References
- Chaouch M. 2021. Loop-mediated isothermal amplification (LAMP): An effective molecular point-of-care technique for the rapid diagnosis of coronavirus SARS-CoV-2. Rev. Med. Virol. e2215. doi:https://doi.org/10.1002/rmv.2215.
- Chen GF, Ma CS, Zhang CY, Zhou J, Wang YY, Wang GC, Zhang BY, Xu Z, Lu DD. 2013. A rapid and sensitive method for field detection of Prorocentrum donghaiense using reverse transcription-coupled loop-mediated isothermal amplification. Harmful Algae. 29:31–39. doi:https://doi.org/10.1016/j.hal.2013.08.001.
- Chen QX, Zhang CY, Liu FG, Ma HY, Wang YY, Chen GF. 2020. Easy detection of karlodinium veneficum using PCR-based dot chromatography strip. Harmful Algae. 99:101908. doi:https://doi.org/10.1016/j.hal.2020.101908.
- Chen XF, Zhou QN, Duan WJ, Zhou CX, Duan LJ, Zhang HL, Sun AL, Yan XJ, Chen J. 2016. Development and evaluation of a DNA microarray assay for the simultaneous detection of nine harmful algal species in ship ballast and seaport waters. Chinese Journal of Oceanology and Limnology. 34:86–101. doi:https://doi.org/10.1007/s00343-015-4265-9.
- Dyhrman ST, Erdner D, La DJ, Galac M, Anderson DM. 2006. Molecular quantification of toxic Alexandrium fundyense in the gulf of maine using real-time PCR. Harmful Algae. 5:242–250. doi:https://doi.org/10.1016/j.hal.2005.07.005.
- Ebenezer V, Medlin LK, Ki J. 2012. Molecular detection, quantification, and diversity evaluation of microalgae. Marine Biotechnology. 14:129–142. doi:https://doi.org/10.1007/s10126-011-9427-y.
- El Wahed, AA, Patel P, Maier M, Pietsch C, Ruster D, Bohlken-Fascher S, Kissenkotter J, Behrmann O, Frimpong M, Diagne MM, et al. 2021. Suitcase lab for rapid detection of sars-cov-2 based on recombinase polymerase amplification assay. Analytical Chemistry. 93:2627–2634. doi:https://doi.org/10.1021/acs.analchem.0c04779.
- Elleuch J, Barkallah M, Smith KF, Ben NI, Fendri I, Abdelkafi S. 2020. Quantitative PCR assay for the simultaneous identification and enumeration of multiple Karenia species. Environmental Science and Pollution Research. 27:36889–36899. doi:https://doi.org/10.1007/s11356-020-09739-4.
- Frimpong M, Kyei-Tuffuor L, Fondjo LA, Ahor HS, Adjei-Kusi P, Maiga-Ascofare O, Phillips RO. 2021. Evaluation of a real-time recombinase polymerase amplification assay for rapid detection of Schistosoma haematobium infection in resource-limited setting. Acta Tropica. 216:105847. doi:https://doi.org/10.1016/j.actatropica.2021.105847.
- Fu MQ, Yang YC, Zhang CY, Chen GF, Wang YY. 2020. Recombinase polymerase amplification combined with lateral-flow dipstick for rapid detection of Prorocentrum minimum. Journal of Applied Phycology. 32:1837–1850. doi:https://doi.org/10.1007/s10811-020-02079-3.
- García-Bernalt Diego J, Fernández-Soto P, Febrer-Sendra B, Crego-Vicente B, Muro A. 2021. Loop-mediated isothermal amplification in schistosomiasis. Journal of Clinical Medicine. 10:511. doi:https://doi.org/10.3390/jcm10030511.
- Gas F, Pinto L, Baus B, Gaufres L, Crassous M, Compere C, Quemeneur E. 2009. Monoclonal antibody against the surface of Alexandrium minutum used in a whole-cell ELISA. Harmful Algae. 8:538–545. doi:https://doi.org/10.1016/j.hal.2008.08.027.
- Guillard RRL. 1975. Culture of phytoplankton for feeding marine inver-tebrates. In: Smith WL, Chanley MH, editor. Culture of marine invertebrate animals. New York: Plenum Press; p. 29–60.
- Houf K, Tutenel A, De Zutter L, Van Hoof J, Vandamme P. 2000. Development of a multiplex PCR assay for the simultaneous detection and identification of Arcobacter butzleri, Arcobacter cryaerophilus and Arcobacter skirrowii. FEMS Microbiology Letters. 193:89–94. doi:https://doi.org/10.1111/j.1574-6968.2000.tb09407.x.
