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Original Articles

A mathematical model for the spread of Strepotococcus pneumoniae with transmission dependent on serotype

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Pages 72-87 | Received 31 Aug 2010, Accepted 23 May 2011, Published online: 24 Jun 2011

References

  • Albrich , W. C. , Baughman , W. , Schmotzer , B. and Farley , M. M. 2007 . Changing characteristics of invasive pneumococcal disease in metropolitan Atlanta, Georgia, after introduction of a 7-valent pneumococcal conjugate vaccine . Clin. Trends Pneumococcal Dis. , 44 : 1569 – 1576 .
  • Beall , B. , McEllistrem , M. C. , Gertz Jr , R. E. , Wedel , S. , Boxrud , D. J. , Gonzalez , A. L. , Medina , M. , Pai , R. , Thompson , T. A. , Harrison , L. H. , McGee , L. , Whitney , C. G. and the Active Bacterial Core SurveillanceTeam . 2006 . Pre- and post- vaccination clonal compositions of invasive pneumococcal serotypes for isolates collected in the United States in 1999, 2001 and 2002 . J. Clin. Microbiol. , 44 : 999 – 1017 .
  • Birkhoff , G. and Rota , G. C. 1982 . Ordinary Differential Equations Ginn, Boston
  • Brueggemann , A. B. , Griffiths , D. T. , Meats , E. , Peto , T. , Crook , D. W. and Spratt , B. G. 2003 . Clonal relationships between invasive and carriage Streptococcus Pneumoniae and serotype and clone-specific differences in invasive disease potential . J. Infect. Diseases , 187 : 1424 – 1432 .
  • Brueggemann , A. B. , Pai , R. , Crook , D. W. and Beall , B. 2007 . Vaccine escape recombinants emerge after pneumococcal vaccination in the United States . PLoS Pathogens , 3 ( 11 ) : 1628 – 1636 .
  • Brugger , S. D. , Hathaway , L. J. and M¨hlemann , K. 2009 . Detection of Streptococcus Pneumoniae strain co-colonization in the nasopharynx . J. Clin. Microbiol. , 47 : 1750 – 1756 .
  • Buckee , C. O. , Jolley , K. A. , Recker , M. , Penman , B. , Kriz , P. , Gupta , S. and Maiden , M. C. 2008 . Role of selection in the emergence of lineages and the evolution of virulence in Neisseria meningitidis . Proc. Natl. Acad. Sci. USA , 105 : 15082 – 15087 .
  • Clarke , S. C. , Scott , K. J. and McChlery , S. M. 2004 . Serotypes and sequence types of pneumococci causing invasive disease in Scotland prior to the introduction of pneumococcal conjugate polysaccharide vaccines . J. Clin. Microbiol. , 42 : 4449 – 4452 .
  • Coffey , T. J. , Dowson , C. G. , Daniels , M. , Zhou , J. , Martin , C. , Spratt , B. G. and Musser , J. M. 1991 . Horizontal transfer of multiple penicillin-binding protein genes, and capsular biosynthetic genes, in natural populations of Streptococcus pneumoniae . Mol. Microbiol. , 5 ( 9 ) : 2255 – 2260 .
  • Coffey , T. J. , Enright , M. C. , Daniels , M. , Morona , J. K. , Morona , R. , Hryniewicz , W. , Paton , J. C. and Spratt , B. G. 1998 . Recombinational exchanges at the capsular polysaccharide biosynthetic locus lead to frequent serotype changes among natural isolates of Streptococcus Pneumoniae . Mol. Microbiol. , 27 : 73 – 83 .
  • Crook , D. W. , Brueggemann , A. B. , Sleeman , K. and Peto , T. E.A. Pneumococcal carriage,in The Pneumococcus . Edited by: Tuomanen , E.I. , Mitchell , T.J. , Morrison , D.A. and Spratt , B.G. ASM Press, Washington, DC, USA, 2004, pp. 136–147
  • Dagan , R. , Melamed , R. , Muallem , M. , Piglansky , L. , Greenberg , D. , Abramson , O. , Mendelman , P. M. , Bohidar , N. and Yagupsky , P. 1996 . Reduction of nasopharyngeal carriage of pneumococci during the second year of life by a heptavalent conjugate pneumococcal vaccine . J. Infect. Dis. , 174 : 1271 – 1278 .
