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Articles

Molecular characterization and gene expression analysis of a metalloprotease from Pacific abalone Haliotis discus hannai

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Pages 267-274 | Received 21 Apr 2014, Accepted 10 Jul 2014, Published online: 19 Aug 2014

References

  • Chambers AF, Matrisian LM. 1997. Changing views of the role of matrix metalloproteases. J Natl Cancer Inst. 89:1260–1270.10.1093/jnci/89.17.1260
  • Coleman JE. 1998. Zinc enzymes. Curr Opin Chem Biol. 2:222–234.10.1016/S1367-5931(98)80064-1
  • Eckhard U, Schönauer E, Ducka P, Briza P, Nüss D, Brandstetter H. 2009. Biochemical characterization of the catalytic domains of three different Clostridial collagenases. Biol Chem. 390:11–18.10.1515/BC.2009.004
  • Hooper NM. 1994. Families of zinc metalloproteases. FEBS Lett. 354:1–6.10.1016/0014-5793(94)01079-X
  • Imperiali B, O'Connor SE. 1999. Effect of N-linked glycosylation on glycopeptide and glycoprotein structure. Curr Opin Chem Biol. 3:643–649.10.1016/S1367-5931(99)00021-6
  • Ishida N, Yamashita M, Koizumi N, Terayama M, Ineno T, Minami T. 2003. Inhibition of post-mortem muscle softening following in situ perfusion of protease inhibitors in tilapia. Fish Sci. 69:632–638.10.1046/j.1444-2906.2003.00666.x
  • Kamaishi T, Miwa S, Goto E, Matsuyama T, Oseko N. 2010. Mass mortality of giant abalone Haliotis gigantea caused by a Francisella sp. bacterium. Dis Aquat Organ. 89:145–154.10.3354/dao02188
  • Kinoshita M, Yabe T, Kubota M, Takeuchi K, Kubota S, Toyohara H, Sakaguchi M. 2002. cDNA cloning and characterization of two gelatinases from Japanese flounder. Fish Sci. 68:618–626.10.1046/j.1444-2906.2002.00469.x
  • Kiyama R, Tamura Y, Watanabe F, Tsuzuki H, Ohtani M, Yodo M. 1999. Homology modeling of gelatinase catalytic domains and docking simulations of novel sulfonamide inhibitors. Med Chem. 42:1723–1738.10.1021/jm980514x
  • Kumar S, Tamura K, Jakobsen IB, Nei M. 2001. MEGA2: molecular evolutionary genetics analysis software. Bioinformatics. 12:1244–1245.10.1093/bioinformatics/17.12.1244
  • Lødemel JB, Mæhre HK, Winberg J-O, Olsen RL. 2004. Tissue distribution, inhibition and activation of gelatinolytic activities in Atlantic cod (Gadus morhua). Comp Biochem Physiol B Biochem Mol Biol. 137:363–371.10.1016/j.cbpc.2003.12.007
  • Marchler-Bauer A, Zheng C, Chitsaz F, Derbyshire MK, Geer LY, Geer RC, Gonzales NR, Gwadz M, Hurwitz DI, Lanczycki CJ, et al. 2013. CDD: conserved domains and protein three-dimensional structure. Nucleic Acids Res. 41:348–352.10.1093/nar/gks1243
  • Massova I, Kotra LP, Fridman R, Mobashery S. 1998. Matrix metalloproteinases: structures, evolution, and diversification. FASEB J. 12:1075–1095.
  • Mateos HT, Lewandowski PA, Su XQ. 2012. The effect of replacing dietary fish oil with canola oil on fatty acid composition and expression of desaturase and elongase genes in Jade Tiger hybride abalone. Food Chem. 131:1217–1222.10.1016/j.foodchem.2011.09.107
  • Matrisian LM. 1990. Metalloproteinases and their inhibitors in matrix remodeling. Trends Genet. 6:121–125.10.1016/0168-9525(90)90126-Q
  • Matrisian LM. 1992. The matrix-degrading metalloproteinases. Bioassays. 14:455–463.10.1002/bies.950140705
  • Millichip MI, Dallas DJ, Wu E, Dale S, McKie N. 1998. The metallo-disintegrin ADAM10 (MADM) from bovine kidney has type IV collagenase activity in vitro. Biochem Biophys Res Commun. 245:594–598.10.1006/bbrc.1998.8485