- Hu JQ, Huang RN, Sun YT, Wei XK, Wang Y, Jiang CP, Geng Y, Sun XC, Jing JZ, Gao H, et al. 2019. Sensitive and rapid visual detection of Salmonella Typhimurium in milk based on recombinase polymerase amplification with lateral flow dipsticks. Journal of Microbiological Methods. 158:25–32. doi:https://doi.org/10.1016/j.mimet.2019.01.018.
- Huang HJ, Gan CQ, Xiao SW, Zou C, Balamurugan S, Li H, Liu J, Yang W. 2020. Genetic diversity of Prorocentrum donghaiense population during bloom in the East China Sea revealed by microsatellite. Journal of Applied Phycology. 32:1851–1862. doi:https://doi.org/10.1007/s10811-020-02113-4.
- Hyeon HS, Zhun L, Min HS, Ho YS, Weol AL, Jong WP. 2019. Harmful dinoflagellate Prorocentrum donghaiense lu is widely distributed along the East China Sea and Korean coastal area. Ocean Science Journal. 54:685–691. doi:https://doi.org/10.1007/s12601-019-0028-4.
- Kang J, Jang H, Yeom G, Kim M. 2021. Ultrasensitive detection platform of disease biomarkers based on recombinase polymerase amplification with h-sandwich aptamers. Analytical Chemistry. 93:992–1000. doi:https://doi.org/10.1021/acs.analchem.0c03822.
- Kolm C, Martzy R, Fuehrer M, Mach RL, Krska R, Baumgartner S, Farnleitner AH, Reischer GH. 2019. Detection of a microbial source tracking marker by isothermal helicase-dependent amplification and a nucleic acid lateral-flow strip test. Scientific Reports. 9:1165–1172. doi:https://doi.org/10.1038/s41598-018-36749-7.
- Li CF, Liu Z, Liu CC, Qin C, Feng M, Wang GS, Mi TZ. 2015. Preparation of antibodies and development of an enzymelinked immunosorbent assay for detection of Prorocentrum donghaiense. Mar. Sci. 39:117–124. doi:https://doi.org/10.11759/hykx2014061800.
- Li J, Macdonald J, von Stetten F. 2020a. Review: a comprehensive summary of a decade development of the recombinase polymerase amplification. The Analyst. 145:1950–1960. doi:https://doi.org/10.1039/C9AN90127B.
- Li XM, Zheng T, Gao L, Li F, Hou XD, Wu P. 2020b. Recombinase polymerase amplification: from principle to performance. Chem. J. Chin. Univ-Chin. 41:2587–2597. doi:https://doi.org/10.7503/cjcu20200592.
- Lillis L, Lehman D, Singhal MC, Cantera J, Singleton J, Labarre P, Toyama A, Piepenburg O, Parker M, Wood R, et al. 2014. Non-Instrumented incubation of a recombinase polymerase amplification assay for the rapid and sensitive detection of proviral HIV-1 DNA. PLoS One. 9:e108189. doi:https://doi.org/10.1371/journal.pone.0108189.
- Lin LY, Zheng YZ, Huang HY, Zhuang FL, Chen HX, Zha GC, Yang PK, Wang ZH, Kong ML, Wei HG, et al. 2021. A visual method to detect meat adulteration by recombinase polymerase amplification combined with lateral flow dipstick. Food Chemistry. 354:129526. doi:https://doi.org/10.1016/j.foodchem.2021.129526.
- Liu FG, Zhang CY, Yang YC, Yang YD, Wang YY, Chen GF. 2020a. Detection of Prorocentrum minimum by hyperbranched rolling circle amplification coupled with lateral flow dipstick. Environmental Science and Pollution Research. 27:44995–45007. doi:https://doi.org/10.1007/s11356-020-10391-1.
- Liu R, Wang ZY, Liu XX, Chen AL, Yang SM. 2020b. Rapid on-site detection of Salmonella pullorum based on lateral flow nucleic acid assay combined with recombinase polymerase amplification reaction. Poultry Science. 99:7225–7232. doi:https://doi.org/10.1016/j.psj.2020.10.020.
- Lu DD, Goebel J, Qi YZ, Zou JZ, Han XT, Gao YH, Li YG. 2005. Morphological and genetic study of Prorocentrum donghaiense lu from the East China Sea, and comparison with some related Prorocentrum species. Harmful Algae. 4:493–505. doi:https://doi.org/10.1016/j.hal.2004.08.015.
