Role of sigma factor RpoS in Cronobacter sakazakii environmental stress tolerance

References

• Iversen C, Lehner A, Mullane N, et al. Identification of “Cronobacter” spp. (Enterobacter sakazakii). J Clin Microbiol. 2007;45(11):3814–3816.
   PubMed Web of Science ®Google Scholar
• Stephan R, Grim CJ, Gopinath GR, et al. Re-examination of the taxonomic status of Enterobacter helveticus, Enterobacter pulveris and Enterobacter turicensis as members of the genus Cronobacter and their reclassification in the genera Franconibacter gen. nov. and Siccibacter gen. nov. as Franconibacter helveticus comb. nov. Franconibacter pulveris comb. nov. and Siccibacter turicensis comb. nov., respectively. Int J Syst Evol Microbiol. 2014;64(Pt10):3402–3410.
   PubMedGoogle Scholar
• Álvarez-Ordóñez A, Begley M, Hill C. Polymorphisms in rpoS and stress tolerance heterogeneity in natural isolates of Cronobacter sakazakii. Appl Environ Microbiol. 2012;78(11):3975–3984.
   PubMed Web of Science ®Google Scholar
• Kucerova E, Clifton SW, Xia XQ, et al. Genome sequence of Cronobacter sakazakii BAA-894 and comparative genomic hybridization analysis with other Cronobacter species. PLoS One. 2010;5(3):e9556. Published 2010 Mar 8.
   PubMed Web of Science ®Google Scholar
• Feeney A, Kropp KA, O’Connor R, et al. Cronobacter sakazakii: stress survival and virulence potential in an opportunistic foodborne pathogen. Gut Microbes. 2014;5:711–718.
   PubMed Web of Science ®Google Scholar
• Forsythe SJ. Updates on the Cronobacter Genus. Annu Rev Food Sci Technol. 2017;9:2.1–2.22.
   PubMed Web of Science ®Google Scholar
• Hunter CJ, Petrosyan M, Ford HR, et al. Enterobacter sakazakii: an emerging pathogen in infants and neonates. Surg Infect (Larchmt). 2008;9:533–539.
   PubMed Web of Science ®Google Scholar
• Lai K. Enterobacter sakazakii infections among neonates, infants, children, and adults: case reports and a review of the literature. Medicine (Baltimore). 2001;80(2):113–122.
   PubMed Web of Science ®Google Scholar
• Bowen A, Braden C. Invasive Enterobacter sakazakii disease in infants. Emerg Infect Dis. 2006;12:1185–1189.
   PubMed Web of Science ®Google Scholar
• Shaker R, Osaili T, Al-Omary W, et al. Isolation of Enterobacter sakazakii and other Enterobacter spp. from food and food production environments. Food Cont. 2007;18:1241–1245.
   Web of Science ®Google Scholar
• Cheville AM, Arnold KW, Buchrieser C, et al. rpoS regulation of acid, heat, and salt tolerance in Escherichia coli O157:H7. Appl Environ Microbiol. 1996;62(5):1822–1824.
   PubMed Web of Science ®Google Scholar
• Stephan L, Paolo L. SigmaS-dependent gene expression at the onset of stationary phase in Escherichia coli: function of sigmaS-dependent genes and identification of their promoter sequences. J Bacteriol. 2004;186:7186–7195.
   PubMed Web of Science ®Google Scholar
• Castanie-Cornet MP, Penfound TA, Smith D, et al. Control of acid resistance in Escherichia coli. J Bacteriol. 1999;181:3525–3535.
   PubMed Web of Science ®Google Scholar
• Laaberki MH, Janabi N, Oswald E, et al. Concert of regulators to switch on LEE expression in enterohemorrhagic Escherichia coli O157: H7:interplay between Ler, GrlA, HNS and RpoS. Int J Med Microbiol. 2006;296(4–5):197–210.
   PubMed Web of Science ®Google Scholar
• Fakruddin M, Rahaman M, Ahmed MM, et al. Stress tolerant virulent strains of Cronobacter sakazakii from food. Biol Res. 2014;47(63):0717–6287.
   Google Scholar
• Alvarez-Ordonez A, Cummins C, Deasy T, et al. Acid stress management by Cronobacter sakazakii. Int J Food Microbiol. 2014;178:21–28.
   PubMed Web of Science ®Google Scholar
• Feeney A, Sleator RD. An in silico analysis of osmotolerance in the emerging gastrointestinal pathogen Cronobacter sakazakii. Bioeng Bugs. 2011;2(5):260–270.
   PubMedGoogle Scholar
• Burgess CM, Gianotti A, Gruzdev N, et al. The response of foodborne pathogens to osmotic and desiccation stresses in the food chain. Int J Food Microbiol. 2016;221:37–53.
   PubMed Web of Science ®Google Scholar
• Du XJ, Wang XY, Dong X, et al. Characterization of the desiccation tolerance of Cronobacter sakazakii strains. Front Microbiol. 2018;9:2867.
   PubMed Web of Science ®Google Scholar
• Jameelah M, Dewanti-Hariyadi R, Nurjanah S. Expression of rpoS, ompA and hfq genes of Cronobacter sakazakii strain Yrt2a during stress and viable but nonculturable state. Food Sci Biotechnol. 2018;27(3):915–920. Published 2018 Jan 18.
   PubMed Web of Science ®Google Scholar
• Liu L, Li Y, Wang X, et al. A phosphoethanolamine transferase specific for the 4ʹ-phosphate residue of Cronobacter sakazakii lipid A. J Appl Microbiol. 2016;121(5):1444–1456.
   PubMed Web of Science ®Google Scholar
• Chen S, Zhou Q, Tan X, et al. The global response of Cronobacter sakazakii cells to amino acid deficiency. Front Microbiol. 2018;9:1875. Published 2018 Aug 14.
