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Mitochondrial DNA Part B
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Volume 2, 2017 - Issue 1
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Mitogenome Announcement

Complete mitochondrial genome of a bat-eared fox (Otocyon megalotis), along with phylogenetic considerations

Michael WestburyDepartment of Mathematics and Natural Sciences, Evolutionary Adaptive Genomics, Institute for Biochemistry and Biology, University of Potsdam, Potsdam, Germany; Correspondence[email protected]
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Fredrik DalerumResearch Unit of Biodiversity (UO-CSIC-PA), Mieres Campus, University of Oviedo, Asturias, Spain; ;Department of Zoology, Stockholm University, Stockholm, Sweden; ;Department of Zoology, Mammal Research Institute, University of Pretoria, Pretoria, South AfricaView further author information
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Karin NorénDepartment of Zoology, Stockholm University, Stockholm, Sweden; View further author information
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Michael HofreiterDepartment of Mathematics and Natural Sciences, Evolutionary Adaptive Genomics, Institute for Biochemistry and Biology, University of Potsdam, Potsdam, Germany; View further author information
Pages 298-299 | Received 04 Apr 2017, Accepted 13 May 2017, Published online: 24 May 2017

References

  • Bernt M, Donath A, Jühling F, Externbrink F, Florentz C, Fritzsch G, Pütz J, Middendorf M, Stadler PF. 2013. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol Phylogenet Evol. 69:313–319.
  • Clark HO Jr. 2005. Otocyon megalotis. Mamm Species. 76:1–5.
  • Drummond AJ, Suchard MA, Xie D, Rambaut A. 2012. Bayesian phylogenetics with BEAUti and the BEAST 1.7. Mol Biol Evol. 29:1969–1973.
  • Gernhard T. 2008. The conditioned reconstructed process. J Theor Biol. 253:769–778.
  • Hahn C, Bachmann L, Chevreux B. 2013. Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads—a baiting and iterative mapping approach. Nucleic Acids Res. 41:e129.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30:772–780.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28:1647–1649.
  • le Roux A, Beishuizen R, Brekelmans W, Ganswindt A, Paris M, Dalerum F. 2014. Innovative parental care in a myrmecophageous mammal. Acta Ethol. 17:63–66.
  • Lindblad-Toh K, Wade CM, Mikkelsen TS, Karlsson EK, Jaffe DB, Kamal M, Clamp M, Chang JL, Kulbokas EJ, III Zody MC, et al. 2005. Genome sequence, comparative analysis and haplotype structure of the domestic dog. Nature. 438:803–819.
  • Magoč T, Salzberg SL. 2011. FLASH: fast length adjustment of short reads to improve genome assemblies. Bioinformatics. 27:2957–2963.
  • Martin M. 2011. Cutadapt removes adapter sequences from high-throughput sequencing reads. EMBnet.j. 17:10–12.
  • Miller MA, Pfeiffer W, Schwartz T. 2010. Creating the CIPRES Science Gateway for inference of large phylogenetic trees. In: 2010 Gateway Computing Environments Workshop (GCE). p. 1–8.
  • Posada D. 2008. jModelTest: phylogenetic model averaging. Mol Biol Evol. 25:1253–1256.
  • Schmieder R, Edwards R. 2011. Quality control and preprocessing of metagenomic datasets. Bioinformatics. 27:863–864.
  • Sillero-Zubiri C, Macdonald DW. 2004. The biology and conservation of wild canids. Oxford: Oxford University Press.
  • Yule GU. 1925. A mathematical theory of evolution, based on the conclusions of Dr. JC Willis, FRS. Proc Math Phys Eng Sci. 213:21–87.

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