- Mabrok M, Elayaraja S, Chokmangmeepisarn P, Jaroenram W, Arunrut N, Kiatpathomchai W, Debnath PP, Delamare-Deboutteville J, Mohan CV, Fawzy A, Rodkhum C. 2021. Rapid visualization in the specific detection of flavobacterium columnare, a causative agent of freshwater columnaris using a novel recombinase polymerase amplification (RPA) combined with lateral flow dipstick (LFD) assay. Aquaculture. 531:735780. doi:https://doi.org/10.1016/j.aquaculture.2020.735780.
- Marampouti C, Buma AGJ, Boer MK. 2021. Mediterranean alien harmful algal blooms: origins and impacts. Environmental Science and Pollution Research. 28:3837–3851. doi:https://doi.org/10.1007/s11356-020-10383-1.
- Nagai S. 2011. Development of a multiplex PCR assay for simultaneous detection of six alexandrium species (dinophyceae)1. Journal of Phycology. 47:703–708. doi:https://doi.org/10.1111/j.1529-8817.2011.00976.x.
- Nguyen V, Song S, Park S, Joo C. 2020. Recent advances in high-sensitivity detection methods for paper-based lateral-flow assay. Biosensors and Bioelectronics. 152:112015. doi:https://doi.org/10.1016/j.bios.2020.112015.
- Obande GA, Singh KKB. 2020. Current and future perspectives on isothermal nucleic acid amplification technologies for diagnosing infections. <![CDATA[Infection and Drug Resistance]]>. 13:455–483. doi:https://doi.org/10.2147/IDR.S217571.
- Pang YL, Cong F, Zhang XH, Li HX, Chang YF, Xie QM, Lin WC. 2021. A recombinase polymerase amplification-based assay for rapid detection of chlamydia psittaci. Poultry Science. 100:585–591. doi:https://doi.org/10.1016/j.psj.2020.11.031.
- Patel SS, Lovko VJ, Lockey RF. 2020. Red tide: overview and clinical manifestations. The Journal of Allergy and Clinical Immunology: In Practice. 8:1219–1223. doi:https://doi.org/10.1016/j.jaip.2019.10.030.
- Penna A, Magnani M. 1999. Identification of Alexandrium (dinophyceae) species using PCR and rDNA-targeted probes. Journal of Phycology. 35:615–621. doi:https://doi.org/10.1046/j.1529-8817.1999.3530615.x.
- Piepenburg O, Williams CH, Stemple DL, Armes NA. 2006. DNA detection using recombination proteins. PLoS Biology. 4:e204. doi:https://doi.org/10.1371/journal.pbio.0040204.
- Qin Y, Zhang CY, Liu FG, Chen QX, Yang YC, Wang YY, Chen GF. 2020. Establishment of double probes rolling circle amplification combined with lateral flow dipstick for rapid detection of Chattonella marina. Harmful Algae. 97:101857. doi:https://doi.org/10.1016/j.hal.2020.101857.
- Seltenrich N. 2014. Keeping tabs on HABs: new tools for detecting, monitoring, and preventing harmful algal blooms. Environ. Health Perspect. 122:A206–A213.
- Shelite TR, Bopp NE, Moncayo A, Reynolds ES, Thangamani S, Melby PC, Bloch K, Aguilar PV, Travi BL. 2021. Isothermal recombinase polymerase amplification-lateral flow point-of-care diagnostic test for heartland virus. Vector-Borne and Zoonotic Diseases. 21:110–115. doi:https://doi.org/10.1089/vbz.2020.2670.
- Su J, Meng L, Wei TN, Xu QF, Zou XR, Fei M, Zhang CY. 2021. Aptamer-mediated rolling circle amplification for label-free and sensitive detection of histone acetyltransferase activity. Chemical Communications. 57:2041–2044. doi:https://doi.org/10.1039/D0CC07763A.
- Sun YJ, Chen GF, Zhang CY, Guo CL, Wang YY, Sun R. 2019. Development of a multiplex polymerase chain reaction assay for the parallel detection of harmful algal bloom-forming species distributed along the Chinese coast. Harmful Algae. 84:36–45. doi:https://doi.org/10.1016/j.hal.2019.02.008.
- Toldra A, O'Sullivan CK, Diogene J, Campas M. 2020. Detecting harmful algal blooms with nucleic acid amplification-based biotechnological tools. Science of The Total Environment. 749:141605. doi:https://doi.org/10.1016/j.scitotenv.2020.141605.