   PubMed Web of Science ®Google Scholar
• Jain C. Overexpression and purification of tagged Escherichia coli proteins using a chromosomal knock-in strategy. Protein Expr Purif. 2006;46(2):294–298.
   PubMed Web of Science ®Google Scholar
• Heermann R, Zeppenfeld T, Jung K. Simple generation of site-directed point mutations in the Escherichia coli chromosome using Red(R)/ET(R) recombination. Microb Cell Fact. 2008;7:14.
   PubMed Web of Science ®Google Scholar
• Datsenko KA, Wanner BL. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci U S A. 2000;97(12):6640–6645.
   PubMed Web of Science ®Google Scholar
• Albermann C, Trachtmann N, Sprenger GA. A simple and reliable method to conduct and monitor expression cassette integration into the Escherichia coli chromosome. Biotechnol J. 2010;5(1):32–38.
   PubMed Web of Science ®Google Scholar
• De Mey M, Maertens J, Boogmans S, et al. Promoter knock-in: a novel rational method for the fine tuning of genes. BMC Biotechnol. 2010;10:26.
   PubMed Web of Science ®Google Scholar
• Lelong C, Aguiluz K, Luche S, et al. The Crl-RpoS regulon of Escherichia coli. Mol Cell Proteomics. 2007;6(4):648–659.
   PubMed Web of Science ®Google Scholar
• Spector MP, Aliabadi Z, Gonzalez T, et al. Global control in Salmonella typhimurium: two-dimensional electrophoretic analysis of starvation-, anaerobiosis-, and heat shock-inducible proteins. J Bacteriol. 1986;168(1):420–424.
   PubMed Web of Science ®Google Scholar
• Kouidhi B, Zmantar T, Hentati H, et al. Cell surface hydrophobicity, biofilm formation, adhesives properties and molecular detection of adhesins genes in Staphylococcus aureus associated to dental caries. Microb Pathog. 2010;49(1–2):14–22.
   PubMed Web of Science ®Google Scholar
• Kirov SM, Castrisios M, Shaw JG. Aeromonas flagella (polar and lateral) are enterocyte adhesins that contribute to biofilm formation on surfaces. Infect Immun. 2004;72(4):1939–1945.
   PubMed Web of Science ®Google Scholar
• Cerca N, Pier GB, Vilanova M, et al. Quantitative analysis of adhesion and biofilm formation on hydrophilic and hydrophobic surfaces of clinical isolates of Staphylococcus epidermidis. Res Microbiol. 2005;156(4):506–514.
   PubMed Web of Science ®Google Scholar
• Clemmer KM, Bonomo RA, Rather PN. Genetic analysis of surface motility in Acinetobacter baumannii. Microbiology (Reading). 2011 Sept;157(Pt 9):2534–2544. Epub 2011 Jun 23. PMID: 21700662; PMCID: PMC3352170.
   PubMedGoogle Scholar
• Wang Z, Wang J, Ren G, et al. Influence of core oligosaccharide of lipopolysaccharide to outer membrane behavior of Escherichia coli. Mar Drugs. 2015;13(6):3325–3339. Published 2015 May 27.
   PubMed Web of Science ®Google Scholar
• Li R, Yu C, Li Y, et al. SOAP2: an improved ultrafast tool for short read alignment. Bioinformatics. 2009;25(15):1966–1967.
   PubMed Web of Science ®Google Scholar
• Benjamini Y, Yekutieli D. The control of the false discovery rate in multiple testing under dependency. Ann Stat. 2001;29:1165–1188.
   Web of Science ®Google Scholar
• Zhao H, Peddada SD, Cui X. Mixed directional false discovery rate control in multiple pairwise comparisons using weighted p-values. Biom J. 2015;57(1):144–158.
   PubMed Web of Science ®Google Scholar
• Lehmann U, Kreipe H. Real-time PCR analysis of DNA and RNA extracted from formalin-fixed and paraffin-embedded biopsies. Methods. 2001;25(4):409–418.
   PubMed Web of Science ®Google Scholar
• Kolecka A, Chorvat D Jr, Bujdakova H. The impact of growth conditions on biofilm formation and the cell surface hydrophobicity in fluconazole susceptible and tolerant Candida albicans. Folia Microbiol (Praha). 2015;60(1):45–51.
   PubMed Web of Science ®Google Scholar
• Silva-Dias A, Miranda IM, Branco J, et al. Adhesion, biofilm formation, cell surface hydrophobicity, and antifungal planktonic susceptibility: relationship among Candida spp. Front Microbiol. 2015;6:205.
   PubMed Web of Science ®Google Scholar
• Bao X, Yang L, Chen L, et al. Virulent and pathogenic features on the Cronobacter sakazakii polymyxin resistant pmr mutant strain s-3. Microb Pathog. 2017;110:359–364.
   PubMed Web of Science ®Google Scholar
• Bao X, Jia X, Chen L, et al. Effect of polymyxin resistance (pmr) on biofilm formation of Cronobacter sakazakii. Microb Pathog. 2017;106:16–19.
   PubMed Web of Science ®Google Scholar
• Xu Z, Liu Z, Soteyome T, et al. Impact of pmrA on Cronobacter sakazakii planktonic and biofilm cells: a comprehensive transcriptomic study. Food Microbiol. 2021;98:103785.
   PubMed Web of Science ®Google Scholar
• Hua J, Jia X, Zhang L, et al. The characterization of two-component system PmrA/PmrB in Cronobacter sakazakii. Front Microbiol. 2020;11:903. Published 2020 June 17.
   PubMed Web of Science ®Google Scholar