1,052
Views
37
CrossRef citations to date
0
Altmetric
Technical Report

Detection of a new 20-bp insertion/deletion (indel) within sheep PRND gene using mathematical expectation (ME) method

, , , , , , , , & show all
Pages 143-150 | Received 20 Jan 2017, Accepted 23 Feb 2017, Published online: 12 Apr 2017

REFERENCES

  • Mesquita P, Batista M, Marques MR, Santos IC, Pimenta J, Silva Pereira M, Carolino I, Santos Silva F, Oliveira Sousa MC, Gama LT, et al. Prion-liked Doppel gene polymorphisms and scrapie susceptibility in portuguese sheep breeds. Anim Genet 2010; 41(3):311-4; PMID:19968641; http://dx.doi.org/10.1111/j.1365-2052.2009.01992.x
  • Kocer A, Gallozzi M, Renault L, Tilly G, Pinheiro I, Le Provost F, Pailhoux E, Vilotte JL. Goat PRND expression pattern suggests its involvement in early sex differentiation. Dev Dyn 2007; 236:836-42; PMID:17226816; http://dx.doi.org/10.1002/dvdy.21066
  • Pereira RM, Mesquita P, Batista M, Baptista MC, Barbas JP, Pimenta J, Santos IC, Marques MR, Vasques MI, Silva Pereira M, et al. Doppel gene polymorphisms in Portuguese sheep breeds: Insights on ram fertility. Anim Reprod Sci 2009; 114:157-66; PMID:19028030; http://dx.doi.org/10.1016/j.anireprosci.2008.10.003
  • Allais-Bonnet A, Castille J, Pannetier M, Passet B, Elzaïat M, André M, Montazer-Torbati F, Moazami-Goudarzi K, Vilotte JL, Pailhoux E. A specific role for PRND in goat foetal Leydig cells is suggested by prion family gene expression during gonad development in goats and mice. FEBS Open Bio 2016; 6(1):4-15; PMID:27047737; http://dx.doi.org/10.1002/2211-5463.12002
  • Yang Q, Zhang SH, Liu LL, Cao XK, Lei CZ, Qi XL, Lin FP, Qu WD, Qi XS, Liu JM, et al. Application of mathematical expectation (ME) strategy for detecting low frequency mutations: An example for evaluating 14 bp insertion/deletion (indel) within the bovine PRNP gene. Prion 2016; 10:409-19; PMID:27580010; http://dx.doi.org/10.1080/19336896.2016.1211593
  • Jia WC, Wu XF, Li XC, Xia T, Lei CZ, Chen H, Pan CY, Lan XY. Novel genetic variants associated with mRNA expression of signal transducer and activator of transcription 3 (STAT3) gene significantly affected goat growth traits. Small Ruminant Res 2015; 129:25-36; http://dx.doi.org/10.1016/j.smallrumres.2015.05.014
  • Lan XY, Zhao HY, Li ZJ, Zhou R, Pan CY, Lei CZ, Chen H. Exploring the novel genetic variant of PITX1 gene and its effect on milk performance in dairy goats. J Integr Agr 2013; 12(1):118-26; http://dx.doi.org/10.1016/S2095-3119(13)60212-9
  • Lan XY, Pan CY, Chen H, Zhang CL, Li JY, Zhao M, Lei CZ, Zhang AL, Zhang LZ. An AluI PCR-RFLP detecting a silent allele at the goat POU1F1 locus and its association with production traits. Small Ruminant Res 2007; 73(1):8-12; http://dx.doi.org/10.1016/j.smallrumres.2006.10.009
  • Zhang SH, Sun K, Bian YN, Zhao Q, Wang Z, Ji CN, Li CT. Developmental validation of an X-Insertion/Deletion polymorphism panel and application in HAN population of China. Sci Rep 2015; 5:18336; PMID:26655948; http://dx.doi.org/10.1038/srep18336
  • Zhang XY, Wu XF, Jia WC, Pan CY, Li XC, Lei CZ, Chen H, Lan XY. Novel nucleotide variations, haplotypes structure and associations with growth related traits of goat at Motif-Binding factor (ATBF1) gene. Asian-Australas J Anim Sci 2015; 28(10):1394-406; PMID:26323396; http://dx.doi.org/10.5713/ajas.14.0860
