Effect of genomic variations in severe fever with thrombocytopenia syndrome virus on the disease lethality

References

• Yu XJ, Liang MF, Zhang SY, et al. Fever with thrombocytopenia associated with a novel bunyavirus in China. N Engl J Med. 2011 Apr 21;364(16):1523–1532.
   PubMed Web of Science ®Google Scholar
• Li JC, Wang YN, Zhao J, et al. A review on the epidemiology of severe fever with thrombocytopenia syndrome. Chin J Epidemiol. 2021 Dec 10;42(12):2226–2233.
   Google Scholar
• Li H, Lu QB, Xing B, et al. Epidemiological and clinical features of laboratory-diagnosed severe fever with thrombocytopenia syndrome in China, 2011-17: a prospective observational study. Lancet Infect Dis. 2018 Oct;18(10):1127–1137.
   PubMed Web of Science ®Google Scholar
• Kim YR, Yun Y, Bae SG, et al. Severe fever with thrombocytopenia syndrome virus infection, South Korea, 2010. Emerg Infect Dis. 2018 Nov;24(11):2103–2105.
   PubMed Web of Science ®Google Scholar
• Takahashi T, Maeda K, Suzuki T, et al. The first identification and retrospective study of severe fever with thrombocytopenia syndrome in Japan. J Infect Dis. 2014 Mar;209(6):816–827.
   PubMed Web of Science ®Google Scholar
• Tran XC, Yun Y, Van An L, et al. Endemic severe fever with thrombocytopenia syndrome, Vietnam. Emerg Infect Dis. 2019 May;25(5):1029–1031.
   PubMed Web of Science ®Google Scholar
• Win AM, Nguyen YTH, Kim Y, et al. Genotypic heterogeneity of Orientia tsutsugamushi in scrub typhus patients and thrombocytopenia syndrome co-infection, Myanmar. Emerg Infect Dis. 2020 Aug;26(8):1878–1881.
   PubMed Web of Science ®Google Scholar
• Zhuang L, Sun Y, Cui XM, et al. Transmission of severe fever with thrombocytopenia syndrome virus by Haemaphysalis longicornis ticks, China. Emerg Infect Dis. 2018 May;24(5):868–871.
   PubMed Web of Science ®Google Scholar
• Tang X, Wu W, Wang H, et al. Human-to-human transmission of severe fever with thrombocytopenia syndrome bunyavirus through contact with infectious blood. J Infect Dis. 2013 Mar 1;207(5):736–739.
   PubMed Web of Science ®Google Scholar
• Jiang XL, Zhang S, Jiang M, et al. A cluster of person-to-person transmission cases caused by SFTS virus in Penglai, China. Clin Microbiol Infect. 2015 Mar;21(3):274–279.
   PubMed Web of Science ®Google Scholar
• Koga S, Takazono T, Ando T, et al. Severe fever with thrombocytopenia syndrome virus RNA in semen, Japan. Emerg Infect Dis. 2019 Nov;25(11):2127–2128.
   PubMed Web of Science ®Google Scholar
• Mendoza CA, Ebihara H, Yamaoka S. Immune modulation and immune-mediated pathogenesis of emerging tickborne Banyangviruses. Vaccines (Basel). 2019 Sep 20;7(4):125.
   PubMed Web of Science ®Google Scholar
• Yoshikawa T, Shimojima M, Fukushi S, et al. Phylogenetic and geographic relationships of severe fever with thrombocytopenia syndrome virus in China, South Korea, and Japan. J Infect Dis. 2015 Sep 15;212(6):889–898.
   PubMed Web of Science ®Google Scholar
• Wu X, Li M, Zhang Y, et al. Novel SFTSV phylogeny reveals new reassortment events and migration routes. Virol Sin. 2021 Apr;36(2):300–310.
   PubMed Web of Science ®Google Scholar
• Shi J, Hu S, Liu X, et al. Migration, recombination, and reassortment are involved in the evolution of severe fever with thrombocytopenia syndrome bunyavirus. Infect Genet Evol. 2017 Jan;47:109–117.
   PubMed Web of Science ®Google Scholar
• Zhan J, Wang Q, Cheng J, et al. Current status of severe fever with thrombocytopenia syndrome in China. Virol Sin. 2017 Feb;32(1):51–62.
