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Original Articles

Host-dependence of in vitro reassortment dynamics among the Sathuperi and Shamonda Simbuviruses

ORCID Icon, , , , , , , , ORCID Icon & ORCID Icon show all
Pages 381-395 | Received 27 Jun 2018, Accepted 01 Feb 2019, Published online: 21 Mar 2019

References

  • Simon-Loriere E, Holmes EC. Why do RNA viruses recombine? Nat Rev Microbiol. 2011;9:617–626. doi:10.1038/nrmicro2614.
  • McDonald SM, Nelson MI, Turner PE, et al. Reassortment in segmented RNA viruses: mechanisms and outcomes. Nat Rev Microbiol. 2016;14:448–460. doi:10.1038/nrmicro.2016.46.
  • Perez-Losada M, Arenas M, Galan JC, et al. Recombination in viruses: mechanisms, methods of study, and evolutionary consequences. Infect Genet Evol. 2015;30:296–307. doi:10.1016/j.meegid.2014.12.022.
  • Allison AB, Stallknecht DE, Holmes EC. Evolutionary genetics and vector adaptation of recombinant viruses of the western equine encephalitis antigenic complex provides new insights into alphavirus diversity and host switching. Virology. 2015;474:154–162. doi:10.1016/j.virol.2014.10.024.
  • Chu YK, Owen RD, Jonsson CB. Phylogenetic exploration of hantaviruses in Paraguay reveals reassortment and host switching in South America. Virol J. 2011;8:399. doi:10.1186/1743-422X-8-399.
  • Mehle A, Dugan VG, Taubenberger JK, et al. Reassortment and mutation of the avian influenza virus polymerase PA subunit overcome species barriers. J Virol. 2012;86:1750–1757. doi:10.1128/JVI.06203-11.
  • Scholtissek C. Source for influenza pandemics. Eur J Epidemiol. 1994;10:455–458. doi: 10.1007/BF01719674
  • Vijaykrishna D, Mukerji R, Smith GJ. RNA virus reassortment: An evolutionary mechanism for host jumps and immune evasion. PLoS Pathog. 2015;11:e1004902. doi:10.1371/journal.ppat.1004902.
  • Briese T, Calisher CH, Higgs S. Viruses of the family Bunyaviridae: are all available isolates reassortants? Virology. 2013;446:207–216. S0042-6822(13)00450-9 [pii]. doi:10.1016/j.virol.2013.07.030.
  • Chinikar S, et al. Assessment of recombination in the S-segment genome of Crimean-Congo hemorrhagic fever virus in Iran. J Arthropod Borne Dis. 2016;10:12–23.
  • He CQ, Ding NZ. Discovery of severe fever with thrombocytopenia syndrome bunyavirus strains originating from intragenic recombination. J Virol. 2012;86:12426–12430. doi:10.1128/JVI.01317-12.
  • Lam TT, et al. Evolutionary and molecular analysis of the emergent severe fever with thrombocytopenia syndrome virus. Epidemics. 2013;5:1–10. doi:10.1016/j.epidem.2012.09.002.
  • Lian S, et al. Phylogenetic and recombination analysis of tomato spotted wilt virus. PLoS One. 2013;8:e63380. doi:10.1371/journal.pone.0063380.
  • Lukashev AN. Evidence for recombination in Crimean-Congo hemorrhagic fever virus. J Gen Virol. 2005;86:2333–2338. doi:10.1099/vir.0.80974-0.
  • Nikolic V, et al. Evidence of recombination in Tula virus strains from Serbia. Infect Genet Evol. 2014;21:472–478. doi:10.1016/j.meegid.2013.08.020.
  • Ramesh SV, Pappu HR. Sequence characterization, molecular phylogeny reconstruction and recombination analysis of the large RNA of Tomato spotted wilt virus (Tospovirus: Bunyaviridae) from the United States. BMC Res Notes. 2016;9:200. doi:10.1186/s13104-016-1999-1.
  • Zhang Z, et al. Identification of three new isolates of Tomato spotted wilt virus from different hosts in China: molecular diversity, phylogenetic and recombination analyses. Virol J. 2016;13:8, doi:10.1186/s12985-015-0457-3.
  • Causey OR, Kemp GE, Causey CE, et al. Isolations of Simbu-group viruses in Ibadan, Nigeria 1964-69, including the new types Sango, Shamonda, Sabo and Shuni. Ann Trop Med Parasitol. 1972;66:357–362. doi: 10.1080/00034983.1972.11686835
  • Lee VH. Isolation of viruses from field populations of culicoides (Diptera: Ceratopogonidae) in Nigeria. J Med Entomol. 1979;16:76–79. doi: 10.1093/jmedent/16.1.76
  • Yanase T, et al. The emergence in Japan of Sathuperi virus, a tropical simbu serogroup virus of the genus Orthobunyavirus. Arch Virol. 2004;149:1007–1013. doi:10.1007/s00705-003-0266-7.
  • Yanase T, et al. Isolation of bovine arboviruses from Culicoides biting midges (Diptera: Ceratopogonidae) in southern Japan: 1985–2002. J Med Entomol. 2005;42:63–67. doi: 10.1093/jmedent/42.1.63
  • Goller V, Hoper D, Schirrmeier H, et al. Schmallenberg virus as Possible Ancestor of Shamonda virus. Emerging Infect. Dis.. 2012;18:3. doi: 10.3201/eid1810.120835
  • Yanase T, et al. Genetic reassortment between Sathuperi and Shamonda viruses of the genus Orthobunyavirus in nature: implications for their genetic relationship to Schmallenberg virus. Arch Virol. 2012;157:1611–1616. doi:10.1007/s00705-012-1341-8.