  • Czarnik U, Grzybowski G, Zabolewicz T, Strychalski J, Kaminski S. Deletion/insertion polymorphism of the prion protein gene (PRNP) in Polish red cattle, Polish White-backed cattle and European bison (Bison bonasus L., 1758). Genetika 2009; 45(4):519-525; PMID:19507705
  • Pan CY, Wu CY, Jia WC, Xu Y, Hu SR, Lei CZ, Lan XY, Chen H. A critical functional missense mutation (H173R) in the bovine PROP1 gene significantly affects growth traits in cattle. Gene 2013; 531(2):398-402; PMID:24029076; http://dx.doi.org/10.1016/j.gene.2013.09.002
  • Li Y, Wang K, Jiang YZ, Dai CF, Zou QY, Zheng J. 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) inhibits human ovarian cancer cell proliferation. Cell Oncol (Dordr) 2014; 37(6):429-37; PMID:25404385; http://dx.doi.org/10.1007/s13402-014-0206-4
  • Lan XY, Zhao HY, Li ZJ, Li AM, Lei CZ, Chen H, Pan CY. A novel 28-bp insertion-deletion polymorphism within goat PRNP gene and its association with production traits in Chinese native breeds. Genome 2012; 55(7):547-52; PMID:22794197; http://dx.doi.org/10.1139/g2012-040
  • Hou JX, An XP, Song YX, Gao TY, Lei YN, Cao BY. Two mutations in the caprine MTHFR 3′ UTR regulated by microRNAs are associated with milk production traits. PLoS One 2015; 10(7):e0133015; PMID:26186555; http://dx.doi.org/10.1371/journal.pone.0133015
  • Teves ME, Sundaresan G, Cohen DJ, Hyzy SL, Kajan I, Maczis M, Zhang Z, Costanzo RM, Zweit J, Schwartz Z, et al. Spag17 deficiency results in skeletal malformations and bone abnormalities. PLoS One 2015; 10(5):e0125936; PMID:26017218; http://dx.doi.org/10.1371/journal.pone.0125936
  • Papasavva-Stylianou P, Kleanthous M, Toumazos P, Mavrikiou P, Loucaides P. Novel polymorphisms at codons 146 and 151 in the prion protein gene of Cyprus goats, and their association with natural scrapie. Vet J 2007; 173(2):459-62; http://dx.doi.org/10.1016/j.tvjl.2005.09.013
  • González L, Martin S, Hawkins SA, Goldmann W, Jeffrey M, Sisó S. Pathogenesis of natural goat scrapie: modulation by host PRNP genotype and effect of co-existent conditions. Vet Res 2010; 41(4):48; PMID:20374697; http://dx.doi.org/10.1051/vetres/2010020
  • Guan F, Pan L, Li J, Tang H, Zhu C, Shi G. Polymorphisms of the prion protein gene and their effects on litter size and risk evaluation for scrapie in Chinese Hu sheep. Virus Genes 2011; 43(1):147-52; PMID:21556743; http://dx.doi.org/10.1007/s11262-011-0609-5
  • Goldmann W, Ryan K, Stewart P, Parnham D, Xicohtencatl R, Fernandez N, Saunders G, Windl O, González Bossers A, et al. Caprine prion gene polymorphisms are associated with decreased incidence of classical scrapie in goat herds in the United Kingdom. Vet Res 2011; 42(1):110; PMID:22040234; http://dx.doi.org/10.1186/1297-9716-42-110
  • Mesquita P, Garcia V, Marques MR, Santos Silva F, Oliveira Sousa MC, Carolino I, Pimenta J, Fontes CM, Horta AE, Prates JA, et al. The prion-related protein (testis-specific) gene (PRNT) is highly polymorphic in Portuguese sheep. Anim Genet 2016; 47(1):128-32; PMID:26538093; http://dx.doi.org/10.1111/age.12380

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.