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Mitochondrial DNA Part B
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Volume 3, 2018 - Issue 2
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Mitogenome Announcement

Characterization of the complete mitochondrial genome of the lung fluke, Paragonimus heterotremus

Lei QianDepartment of medicine, Qingdao University, Shandong, Qingdao, China;
,
Ping ZhouThe Women and Children’s Hospital of Qingdao, Shandong, Qingdao, China;
,
Weilin LiThe Women and Children’s Hospital of Qingdao, Shandong, Qingdao, China;
,
Huaiping WangThe Affiliated Hospital of Medical College Qingdao University, Shandong, Qingdao, China
,
Tianjie MiaoDepartment of medicine, Qingdao University, Shandong, Qingdao, China;
&
Longgang HuThe Affiliated Hospital of Medical College Qingdao University, Shandong, Qingdao, ChinaCorrespondence[email protected]
Pages 560-561 | Received 14 Mar 2018, Accepted 03 Apr 2018, Published online: 11 May 2018

References

  • Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD. 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Computat Biol. 19:455–477.
  • Bi G, Mao Y, Xing Q, Cao M. 2018. HomBlocks: a multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching. Genomics. 110:18–22.
  • Castresana J. 2002. Gblocks, v. 0.91 b. online version. [accessed 2012 February 6]; Gblocks_ server. html. http://molevol.cmima.csic.es/castresana.
  • Hahn C, Bachmann L, Chevreux B. 2013. Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads—a baiting and iterative mapping approach. Nucleic Acids Res. 41:1–9.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30:772–780.
  • Lohse M, Drechsel O, Bock R. 2007. OrganellarGenomeDRAW (OGDRAW): a tool for the easy generation of high-quality custom graphical maps of plastid and mitochondrial genomes. Curr Genetics. 52:267–274.
  • Lowe TM, Eddy SR. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25:955–964.
  • Okonechnikov K, Golosova O, Fursov M. 2012. Unipro UGENE: a unified bioinformatics toolkit. Bioinformatics. 28:1166–1167.
  • Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP, et al. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol. 61:539–542.
  • Ruby JG, Bellare P, DeRisi JL. 2013. PRICE: software for the targeted assembly of components of (Meta) genomic sequence data. G3: Genes| Genomes| Genetics. 3:865–880.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30:1312–1313.
  • Wick RR. 2015. Bandage: interactive visualization of de novo genome assemblies. Bioinformatics. 31:3350–3352.

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