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Mitochondrial DNA Part B
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Volume 3, 2018 - Issue 1
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Mitogenome Announcement

Next-generation sequencing yields the complete chloroplast genome of C. goeringii acc. smg222 and phylogenetic analysis

Heng WangDepartment of Plant Bioscience, College of Natural Resources and Life Science, Pusan National University, Miryang, Republic of Korea; View further author information
,
So-Yeon ParkDepartment of Plant Bioscience, College of Natural Resources and Life Science, Pusan National University, Miryang, Republic of Korea; View further author information
,
Ah-Rim LeeDepartment of Plant Bioscience, College of Natural Resources and Life Science, Pusan National University, Miryang, Republic of Korea; View further author information
,
Seong-Gyu JangDepartment of Plant Bioscience, College of Natural Resources and Life Science, Pusan National University, Miryang, Republic of Korea; View further author information
,
Da-Eun ImDepartment of Plant Bioscience, College of Natural Resources and Life Science, Pusan National University, Miryang, Republic of Korea; View further author information
,
Tae-Hwan JunDepartment of Plant Bioscience, College of Natural Resources and Life Science, Pusan National University, Miryang, Republic of Korea; View further author information
,
Joohyun LeeDepartment of Applied Bioscience, Konkuk University, Seoul, Republic of Korea; View further author information
,
Jong-Wook ChungDepartment of Industrial Plant Science and Technology, Chungbuk National University, Cheongju, Republic of Korea; View further author information
,
Tae-Ho HamDepartment of Agricultural Science, Korea National Open University, Seoul, Republic of KoreaView further author information
&
Soon-Wook KwonDepartment of Plant Bioscience, College of Natural Resources and Life Science, Pusan National University, Miryang, Republic of Korea; Correspondence[email protected]
ORCID Iconhttp://orcid.org/0000-0002-6182-4383View further author information
ORCID Icon show all
Pages 215-216 | Received 16 Jan 2018, Accepted 01 Feb 2018, Published online: 12 Feb 2018

References

  • Chung JD, Chun CK, Kim SS, Lee JS. 1985. Factors affecting growth of rhizome and organogenesis of Korean native Cymbidium kanran. J Kor Soc Hortic Sci (Korea R.). 26:281–288.
  • Kumar S, Stecher G, Tamura K. 2016. MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datasets. Mol Biol Evol. 33:1870–1874.
  • Liu C, Shi L, Zhu Y, Chen H, Zhang J, Lin X, Guan X. 2012. CpGAVAS, an integrated web server for the annotation, visualization, analysis, and GenBank submission of completely sequenced chloroplast genome sequences. BMC Genomics. 13:715.
  • Liu X, Huang Y, Li F, Xu C, Chen K. 2014. Genetic diversity of 129 spring orchid (Cymbidium goeringii) cultivars and its relationship to horticultural types as assessed by EST-SSR markers. Sci Hortic. 174:178–184.
  • Obara-Okeyo P, Kako S. 1998. Genetic diversity and identification of Cymbidium cultivars as measured by random amplified polymorphic DNA (RAPD) markers. Euphytica. 99:95–101.
  • Parks M, Cronn R, Liston A. 2009. Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes. BMC Biol. 7:84.
  • Wang HZ, Wu ZX, Lu JJ, Shi NN, Zhao Y, Zhang ZT, Liu JJ. 2009. Molecular diversity and relationships among Cymbidium goeringii cultivars based on inter-simple sequence repeat (ISSR) markers. Genetica. 136:391–399.
  • Wyman SK, Jansen RK, Boore JL. 2004. Automatic annotation of organellar genomes with DOGMA. Bioinformatics. 20:3252–3255.
  • Yang JB, Tang M, Li HT, Zhang ZR, Li DZ. 2013. Complete chloroplast genome of the genus Cymbidium: lights into the species identification, phylogenetic implications and population genetic analyses. BMC Evol Biol. 13:84.

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