  • Nagas H, Woessner Jr JF. 1999. Matrix metalloproteases. J Biol Chem. 274:21491–21494.10.1074/jbc.274.31.21491
  • Nam BH, Park EM, Kim YO, Kong HJ, Kim WJ, Kang JH, Ji YJ, Lee SJ, Choi TJ. 2009. Identification of two differentially expressed forms of progranulin mRNA in the teleost fish Paralichthys olivaceus. Fish Shellfish Immunol. 26:177–182.10.1016/j.fsi.2008.09.009
  • Park EM, Nam BH, Kim YO, Kong HJ, Kim WJ, Lee SJ, Kong IS, Choi TJ. 2007. EST-based survey of gene expression in seven tissue types from the abalone Haliotis discus hannai. J Fish Sci Technol. 10:119–126.
  • Qian ZJ, Kim SA, Lee JS, Kim HJ, Choi IW, Jung WK. 2012. Antioxidant and anti-inflammatory effects of abalone intestine digest, Haliotis discus hannai in RAW 264.7 macrophages. Biotechnol Bioprocess Eng. 17:475–484.10.1007/s12257-011-0544-2
  • Ramos OHP, Selistre-de-Araujo HS. 2001. Identification of metalloprotease gene families in sugarcane. Genet Mol Biol. 24:285–290.10.1590/S1415-47572001000100037
  • Rawlings ND, Barrett AJ. 1995. Evolutionary families of metallopeptidases. Meth Enzymol. 248:183–228.
  • Roghani M, Becherer JD, Moss ML, Atherton RE, Erdjument-Bromage H, Arribas J, Blackburn RK, Weskamp G, Tempst P, Blobel CP. 1999. Metalloprotease-disintegrin MDC9: intracellular maturation and catalytic activity. J Biol Chem. 274:3531–3540.10.1074/jbc.274.6.3531
  • Rosendahl MS, Ko SC, Long DL, Brewer MT, Rosenzweig B, Hedl E, Anderson L, Pyle SM, Moreland J, Meyers MA, et al. 1997. Identification and characterization of a pro-tumor necrosis factor-processing enzyme from the ADAM family of zinc metalloproteases. J Biol Chem. 272:24588–24593.10.1074/jbc.272.39.24588
  • Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol. 4:406–425.
  • Simakov O, Ferdinand Marletaz F, Cho SJ, Edsinger-Gonzales E, Havlak P, Hellsten U, Kuo DH, Larsson T, Lv J, Arendt D, et al. 2013. Insights into bilaterian evolution from three spiralian genomes. Nature. 493:526–531.10.1038/nature11696
  • Stöcker W, Bode W. 1995. Structural features of a superfamily of zinc-endopeptidases: the metzincins. Curr Op Struct Biol. 5:383–390.10.1016/0959-440X(95)80101-4
  • Thompson JD, Higgins DG, Gibson TJ. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acid Res. 22:4673–4680.10.1093/nar/22.22.4673
  • Tsukamoto H, Yokoyama Y, Suzuki T, Mizuta S, Yoshinaka R. 2007. Molecular cloning and expression of gelatinases (MMP-2 and MMP-9) in the pufferfish Takifugu rubripes. Comp Biochem Physiol B Biochem Mol Biol. 148:295–302.10.1016/j.cbpb.2007.06.007
  • Vincent B, Paitel E, Saftig P, Frobert Y, Hartmann D, De Strooper B, Grassi J, Lopez-Perez E, Checler F. 2001. The disintegrins ADAM10 and TACE contribute to the constitutive and phorbol ester-regulated normal cleavage of the cellular prion protein. J Biol Chem. 276:37743–37746.10.1074/jbc.M003965200
  • Visse R, Nagase H. 2003. Matrix metalloproteinases and tissue inhibitors of metalloproteinases: structure, function, and biochemistry. Circ Res. 92:827–839.10.1161/01.RES.0000070112.80711.3D
  • Woessner Jr JF. 1991. Matrix metalloproteases and their inhibitors in connective tissue remodeling. FASEB J. 5:2145–2154.
  • Xu XY, Shen YB, Fu JJ, Liu F, Guo SZ, Yang XM, Li JL. 2012. Matrix metalloproteinase 2 of grass carp Ctenopharyngodon idella (CiMMP2) is involved in the immune response against bacterial infection. Fish Shellfish Immunol. 33:251–257.10.1016/j.fsi.2012.05.015

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