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Mitochondrial DNA Part B
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Volume 2, 2017 - Issue 2
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Mitogenome Announcement

The complete mitochondrial genome of the horned lizard Phrynosoma blainvillii (Squamata: Phrynosomatidae) from California, USA

Laura AyalaDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
,
Ga Hun BooUniversity Herbarium, University of California, Berkeley, CA, USA; View further author information
,
Sung Min BooDepartment of Biology, Chungnam National University, Daejeon, Korea; View further author information
,
Brandon CluffDepartment of Ecology and Evolutionary Biology, University of California, Santa Cruz, CA, USA; View further author information
,
Gage H. DaytonUniversity of California Natural Reserves, Santa Cruz, CA, USA; View further author information
,
Leah EdwardsDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
,
Armando GarciaDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
,
Mariana GomezDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
,
Thomas A. JimenezDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
,
Jeffery R. HugheyDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; Correspondence[email protected]
View further author information
,
Timothy HuynhDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
,
Natalia I. MarquezDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
,
Ana I. MezaDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
,
Alexis D. MunozDepartment of Molecular, Cell and Developmental Biology, University of California, Santa Cruz, CA, USAView further author information
,
Cristina PerezDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
,
Dominic PinaDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
,
Michael PorrasDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
,
Paola E. RazoDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
,
Alexis RosalesDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
,
Bailee RusconiDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
,
Noel SalvadorDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
,
Alicia SteinhardtDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
,
Ruben TinajeroDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
,
Nancy WheatDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
,
Frances L. WongDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
,
Ann WrightDivision of Mathematics, Science and Engineering, Hartnell College, Salinas, CA, USA; View further author information
& Hartnell College Genomics Group show all
Pages 851-852 | Received 08 Nov 2017, Accepted 17 Nov 2017, Published online: 25 Nov 2017

References

  • Bernardo PH, Aguilera-Miller EF, Álvarez-Castañeda ST, Cruz FRMDL, Murphy RW. 2016. The complete mitochondrial genome of the black-tailed brush lizard Urosaurus nigricaudus (Reptilia, Squamata, Phrynosomatidae). Mitochondrial DNA A DNA Mapp Seq Anal. 27:4023–4025.
  • Bernt M, Donath A, Jühling F, Externbrink F, Florentz C, Fritzsch G, Pütz J, Middendorf M, Stadler PF. 2013. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol Phylogenet Evol. 69:313–319.
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  • Leaché AD, Banbury BL, Felsenstein J, Nieto-Montes de Oca A, Stamatakis A. 2015a. Short tree, long tree, right tree, wrong tree: new acquisition bias corrections for inferring SNP phylogenies. Syst Biol. 64:1032–1047.
  • Leaché AD, Chavez AS, Jones LN, Grummer JA, Gottscho AD, Linkem CW. 2015b. Phylogenomics of phrynosomatid lizards: conflicting signals from sequence capture versus restriction site associated DNA sequencing. Genome Biol Evol. 7:706–719.
  • Leaché AD, Koo MS, Spencer CL, Papenfuss TJ, Fisher RN, McGuire JA. 2009. Quantifying ecological, morphological, and genetic variation to delimit species in the coast horned lizard species complex (Phrynosoma). Proc Natl Acad Sci USA. 106:12418–12423.
  • Li D, Liu CM, Luo R, Sadakane K, Lam TW. 2015. MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph. Bioinformatics. 31:1674–1676.
  • Nieto-Montes de Oca A, Arenas-Moreno D, Beltrán-Sanchez E, Leaché AD. 2014. A new species of horned lizard (genus Phrynosoma) from Guerrero, Mexico, with an updated multilocus phylogeny. Herpetologica. 70:241–257.
  • Reeder TW, Wiens JJ. 1996. Evolution of the lizard family phrynosomatidae as inferred from diverse types of data. Herpetol Mon. 10:43–84.
  • Wilgenbusch J, de Queiroz K. 2000. Phylogenetic relationships among the phrynosomatid sand lizards inferred from mitochondrial DNA sequences generated by heterogeneous evolutionary processes. Syst Biol. 49:592–612.

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