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Antimicrobial Agents

Methicillin-resistant Staphylococcus aureus in China: a multicentre longitudinal study and whole-genome sequencing

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Pages 532-542 | Received 01 Oct 2021, Accepted 17 Jan 2022, Published online: 10 Feb 2022

References

  • Giulieri SG, Tong SYC, Williamson DA. Using genomics to understand meticillin- and vancomycin-resistant Staphylococcus aureus infections. Microb Genom. 2020;6(1).
  • Lakhundi S, Zhang K. Methicillin-resistant Staphylococcus aureus: molecular characterization, evolution, and epidemiology. Clin Microbiol Rev. 2018;31(4):e00020–18.
  • Chen CJ, Huang YC. New epidemiology of Staphylococcus aureus infection in Asia. Clin Microbiol Infec. 2014;20(7):605–623.
  • He W, Chen H, Zhao C, et al. Population structure and characterisation of Staphylococcus aureus from bacteraemia at multiple hospitals in China: association between antimicrobial resistance, toxin genes and genotypes. Int J Antimicrob Ag. 2013;42(3):211–219.
  • Xiao M, Wang H, Zhao Y, et al. National surveillance of methicillin-resistant Staphylococcus aureus in China highlights a still-evolving epidemiology with 15 novel emerging multilocus sequence types. J Clin Microbiol. 2013;51(11):3638–3644.
  • Chen Y, Sun L, Wu D, et al. Using core-genome Multilocus sequence typing to monitor the changing epidemiology of methicillin-resistant Staphylococcus aureus in a teaching hospital. Clin Infect Dis. 2018;67(suppl_2):S241–S248.
  • Dylus D, Pillonel T, Opota O, et al. NGS-Based S. aureus typing and outbreak analysis in clinical microbiology laboratories: lessons learned from a Swiss-wide proficiency test. Front Microbiol. 2020;11:591093.
  • Patel K, Godden SM, Royster EE, et al. Prevalence, antibiotic resistance, virulence and genetic diversity of Staphylococcus aureus isolated from bulk tank milk samples of U. S. dairy herds. BMC Genomics. 2021;22(1):367.
  • Chen Y, Sun L, Ba X, et al. Epidemiology, evolution and cryptic susceptibility of methicillin-resistant Staphylococcus aureus in China: a whole-genome-based survey. Clin Microbiol Infect. 2021, 28(1):85–92.
  • Gu F, He W, Xiao S, et al. Antimicrobial resistance and molecular epidemiology of Staphylococcus aureus causing bloodstream infections at Ruijin Hospital in Shanghai from 2013 to 2018. Sci Rep. 2020 Apr 7;10(1):6019.
  • Vos ASd, Vlas SJd, Lindsay JA, et al. Understanding MRSA clonal competition within a UK hospital; the possible importance of density dependence. Epidemics-neth. 2021;37:100511.
  • China Antimicrobial Resistance Surveillance System Report 2021. Available from: http://www.carss.cn/Report.
  • CLSI. Performance Standards for Antimicrobial Susceptibility Testing, M100, 2020.
  • Testing TECoAS. Breakpoint tables for interpretation of MICs and zone diameters, version 10.0, 2020.
  • Treangen TJ, Ondov BD, Koren S, et al. The harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes. Genome Biol. 2014;15(11):524.
  • Chen L, Yang J, Yu J, et al. VFDB: a reference database for bacterial virulence factors. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D325–D328.
  • Naushad S, Naqvi SA, Nobrega D, et al. Comprehensive virulence gene profiling of Bovine non-aureus staphylococci based on whole-genome sequencing data. Msystems. 2019;4(2):e00098–18.
  • Monecke S, Slickers P, Gawlik D, et al. Molecular typing of ST239-MRSA-III from diverse geographic locations and the evolution of the SCCmec III element during its intercontinental spread. Front Microbiol. 2018;9:1436.
  • Larsen J, Petersen A, Larsen AR, et al. Emergence of livestock-associated Methicillin-resistant Staphylococcus aureus bloodstream infections in Denmark. Clin Infect Dis. 2017 Oct 1;65(7):1072–1076.
