References
- Hammer MP, Adams M, Unmack PJ, Walker KF. 2007. A rethink on Retropinna: conservation implications of new taxa and significant genetic sub-structure in Australian smelts (Pisces: Retropinnidae). Mar Freshwater Res. 58:327–341.
- Hughes JM, Schmidt DJ, Macdonald JI, Huey JA, Crook DA. 2014. Low interbasin connectivity in a facultatively diadromous fish: evidence from genetics and otolith chemistry. Mol Ecol. 23:1000–1013.
- Ishiguro NB, Miya M, Nishida M. 2003. Basal euteleostean relationships: a mitogenomic perspective on the phylogenetic reality of the “Protacanthopterygii”. Mol Phylogenetics Evol. 27:476–488.
- Iwasaki W, Fukunaga T, Isagozawa R, Yamada K, Maeda Y, Satoh TP, Sado T, Mabuchi K, Takeshima H, Miya M, Nishida M. 2013. MitoFish and MitoAnnotator: a mitochondrial genome database of fish with an accurate and automatic annotation pipeline. Mol Biol Evol. 30:2531–2540.
- Katoh K, Misawa K, Kuma K, Miyata T. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 30:3059–3066.
- Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28:1647–1649.
- Page TJ, Hughes JM. 2014. Contrasting insights provided by single and multispecies data in a regional comparative phylogeographic study. Biol J Linnean Soc. 111:554–569.
- Stamatakis A. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics. 22:2688–2690.