561
Views
0
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

Next generation sequencing yields the mitochondrial genome of the critically endangered Sarothrura ayresi (white-winged flufftail)

, , &
Pages 236-237 | Received 15 Mar 2017, Accepted 10 Apr 2017, Published online: 24 Apr 2017

References

  • Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. J Mol Biol. 215:403–410.
  • Birdlife International. 2015. Global IUCN Red List for birds. [cited 2016 July 15]. Available from: http://www.birdlife.org/datazone/species/factsheet/22692245
  • Bernt M, Donath A, Jühling F, Externbrink F, Florentz C, Fritzsch G, Pütz J, Middendorf M, Stadler PF. 2013. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol Phylogenet Evol. 69:313–319.
  • Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina Sequence Data. Bioinformatics. 30:2114–2120.
  • Davies GBP, Smit-Robinson HA, Drummond IMM, Gardner B, Rautenbach S, Van Stuyvenberg D, Nattrass C, Pretorius M, Pietersen DW, Symes CT. 2015. Recent records of the white-winged flufftail Sarothrura Ayresi (Aves, Sarothruridae) in South Africa, including details of a survey of high-altitude wetlands in 2013–2014. Durban Nat Sci Museum Novitates. 37:62–75.
  • Desjardins P, Morais R. 1990. Sequence and gene organization of the chicken mitochondrial genome. A novel gene order in higher vertebrates. J Mol Biol. 212:599–634.
  • De Smidt A. 2003. Ethiopian white-winged flufftail (Sarothrura ayresi) action plan. Johannesburg: BirdLife South Africa.
  • IUCN. 2015. The IUCN Red List of Threatened Species. Version 2015-4.
  • Sande E, Ndang’ang’a PK, Wakelin J, Wondafrash M, Drummond M, Dereliev S. (Compilers). 2008. International Single Species Action Plan for the Conservation of the White-winged Flufftail (Sarothrura ayresi). CMS Technical Series No. 19, AEWA Technical Series No. 38. Bonn, Germany.
  • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. 2013. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol. 30:2725–2729.
  • Taylor PB. 1994. The biology, ecology and conservation of four fluff tail species, Sarothrura (Aves: Rallidae). Pietermaritzburg: University of Natal.
  • Taylor PB. 2005. White-winged Flufftail. In: Hockey PAR, Dean WRJ, Ryan PG, editors. Roberts – birds of Southern Africa.
  • Wyman SK, Jansen RK, Boore JL. 2004. Automatic annotation of organellar genomes with DOGMA. Bioinformatics. 20:3252–3255.