Advanced search
Publication Cover
Mitochondrial DNA Part B
Resources
Volume 2, 2017 - Issue 1
Submit an article Journal homepage
747
Views
1
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete mitogenome of the live-bearing fish Xenotoca variata (Bean, 1887) (Actinopterygii: Goodeidae)

Diushi Keri Corona-SantiagoDepartamento de Biodiversidad y Biología Evolutiva, Museo Nacional de Ciencias Naturales, Madrid, Spain; View further author information
,
Carolina Galván-TiradoLaboratorio de Genética para la Conservación, Centro de Investigaciones Biológicas del Noroeste, S.C, La Paz, Mexico; View further author information
,
Francisco Javier García-De LeónLaboratorio de Genética para la Conservación, Centro de Investigaciones Biológicas del Noroeste, S.C, La Paz, Mexico; Correspondence[email protected]
View further author information
,
Ignacio DoadrioDepartamento de Biodiversidad y Biología Evolutiva, Museo Nacional de Ciencias Naturales, Madrid, Spain; View further author information
&
Omar Domínguez-DomínguezLaboratorio de Biología Acuática, Facultad de Biología, Universidad Michoacana de San Nicolás de Hidalgo, Morelia, MexicoView further author information
Pages 119-121 | Received 18 Jan 2017, Accepted 28 Jan 2017, Published online: 23 Feb 2017

References

  • Andrews S. 2010. FastQC: a quality control tool for high throughput sequence data. Available from: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/.
  • Bean TH. 1887. Descriptions of five new species of fishes sent by Prof. A. Dugès from the province of Guanajuato, Mexico. Proc U S Nat Mus. 10:370–375.
  • Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 30:2114–2120.
  • Corona-Santiago DK, Domínguez-Domínguez O. 2013. Systematik der Hochlandkärplinge. In: Kempkes M, Köck M, Stawikouski R, editors. Beiträge zur Biologie und zum Artenschutz der Hochlandkärpflinge. Germany: Westarp Wissenschaften; p 13–28.
  • Domínguez-Domínguez O. 2008. Filogeografía de Zoogoneticus quitzeoensis, Xenotoca variata y Alloophorus robustus (Cyprinodontiformes: Goodeidae) en el centro de México: Implicaciones taxonómicas y de conservación [Dissertation]. Mexico: Instituto de Biología, Universidad Autónoma de México.
  • Domínguez-Domínguez O, Pedraza-Lara C, Gurrola-Sánchez N, Pérez-Rodríguez R, Israde-Alcántara I, Garduño Monroy VH, Doadrio I, Pérez-Ponce De Léon G, Brooks DR. Historical biogeography of the Goodeinae (Cyprinodontiforms). In: Uribe MC, Grier HJ, editors. 2010. Viviparous fishes II. Homestead. Florida: New Life Publications; p 13–30.
  • Faircloth BC, Glenn TC. 2012. Not all sequence tags are created equal: designing and validating sequence identification tags rogust to indels. PLoS One. 7:e42543.
  • Fisher S, Barry A, Abreu J, Minie B, Nolan J, Delorey TM, Young G, Fennell TJ, Allen A, Ambrogio L, et al. 2011. A scalable, fully automated process for construction of sequence-ready human exome targeted capture libraries. Genome Biol. 12:R1.
  • Fitzsimons JM. 1972. A revision of two genera of Goodeid fishes (Cyprinodontiformes, Osteichthyes) from the Mexican Plateau. Copeia. 4:728–756.
  • Iwasaki W, Fukunaga T, Isagozawa R, Yamada K, Maeda Y, Satoh TP, Sado T, Mabuchi K, Takeshima H, Miya M, Nishida M. 2013. MitoFish and MitoAnnotator: a mitochondrial genome database of fish with an accurate and automatic annotation pipeline. Mol Biol Evol. 30:2531–2540.
  • Katoh K, Misawa K, Kuma K, Miyata T. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 30:3059–3066.
  • Luo R, Liu B, Xie Y, Li Z, Huang W, Yuan J, He G, Chen Y, Pan Q, Liu Y, et al. 2012. Soapdenovo2: an empirically improved memory-efficient short-read de novo assembler. Gigascience. 1:18.
  • Matías-Garcia C. Conducta, conflicto sexual y especiación. In: Martínez-Gómez M, Velázquez-Moctezuma J, editors. 1998. Bases neurobiológicas y ecológicas de la conducta. Mexico: UAT, UAM, UNAM, UV.
  • Moyaho A, Macías-Garcia C, Manjarrez J. 2004. Predation risk is associated with the geographic variation of a sexually selected trait in a viviparous fish, Xenotoca variata. J Zool. 262:265–270.
  • Ritchie MG, Hamil RM, Graves JA, Magurran AE, Webb SA, Macías GC. 2007. Sexual differentiation: population genetic divergence and sexual dimorphism in Mexican goodeid fish. J Evol Biol. 20:2048–2055.
  • Schattner O, Brooks AN, Lowe TM. 2005. The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs. Nucleic Acids Res. 33:W686–W689.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.