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Short Communication

A novel community driven software for functional enrichment analysis of extracellular vesicles data

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Article: 1321455 | Received 22 Feb 2017, Published online: 26 May 2017

References

  • Zhang B, Wang J, Wang X, et al. Proteogenomic characterization of human colon and rectal cancer. Nature. 2014;513:1–4.
  • Gerstein MB, Rozowsky J, Yan -K-K, et al. Comparative analysis of the transcriptome across distant species. Nature. 2014;512:445–448.
  • Bailey P, Chang DK, Nones K, et al. Genomic analyses identify molecular subtypes of pancreatic cancer. Nature. 2016;531:47–52.
  • Muir P, Li S, Lou S, et al. The real cost of sequencing: scaling computation to keep pace with data generation. Genome Biol. 2016;17:53.
  • Subramanian A, Tamayo P, Mootha VK, et al. Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci USA. 2005;102:15545–15550.
  • Benito-Martin A, Peinado H. FunRich proteomics software analysis, let the fun begin! Proteomics. 2015;15:2555–2556.
  • Pathan M, Keerthikumar S, Ang C-S, et al. FunRich: an open access standalone functional enrichment and interaction network analysis tool. Proteomics. 2015;15:2597–2601.
  • Wadi L, Meyer M, Weiser J, et al. Impact of outdated gene annotations on pathway enrichment analysis. Nat Methods. 2016;13:705–706.
  • Kalra H, Simpson RJ, Hong J, et al. Vesiclepedia: a compendium for extracellular vesicles with continuous community annotation. PLoS Biol. 2012;10:e1001450.