  • Blomstrom, A. L. et al. Serological screening suggests presence of Schmallenberg virus in cattle, sheep and goat in the Zambezia Province, Mozambique. Transbound Emerg Dis. 2014. doi:10.1111/tbed.12234.
  • Mathew C, et al. Detection of serum neutralizing antibodies to Simbu sero-group viruses in cattle in Tanzania. BMC Vet Res. 2015;11:208. doi:10.1186/s12917-015-0526-2.
  • Oluwayelu D, Wernike K, Adebiyi A, et al. Neutralizing antibodies against Simbu serogroup viruses in cattle and sheep, Nigeria, 2012-2014. BMC Vet Res. 2018;14:277. doi: 10.1186/s12917-018-1605-y
  • Sibhat B, Ayelet G, Gebremedhin EZ, et al. Seroprevalence of Schmallenberg virus in dairy cattle in Ethiopia. Acta Trop. 2018;178:61–67. doi:10.1016/j.actatropica.2017.10.024.
  • Aguilar PV, et al. Iquitos virus: a novel reassortant Orthobunyavirus associated with human illness in Peru. PLoS Negl Trop Dis. 2011;5:e1315. doi:10.1371/journal.pntd.0001315. PNTD-D-11-00399 [ pii].
  • Briese T, Bird B, Kapoor V, et al. Batai and Ngari viruses: M segment reassortment and association with severe febrile disease outbreaks in East Africa. J Virol. 2006;80:5627–5630. doi:10.1128/JVI.02448-05.
  • Kobayashi T, et al. Genetic diversity and reassortments among Akabane virus field isolates. Virus Res. 2007;130:162–171. doi:10.1016/j.virusres.2007.06.007.
  • Nunes MR, Travassos da Rosa AP, Weaver SC, et al. Molecular epidemiology of group C viruses (Bunyaviridae, Orthobunyavirus) isolated in the Americas. J Virol. 2005;79:10561–10570. doi:10.1128/JVI.79.16.10561-10570.2005.
  • Reese SM, et al. Potential for La Crosse virus segment reassortment in nature. Virol J. 2008;5:164. doi:10.1186/1743-422X-5-164.
  • Yanase T, et al. Genetic characterization of Aino and Peaton virus field isolates reveals a genetic reassortment between these viruses in nature. Virus Res. 2010;153:1–7. doi:10.1016/j.virusres.2010.06.020.
  • Yanase T, et al. Genetic characterization of Batai virus indicates a genomic reassortment between orthobunyaviruses in nature. Arch Virol. 2006;151:2253–2260. doi:10.1007/s00705-006-0808-x.
  • Kirsanovs S, et al. Genetic reassortment between high-virulent and low-virulent Dobrava-Belgrade virus strains. Virus Genes. 2010;41:319–328. doi:10.1007/s11262-010-0523-2.
  • Rodriguez LL, Owens JH, Peters CJ, et al. Genetic reassortment among viruses causing hantavirus pulmonary syndrome. Virology. 1998;242:99–106. doi:10.1006/viro.1997.8990.
  • Borucki MK, Chandler LJ, Parker BM, et al. Bunyavirus superinfection and segment reassortment in transovarially infected mosquitoes. J Gen Virol. 1999;80(Pt 12):3173–3179. doi:10.1099/0022-1317-80-12-3173.
  • Chandler LJ, et al. Reassortment of La Crosse and Tahyna bunyaviruses in Aedes triseriatus mosquitoes. Virus Res. 1991;20:181–191. doi: 10.1016/0168-1702(91)90108-8
  • Wernike K, Brocchi E, Beer M. Effective interference between Simbu serogroup orthobunyaviruses in mammalian cells. Vet Microbiol. 2016;196:23–26. doi:10.1016/j.vetmic.2016.10.007.
  • Burt FJ, Paweska JT, Ashkettle B, et al. Genetic relationship in southern African Crimean-Congo haemorrhagic fever virus isolates: evidence for occurrence of reassortment. Epidemiol Infect. 2009;137:1302–1308. doi:10.1017/S0950268808001878.
  • Sin SH, McNulty BC, Kennedy GG, et al. Viral genetic determinants for thrips transmission of Tomato spotted wilt virus. Proc Natl Acad Sci U S A. 2005;102:5168–5173. doi:10.1073/pnas.0407354102.
  • Handke W, et al. Generation and characterization of genetic reassortants between Puumala and prospect Hill hantavirus in vitro. J Gen Virol. 2010;91:2351–2359. doi:10.1099/vir.0.021139-0.
  • Sobel Leonard A, et al. The effective rate of influenza reassortment is limited during human infection. PLoS Pathog. 2017;13:e1006203. doi:10.1371/journal.ppat.1006203.
  • Marshall N, Priyamvada L, Ende Z, et al. Influenza virus reassortment occurs with high frequency in the absence of segment mismatch. PLoS Pathog. 2013;9:e1003421. doi:10.1371/journal.ppat.1003421.
  • Muylkens B, et al. Biological characterization of bovine herpesvirus 1 recombinants possessing the vaccine glycoprotein E negative phenotype. Vet Microbiol. 2006;113:283–291. doi:S0378-1135(05)00377-9 [ pii] doi: 10.1016/j.vetmic.2005.11.038.
  • Hollander, M., Wolfe, D. A. New York: Wiley; 1973.
  • Pasieka TJ, Woolson RF, Grose C. Viral induced fusion and syncytium formation: measurement by the Kolmogorov-Smirnov statistical test. J Virol Methods. 2003;111:157–161. doi:S0166093403001526 [ pii]. doi: 10.1016/S0166-0934(03)00152-6
  • Etherington GJ, Dicks J, Roberts IN. Recombination Analysis Tool (RAT): a program for the high-throughput detection of recombination. Bioinformatics. 2005;21:278–281. doi:10.1093/bioinformatics/bth500.