savard , F , Richard , C and Guertin , M. 1996 . The Chlamydomonas reinhardtii LI818 gene represents a distant relative of the cabI/II genes that is regulated during the cell cycle and in response to illumination . Plant Molecular Biology , 32 : 461 – 73 .
  • Schramm , W and Nienhuis , PH. 1996 . “ Introduction ” . In Marine Benthic Vegetation. Recent Changes and the Effects of Eutrophication , Edited by: Schramm , PH, and Nienhuis , PN . 1 – 4 . Heidelberg , Berlin : Springer-Verlag .
  • Shimada , S , Yokoyama , N , Arai , S and Hiraoka , M. 2008 . Phylogeography of the genus Ulva (Ulvophyceae, Chlorophyta), with special reference to the Japanese freshwater and brackish taxa . Journal of Applied Phycology , 20 : 979 – 89 .
  • Tamura , K , Dudley , J , Nei , M and Kumar , S. 2007 . MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0 . Molecular Biology and Evolution , 24 : 1596 – 99 .
  • Taylor , R , Fletcher , RL and Raven , JA. 2001 . Preliminary studies on the growth of selected ‘green tide’ algae in laboratory culture: Effects of irradiance, temperature, salinity and nutrients on growth rate . Botanica Marina , 44 : 327 – 36 .
  • Thompson , JD , Gibson , TJ , Plewniak , F , Jeanmougin , F and Higgins , DG. 1997 . The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools . Nucleic Acids Research , 25 : 4876 – 82 .
  • Tusnády , GE and Simon , I. 2001 . The HMMTOP transmembrane topology prediction server . Bioinformatics , 17 : 849 – 50 .
  • Valiela , I , McClelland , J , Hauxwell , J , Behr , PJ , Hersh , D and Foreman , K. 1997 . Macroalgal blooms in shallow estuaries: controls and ecophysiological and ecosystem consequences . Limnology and Oceanography , 42 : 1105 – 18 .
  • Yamano , T , Miura , K and Fukuzawa , H. 2008 . Expression analysis of genes associated with the induction of the carbon-concentrating mechanism in Chlamydomonas reinhardtii . Plant Physiology , 147 : 340 – 54 .
  • Ye NH , Zhuang ZM , Jin XS , Wang QY , Zhang XW , Li DM , et al. 2008a . China is on the tracking Enteromorpha spp . forming green tide. Available at: http://hdl.handle.net/10101/npre.2008.2352.1 (accessed 1 February 2012) .
  • Zhang , X , Mao , YZ , Zhuang , ZM , Liu , S , Wang , QY and Ye , NH. 2008 . Morphological characteristics and molecular phylogenetic analysis of green tide Enteromorpha sp. occurred in the Yellow Sea . Journal of Fishery Sciences of China , 15 : 822 – 29 .
  • Zhang , X , Wang , H , Mao , Y , Liang , C , Zhuang , Z Wang , Q . 2010 . Somatic cells serve as a potential propagule bank of Enteromorpha prolifera forming a green tide in the Yellow Sea, China . Journal of Applied Phycology , 22 : 173 – 80 .
  • Zhang X , Xu D , Mao Y , Li Y , Xue S , Zou J , et al. 2011 . Settlement of vegetative fragments of Ulva prolifera in settlement confirmed as an important seed source for succession of a large-scale green tide bloom . Limnology and Oceanography 56 ( 1 ) 233 42
  • Zhang , ZD , Shrager , J , Jain , M , Chang , CW , Vallon , O and Grossman , AR. 2004 . Insights into the survival of Chlamydomonas reinhardtii during sulfur starvation based on microarray analysis of gene expression . Eukaryotic Cell , 3 : 1331 – 48 .
  • Zhu , SH and Beverley , RG. 2010 . Photoprotection in the diatom Thalassiosira pseudonana: Role of LI818-like proteins in response to high light stress . Biochimica et Biophysica Acta , 1797 : 1449 – 57 .

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.