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Mito Communication

Species identification of juvenile fishes of the genus Pseudoblennius using mitochondrial DNA barcoding

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Pages 405-408 | Received 08 Mar 2018, Accepted 17 Mar 2018, Published online: 28 Mar 2018

References

  • Austen GE, Bindemann M, Griffiths RA, Roberts DL. 2016. Species identification by experts and non-experts: comparing images from field guides. Sci Rep. 6:33634.
  • Bhattacharya M, Sharma AR, Patra BC, Sharma G, Seo EM, Nam JS, Chakraborty C, Lee SS. 2016. DNA barcoding to fishes: current status and future directions. Mitochondrial DNA A DNA Mapp Seq Anal. 27:2744–2752.
  • Blaxter JHS. 1984. Ontogeny, systematic and fisheries. In: Moser HG, Richards WJ, Cohen DM, Fahay MP, Kendall Jr AW, Richardson SL, editors. Ontogeny and systematic of fishes based on an international symposium dedicated to the memory of Elbert Halvor Ahlstrom. Gainesville (FL): America Society of Ichthyologists and Herpetologists; p. 1–6.
  • Culverhouse PF, Williams R, Reguera B, Herry V, González-Gil S. 2003. Do experts make mistakes? A comparison of human and machine identification of dinoflagellates. Mar Ecol Prog Ser. 247:17–25.
  • Echmeyer WN, Fricke R, van der Laan R. 2017. Catalog of fishes: genera, species, references. San Francisco (CA): California Academy of Sciences; [accessed 2018 Jan 17]. http://researcharchive.calacademy.org/research/ichthyology/catalog/fishcatmain.asp
  • Günther A. 1861. Catalogue of the acanthopterygian fishes in the collection of the British Museum. Gobiidae, Discoboli, Pediculati, Blenniidae, Labyrinthici, Mugilidae, Notacanthi. London (UK): Order of the Trustees (Catalogue of the fishes in the British Museum; 3).
  • Hall TA. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser. 41:95–98.
  • Hastings PA, Walker HJ, Galland GR. 2014. Fishes: a guide to their diversity. Oakland (CA): University of California Press.
  • Hebert PD, Cywinska A, Ball SL, deWaard JR. 2003. Biological identifications through DNA barcodes. Proc Biol Sci. 270:313–321.
  • Hubert N, Delrieu-Trottin E, Irisson JO, Meyer C, Planes S. 2010. Identifying early stages of coral reef fishes through DNA barcoding: a test case with the families Acanthuridae and Holocentridae. Mol Phylogenet Evol. 55:1195–1203.
  • Hunt E. 2015. New Zealand hunters apologise over accidental shooting of takahē. The Guardian. Environment [about 3 screens]; [accessed 2018 Jan 15]. https://www.theguardian.com/environment/2015/aug/21/new-zealand-conservationists-apologise-over-accidental-shooting-of-endangered-takahe
  • Ji JM, Yu HJ, Hwang KS, Park JH, Lee JH, Kim JK. 2017. Molecular identification and morphological development of larvae of Psettina tosana collected from southern sea of Korea. Korean J Ichthyol. 29:244–251 (in Korean).
  • Jordan DS, Starks EC. 1904. A review of the Cottidae or sculpins found in the waters of Japan. Proc US Natl Mus. 27:231–335.
  • Kim IS, Choi Y, Lee CL, Lee YJ, Kim BJ, Kim JH. 2005. Illustrated book of Korean fishes. Seoul (KR): Kyo-Hak Publishing Co. (in Korean).
  • Kimura M. 1980. A simple method for estimating evolutionary rates of base substitutions though comparative studies of nucleotide sequences. J Mol Evol. 16:111–120.