  • Dagan , R. , Givon-Lavi , N. , Zamir , O. , Sikuler-Cohen , M. , Guy , L. , Janco , J. , Yagupsky , P. and Fraser , D. 2002 . Reduction of nasopharyngeal carriage of Streptococcus Pneumoniae after administration of a 9-valent pneumococcal conjugate vaccine to toddlers attending day--care centres . J. Infect. Dis. , 185 : 927 – 936 .
  • Diekmann , O. and Heesterbeek , J. A.P. 2000 . Mathematical Epidemiology of Infectious Diseases: Model Building, Analysis and Interpretation , Wiley : West Sussex .
  • Enright , M. C. and Spratt , B. G. 1198 . A multilocus sequence typing scheme for Streptococcus Pneumoniae: identification of clones associated with serious invasive disease . Microbiology , 144 : 3049 – 3060 .
  • George , A. C. and Melegaro , A. 2001 . Invasive pneumococcal infection in England and Wales 1999 . Comm. Dis. Rep. Weekly , 11 : 465 – 468 .
  • Gratten , M. , Montgomery , J. , Gerega , G. , Gratten , H. , Siwi , H. , Poli , A. and Koki , G. 1999 . Multiple colonization of the upper respiratory tract of Papua New Guinea children with Haemophilus influenzae and Streptococcus pneumoniae . Southeast Asian J. Trop. Med. Publ. Health , 20 : 501 – 509 .
  • Gray , B. M. , Converse , G. M. 3rd and Dillon Jr. , H. C. 1980 . Epidemiologic studies of Streptococcus Pneumoniae in infants: acquisition, carriage and infection during the first 24 months of life . J. Infect. Dis. , 142 : 923 – 933 .
  • Hodges , R. G. , MacLeod , C. M. and Bernhard , W. G. 1946 . Epidemic pneumococcal pneumonia III, Carrier studies . Am. J. Hygiene , 44 : 207 – 230 .
  • Huang , S. , Platt , R. , Rifas-Shiman , S. , Pelton , S. , Goldmann , D. and Finkelstein , J. 2005 . Post-PCV7 changes in colonizing pneumococcal serotypes in 16 Massachusetts communities, 2001 and 2004 . Pediatrics , 116 : 408 – 413 .
  • Huang , S. S. , Finkelstein , J. A. and Lipsitch , M. 2005 . Modeling community and individual-level effects of child-care center attendance on pneumococcal carriage . Clin. Infect. Dis. , 40 : 1215 – 1222 .
  • Jeffries , J. M.C. , Smith , A. , Clarke , S. C. , Dowson , C. and Mitchell , T. J. 2004 . Genetic analysis of diverse disease-causing pneumococci indicates high levels of diversity within serotypes and capsule switching . J. Clin. Microbiol. , 42 : 5681 – 5688 .
  • Klugman , K. P. 2001 . Efficacy of pneumococcal conjugate vaccines and their effect on carriage and antimicrobial resistance . Lancet Infect. Dis. , 1 ( 2 ) : 85 – 91 .
  • Lamb , K. E. Modelling Genetic Effects in the Transmission of Pneumococcal Carriage, Unpublished Ph.D. Thesis, University of Strathclyde, Glasgow, 2010 .
  • Lamb , K. , Greenhalgh , D. and Robertson , C. 2011 . A simple mathematical model for genetic effects in pneumococcal carriage and transmission . J. Comput. Appl. Math. , 235 : 1812 – 1818 .
  • Lindberg , A. A. 1999 . Glycoprotein conjugate vaccines . Vaccine , 17 : S28 – S32 .
  • Lipsitch , M. 1997 . Vaccination against colonizing bacteria with multiple serotypes . Proc. Natl. Acad. Sci. USA , 94 : 6571 – 6576 .
  • Lipsitch , M. 1999 . Bacterial vaccines and serotype replacement: lessons from Haemophilus Influenzae and prospects for Streptococcus Pneumoniae . Emerg. Infect. Dis. , 5 : 336 – 345 .
  • Lipsitch , M. , Colijn , C. , Cohen , T. , Hanage , W. P. and Fraser , C. 2009 . No coexistence for free: neutral null models for multistrain pathogens . Epidemics , 1 : 2 – 13 .
  • Mbelle , N. , Huebner , R. , Wasas , A. , Kimura , A. , Chang , I. and Klugman , K. 1999 . Immunogenicity and impact on nasopharyngeal carriage of a nonavalent pneumococcal conjugate vaccine . J. Infect. Dis. , 180 : 1171 – 1176 .