  • Yu F, Cienfuegos-Gallet AV, Cunningham MH, et al. Molecular evolution and adaptation of livestock-associated Methicillin-resistant Staphylococcus aureus (LA-MRSA) sequence type 9. mSystems. 2021 Jun 29;6(3):e0049221.
  • van Wamel WJ, Rooijakkers SH, Ruyken M, et al. The innate immune modulators staphylococcal complement inhibitor and chemotaxis inhibitory protein of Staphylococcus aureus are located on beta-hemolysin-converting bacteriophages. J Bacteriol. 2006 Feb;188(4):1310–1315.
  • Coleman DC, Shore AC, Goering RV, et al. Editorial: new insights and updates on the molecular epidemiology and antimicrobial resistance of MRSA in humans in the whole-genome sequencing era. Front Microbiol. 2019;10:637.
  • Li S, Sun S, Yang C, et al. The changing pattern of population structure of Staphylococcus aureus from bacteremia in China from 2013 to 2016: ST239-030-MRSA replaced by ST59-t437. Front Microbiol. 2018;9:332.
  • Dai Y, Liu J, Guo W, et al. Decreasing methicillin-resistant Staphylococcus aureus (MRSA) infections is attributable to the disappearance of predominant MRSA ST239 clones, Shanghai, 2008–2017. Emerg Microbes Infec. 2019;8(1):471–478.
  • Yu F, Li T, Huang X, et al. Virulence gene profiling and molecular characterization of hospital-acquired Staphylococcus aureus isolates associated with bloodstream infection. Diagn Micr Infec Dis. 2012;74(4):363–368.
  • Li T, Song Y, Zhu Y, et al. Current status of Staphylococcus aureus infection in a central teaching hospital in Shanghai, China. BMC Microbiol. 2013;13(1):153.
  • Cheng H, Yuan W, Zeng F, et al. Molecular and phenotypic evidence for the spread of three major methicillin-resistant Staphylococcus aureus clones associated with two characteristic antimicrobial resistance profiles in China. J Antimicrob Chemoth. 2013;68(11):2453–2457.
  • Pomorska K, Jakubu V, Malisova L, et al. Antibiotic resistance, spa typing and clonal analysis of methicillin-resistant Staphylococcus aureus (MRSA) isolates from blood of patients hospitalized in the Czech Republic. Antibiotics. 2021;10(4):395.
  • Smith JT, Eckhardt EM, Hansel NB, et al. Genomic epidemiology of methicillin-resistant and -susceptible Staphylococcus aureus from bloodstream infections. BMC Infect Dis. 2021;21(1):589.
  • Niek WK, Teh CSJ, Idris N, et al. Methicillin-resistant Staphylococcus aureus bacteraemia, 2003–2015: comparative evaluation of changing trends in molecular epidemiology and clinical outcomes of infections. Infect Genetics Evol. 2020;85:104567.
  • Huh K, Chung DR. Changing epidemiology of community-associated methicillin-resistant Staphylococcus aureus in the Asia-Pacific region. Expert Rev Anti-Infe. 2016;14(11):1007–1022.
  • David MZ, Daum RS. Community-associated methicillin-resistant Staphylococcus aureus: epidemiology and clinical consequences of an emerging epidemic. Clin Microbiol Rev. 2010;23(3):616–687.
  • Lakhundi S, Zhang K. Methicillin-resistant Staphylococcus aureus: molecular characterization, evolution, and epidemiology. Clin Microbiol Rev. 2018;31(4).
  • Huh K, Chung DR. Changing epidemiology of community-associated methicillin-resistant Staphylococcus aureus in the Asia-Pacific region. Expert Rev Anti Infect Ther. 2016 Nov;14(11):1007–1022.
  • Niek WK, Teh CSJ, Idris N, et al. Methicillin-resistant Staphylococcus aureus bacteraemia, 2003–2015: comparative evaluation of changing trends in molecular epidemiology and clinical outcomes of infections. Infect Genet Evol. 2020 Nov;85:104567.