  • Ko HL, Wang YT, Chiu TS, Lee MA, Leu MY, Chang KZ, Chen WY, Shao KT. 2013. Evaluating the accuracy of morphological identification of larval fishes by applying DNA barcoding. PLoS One. 8:e53451.
  • Kress WJ, García-Robledo C, Uriarte M, Erickson DL. 2015. DNA barcodes for ecology, evolution, and conservation. Trends Ecol Evol (Amst). 30:25–35.
  • Kumar S, Stecher G, Tamura K. 2016. MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol Evol. 33:1870–1874.
  • Leis JM, Carson-Ewart BM. 2000. The larvae of Indo-Pacific coastal fishes: an identification guide to marine fish larvae. Leiden (NL): Brill.
  • Matarese AC, Spies IB, Busby MS, Orr JW. 2011. Early larvae of Zesticelus profundorum (family Cottidae) identified using DNA barcoding. Ichthyol Res. 58:170–174.
  • Nakabo T, Kai Y. 2013. Cottidae. In: Nakabo T, editor. Fishes of Japan with pictorial keys to species. 3th ed. Tokyo (JP): Tokai University Press; p. 1160–1188 (in Japanese).
  • Nelson JS, Grande T, Wilson MVH. 2016. Fishes of the world. 5th ed. Hoboken (NJ): John Wiley and Sons Inc.
  • Okiyama M. 2014. An atlas of early stage fishes in Japan. 2nd ed. Hadano (JP): Tokai University Press (in Japanese).
  • Paine MA, McDowell JR, Graves JE. 2008. Specific identification using COI sequence analysis of scombrid larvae collected off the Kona coast of Hawaii Island. Ichthyol Res. 55:7–16.
  • Richardson J. 1848. Fishes. In: Adams, editor. The zoology of the voyage of H. M. S. Samarang; under the command of Captain Sir Edward Belcher, during the years 1843–1846. London (UK): Reeve and Benham; p. 1–28.
  • Steindachner F, Döderlein L. 1884. Beiträge zur Kenntniss der Fische Japan’s. Denkschr Kaiserl Akad Wiss Wien Math-Naturwiss Kl. 49:171–212.
  • Taylor CA, Watson W. 2004. Utility of larval pigmentation to identify nearchore rockfishes of the Sebastes subgenus pteropodus from southern California. CalCOFI Rep. 45:113–117.
  • Temminck CJ, Schlegel H. 1850. Pisces. In: de Siebold PF, editor. Fauna Japonica sive descriptio animalium, quae in itinere per Japoniam, jussu et auspiciis superiorum, qui summum in India Batava imperium tenent, suscepto, annis 1825–1830 collegit, notis, observationibus et adumbrationibus illustravit Ph. Fr. de Siebold. Conjunctis studiis C. J. Temminck et H. Schlegel pro vertebratis atque W. de Haan pro invertebratis elaborata. Leiden (NL): Lugduni Batavorum; p. 270–324.
  • Thompson JD, Higgins DG, Gibson TJ. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673–4680.
  • Victor BC. 2007. Coryphopterus kuna, a new goby (Perciformes: Gobiidae: Gobinae) from the western Caribbean, with the identification of the late larval stage and an estimate of the pelagic larval duration. Zootaxa. 1526:51–61.
  • Victor BC, Hanner R, Shivji M, Hyde J, Caldow C. 2009. Identification of the larval and juvenile stages of the cubera snapper, Lutjanus cyanopterus, using DNA barcoding. Zootaxa. 2215:24–36.
  • Ward RD, Zemlak TS, Innes BH, Last PR, Hebert PDN. 2005. DNA barcoding Australia’s fish species. Philos Trans R Soc Lond B Biol Sci. 360:1847–1857.
  • Yoo DJ, Han KH, Baek SR, Kim KS, Ha SC, Zang HC, Lee GS. 2003. Morphological development of eggs, larvae and juvenile of the sunrise sculpin, Pseudoblennius cottoides (Teleostei: Cottidae). J Kor Fish Soc. 36:263–269 (in Korean).