   PubMed Web of Science ®Google Scholar
• Liu W, Lu QB, Cui N, et al. Case-fatality ratio and effectiveness of ribavirin therapy among hospitalized patients in China who had severe fever with thrombocytopenia syndrome. Clin Infect Dis. 2013 Nov;57(9):1292–1299.
   PubMed Web of Science ®Google Scholar
• Deng L, Liu M, Hua S, et al. Network of co-mutations in Ebola virus genome predicts the disease lethality. Cell Res. 2015 Jun;25(6):753–756.
   PubMed Web of Science ®Google Scholar
• Li H, Zhang LK, Li SF, et al. Calcium channel blockers reduce severe fever with thrombocytopenia syndrome virus (SFTSV) related fatality. Cell Res. 2019 Sep;29(9):739–753.
   PubMed Web of Science ®Google Scholar
• Li S, Li H, Zhang YL, et al. SFTSV infection induces BAK/BAX-dependent mitochondrial DNA release to trigger NLRP3 inflammasome activation. Cell Rep. 2020 Mar 31;30(13):4370–4385.e7.
   PubMed Web of Science ®Google Scholar
• Stern A, Yeh MT, Zinger T, et al. The evolutionary pathway to virulence of an RNA virus. Cell. 2017 Mar 23;169(1):35–46.e19.
   PubMed Web of Science ®Google Scholar
• Tsuda Y, Igarashi M, Ito R, et al. The amino acid at position 624 in the glycoprotein of SFTSV (severe fever with thrombocytopenia virus) plays a critical role in low-pH-dependent cell fusion activity. Biomed Res. 2017;38(2):89–97.
   PubMed Web of Science ®Google Scholar
• Tani H, Kawachi K, Kimura M, et al. Identification of the amino acid residue important for fusion of severe fever with thrombocytopenia syndrome virus glycoprotein. Virology. 2019 Sep;535:102–110.
   PubMed Web of Science ®Google Scholar
• Noda K, Tsuda Y, Kozawa F, et al. The polarity of an amino acid at position 1891 of severe fever with thrombocytopenia syndrome virus L protein is critical for the polymerase activity. Viruses. 2020 Dec 27;13(1):33.
   PubMed Web of Science ®Google Scholar
• Choi Y, Park SJ, Sun Y, et al. Severe fever with thrombocytopenia syndrome phlebovirus non-structural protein activates TPL2 signalling pathway for viral immunopathogenesis. Nat Microbiol. 2019 Mar;4(3):429–437.
   PubMed Web of Science ®Google Scholar
• Yun SM, Park SJ, Kim YI, et al. Genetic and pathogenic diversity of severe fever with thrombocytopenia syndrome virus (SFTSV) in South Korea. JCI Insight. 2020 Jan 30;5(2):e129531.
   PubMed Web of Science ®Google Scholar
• Li H, Li X, Lv S, et al. Single-cell landscape of peripheral immune responses to fatal SFTS. Cell Rep. 2021;37(8):110039.
   PubMed Web of Science ®Google Scholar
• Kwon JS, Jin S, Kim JY, et al. Viral and immunologic factors associated with fatal outcome of patients with severe fever with thrombocytopenia syndrome in Korea. Viruses. 2021 Nov 23;13(12):2351.
   PubMed Web of Science ®Google Scholar
• Liu Q, He B, Huang SY, et al. Severe fever with thrombocytopenia syndrome, an emerging tick-borne zoonosis. Lancet Infect Dis. 2014 Aug;14(8):763–772.
   PubMed Web of Science ®Google Scholar
• Sun Q, Jin C, Zhu L, et al. Host responses and regulation by NFκB signaling in the liver and liver epithelial cells infected with a novel tick-borne bunyavirus. Sci Rep. 2015 Jul 2;5:11816.
   PubMed Web of Science ®Google Scholar
• Park SJ, Kim Y, Park A, et al. Ferret animal model of severe fever with thrombocytopenia syndrome phlebovirus for human lethal infection and pathogenesis. Nat Microbiol. 2019 Mar;4(3):438–446.
   PubMed Web of Science ®Google Scholar
• Briese T, Calisher CH, Higgs S. Viruses of the family Bunyaviridae: are all available isolates reassortants? Virology. 2013 Nov;446(1–2):207–216.
   PubMed Web of Science ®Google Scholar