  • David MZ, Daum RS. Community-associated methicillin-resistant Staphylococcus aureus: epidemiology and clinical consequences of an emerging epidemic. Clin Microbiol Rev. 2010 Jul;23(3):616–687.
  • Li M, Wang Y, Zhu Y, et al. Increased community-associated infections caused by Panton-Valentine leukocidin-negative MRSA, shanghai, 2005–2014. Emerg Infect Dis. 2016 Nov;22(11):1988–1991.
  • Zhang X, Xu X, Yuan W, et al. Complete genome sequence of Staphylococcus aureus XN108, an ST239-MRSA-SCCmec III strain with intermediate vancomycin resistance isolated in mainland China. Genome Announc. 2014;2(4):e00449–14.
  • He L, Zheng H-X, Wang Y, et al. Detection and analysis of methicillin-resistant human-adapted sequence type 398 allows insight into community-associated methicillin-resistant Staphylococcus aureus evolution. Genome Med. 2018;10(1):5.
  • He W, Chen H, Zhao C, et al. Population structure and characterisation of Staphylococcus aureus from bacteraemia at multiple hospitals in China: association between antimicrobial resistance, toxin genes and genotypes. Int J Antimicrob Agents. 2013 Sep;42(3):211–219.
  • Wang X, Liu Q, Zhang H, et al. Molecular characteristics of community-associated Staphylococcus aureus isolates from pediatric patients with bloodstream infections between 2012 and 2017 in Shanghai, China. Front Microbiol. 2018;9:1211.
  • Ye X, Wang X, Fan Y, et al. Genotypic and phenotypic markers of Livestock-Associated methicillin-resistant Staphylococcus aureus CC9 in humans. Appl Environ Microb. 2016;82(13):3892–3899.
  • Liu K, Tao L, Li J, et al. Characterization of Staphylococcus aureus isolates from cases of clinical Bovine Mastitis on large-scale Chinese dairy farms. Front Vet Sci. 2020;7:580129.
  • Jin Y, Yu X, Chen Y, et al. Characterization of highly virulent community-associated methicillin-resistant Staphylococcus aureus ST9-SCCmec XII causing bloodstream infection in China. Emerg Microbes Infec. 2020;9(1):2526–2535.
  • Yu F, Cienfuegos-Gallet AV, Cunningham MH, et al. Molecular evolution and adaptation of livestock-associated Methicillin-resistant Staphylococcus aureus (LA-MRSA) sequence type 9. Msystems. 2021;6(3):e00492–21.
  • Song Z, Gu F-F, Guo X-K, et al. Antimicrobial resistance and molecular characterization of Staphylococcus aureus causing childhood pneumonia in Shanghai. Front Microbiol. 2017;8:455.
  • Fu J, Wang K, Ye C, et al. Study on the virulome and resistome of a vancomycin intermediate-resistance Staphylococcus aureus. Microb Pathogenesis. 2020;145:104187.
  • Liang Y, Qiu L, Zheng X, et al. Trend in antimicrobial resistance of Staphylococcus aureus: results from the China antimicrobial surveillance network (CHINET) in the last 15-year-period reports (2005–2019). Infect Drug Resist. 2021;14:2179–2181.
  • Olya ZN, Najar-Peerayeh S, Yadegar A, et al. Clonal diversity and genomic characterization of panton-valentine Leukocidin (PVL)-positive Staphylococcus aureus in Tehran, Iran. BMC Infect Dis. 2021;21(1):372.
  • McGuinness SL, Holt DC, Harris TM, et al. Clinical and molecular epidemiology of an emerging Panton-Valentine Leukocidin-positive ST5 methicillin-resistant Staphylococcus aureus clone in Northern Australia. Msphere. 2021;6(1).
  • Wang M, Zheng Y, Mediavilla JR, et al. Hospital dissemination of tst-1-positive clonal complex5 (CC5) Methicillin-resistant Staphylococcus aureus. Front Cell Infect Microbiol. 2017;7:101.