  • Scotland , NHS . Pneumococcal vaccine for people aged 65 and over . Available at http://www.scotland.gov.uk/Publications/2003/09/18142/26154,(2003)
  • Nold , A. 1980 . Heterogeneity in disease transmission modeling . Math. Biosci. , 52 : 227 – 240 .
  • Obaro , S. K. , Adegbola , R. A. , Banya , W. A.S. and Greenwood , B. M. 1996 . Carriage of pneumococci after pneumococcal vaccination . The Lancet , 348 : 271 – 272 .
  • Park , S. Y. , Moore , M. R. , Bruden , D. L. , Hyde , T. B. , Reasonover , A. L. , Harker-Jones , M. , Rudolph , K. M. , Hurlburt , D. A. , Parks , D. J. , Parkinson , A. J. , Schuchat , A. and Hennessy , T. W. 2008 . Impact of conjugate vaccine on transmission of antimicrobial-resistant Streptococcus pneumoniae among Alaskan children . Pediatr. Infect. Dis. J. , 27 ( 4 ) : 335 – 340 .
  • Riley , I. D. , Everingham , F. A. , Smith , D. E. and Douglas , R. M. 1981 . Immunisation with a polyvalent pneumococcal vaccine. Effect on respiratory mortality in children living in the New Guinea Highlands . Arch. Dis. Childhood , 56 : 354 – 357 .
  • Salisbury , D. , Ramsay , M. and Noakes , K. 2006 . Immunisation Against Infectious Disease—“The Green Book”' , Norwich , , UK : Department of Health .
  • Singleton , R. J. , Hennessy , T. W. , Bulkow , L. R. , Hammitt , L. L. , Zulz , T. , Hurlburt , D. A. , Butler , J. C. , Rudolph , K. and Parkinson , A. 2007 . Invasive pneumococcal disease caused by nonvaccine serotypes among Alaskan native children with high levels of 7-valent pneumococcal conjugate vaccine coverage . J. Am. Med. Assoc. , 297 ( 16 ) : 1784 – 1792 .
  • Spratt , B. G. and Greenwood , B. M. 2000 . Prevention of pneumococcal disease by vaccination: Does serotype replacement matter? . The Lancet , 356 : 1210 – 1211 .
  • Sutton , K. L. , Banks , H. T. and Castillo-Ch\'avez , C. 2008 . Estimation of pneumococcal disease dynamics parameters and the impact of conjugate vaccination in Australia . Math. Biosci. Eng. , 5 : 175 – 204 .
  • Temime , L. , Guillemot , D. and B\"oelle , P. Y. 2004 . Short and long-term effects of pneumococcal conjugate vaccine of children on penicillin resistance . Antimicrob. Agents Chemo. , 48 : 2206 – 2213 .
  • Temime , L. , B\"oelle , P.-Y. , Opatowski , L. and Guillemot , D. 2008 . Impact of capsular switch on invasive pneumococcal disease incidence in a vaccinated population . PLoS ONE , 3 : e3244
  • Vestrheim , D. F. , Hoiby , E. A. , Aaberge , I. S. and Caugant , D. A. 2010 . Impact of a pneumococcal conjugate vaccine program on carriage among children in Norway . Clin. Vaccine Immunol. , 17 : 325 – 334 .
  • Whitney , C. G. , Pilishvili , T. , Farley , M. M. , Schaffner , W. , Craig , A. S. , Lynfield , R. , Nyquist , A. , Gershman , K. A. , Vazquez , M. , Bennett , N. M. , Reingold , A. , Thomas , A. , Glode , M. P. , Zell , E. R. , Jorgensen , J. H. , Beall , B. and Schuchat , A. 2006 . Effectiveness of seven-valent pneumococcal conjugate vaccine against invasive pneumococcal disease: a matched case-control study . The Lancet , 368 : 1495 – 1502 .
  • Yeh , S. H. , Zangwill , K. M. , Lee , H. , Chang , S.-J. , Wong , V. I. , Greenberg , D. P. and Ward , J. I. 2003 . Heptavalent pneumococcal conjugate vaccine conjugated to outer membrane protein of Neisseria meningitidis serogroup B and nasopharyngeal carriage of Streptococcus Pneumoniae in infants . Vaccine , 21 : 2627 – 2631 .