- Tyrrell JV, Bergquist PR, Saul DJ, MacKenzie L, Bergquist PL. 1997. Oligonucleotide probe technology as applied to the study of harmful algal blooms. New Zealand Journal of Marine and Freshwater Research. 31:551–560. doi:https://doi.org/10.1080/00288330.1997.9516788.
- Vickers S, Bernier M, Zambrzycki S, Fernandez FM, Newton PN, Caillet C. 2018. Field detection devices for screening the quality of medicines: a systematic review. BMJ Glob. Health. 3:e000725. doi:https://doi.org/10.1136/bmjgh-2018-000725.
- Wang L, Zhang CY, Chen GF, Wang YY, Fu MQ. 2020. Development of a rapid screening test for Karenia mikimotoi by using loop-mediated isothermal amplification and lateral flow dipstick. Journal of Applied Phycology. 32:3143–3155. doi:https://doi.org/10.1007/s10811-020-02203-3.
- Wang R, Zhang F, Wang L, Qian WJ, Qian C, Wu J, Ying YB. 2017. Instant, visual, and instrument-free method for on-site screening of GTS 40-3-2 soybean based on body-heat triggered recombinase polymerase amplification. Analytical Chemistry. 89:4413–4418. doi:https://doi.org/10.1021/acs.analchem.7b00964.
- White, T.J., Bruns, T., Lee, S., Taylor, J., 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics, In PCR Protocols, editors, San Diego: Academic Press, pp. 315–322.
- Xu LL, Duan JX, Chen JM, Ding SJ, Cheng W. 2021. Recent advances in rolling circle amplification-based biosensing strategies-A review. Analytica Chimica Acta. 1148:238187. doi:https://doi.org/10.1016/j.aca.2020.12.062.
- Xu WJ, Tan LJ, Guo X, Wang JT. 2020. Isolation of anti-algal substances from cylindrotheca closterium and their inhibition activity on bloom-forming Prorocentrum donghaiense. Ecotoxicology and Environmental Safety. 190:110180. doi:https://doi.org/10.1016/j.ecoenv.2020.110180.
- Yang Y, Qin XD, Wang GX, Jin JX, Shang YJ, Zhang ZD. 2016. Development of an isothermoal amplification-based assay for rapid visual detection of an Orf virus. Virology Journal. 13:46. doi:https://doi.org/10.1186/s12985-016-0502-x.
- Yang Y, Yang Q, Ma XY, Zhang YZ, Zhang XZ, Zhang W. 2017. A novel developed method based on single primer isothermal amplification for rapid detection of alicyclobacillus acidoterrestris in apple juice. Food Control. 75:187–195. doi:https://doi.org/10.1016/j.foodcont.2016.12.005.
- Zhang BS, Zhu ZN, Li F, Xie XY, Ding AJ. 2021. Rapid and sensitive detection of hepatitis B virus by lateral flow recombinase polymerase amplification assay. Journal of Virological Methods. 291:114094. doi:https://doi.org/10.1016/j.jviromet.2021.114094.
- Zhang CY, Chen GF, Zhou J, Wang YY, Lu DD. 2016. Development of a quantitative PCR for detection and quantification of Prorocentrum donghaiense. Journal of Applied Phycology. 28:1683–1693. doi:https://doi.org/10.1007/s10811-015-0682-6.
- Zhang J, Liu J, An D, Fan YH, Cheng ZQ, Tang Y, Diao YX. 2020. A novel recombinase polymerase amplification assay for rapid detection of epidemic fowl adenovirus. Poultry Science. 99:6446–6453. doi:https://doi.org/10.1016/j.psj.2020.08.021.
- Zhang SF, Yuan CJ, Chen Y, Lin L, Wang DZ. 2019. Transcriptomic response to changing ambient phosphorus in the marine dinoflagellate Prorocentrum donghaiense. Science of The Total Environment. 692:1037–1047. doi:https://doi.org/10.1016/j.scitotenv.2019.07.291.
- Zhou DN, Wang SS, Yang KL, Liu X, Liu W, Guo R, Liang W, Yuan FY, Liu ZW, Gao T, Tian YX. 2021. Rapid and simultaneous detection of Japanese encephalitis virus by real-time nucleic acid sequence-based amplification. Microbial Pathogenesis. 150:104724. doi:https://doi.org/10.1016/j.micpath.2020.104724.
- Zohdi E, Abbaspour M. 2019. Harmful algal blooms (red tide): a review of causes, impacts and approaches to monitoring and prediction. International Journal of Environmental Science and Technology. 16:1789–1806. doi:https://doi.org/10.1007/s13762-018-2108-x.