http://orcid.org/0000-0001-5770-412X
References
- Bailey CD, Koch MA, Mayer M, Mummenhoff K, O’Kane SL Jr, Warwick SI, Windham MD, Al-Shehbaz IA. 2006. Toward a global phylogeny of the Brassicaceae. Mol Biol Evol. 23:2142–2160.
- Beilstein MA, Nagalingum NS, Clements MD, Manchester SR, Mathews S. 2010. Dated molecular phylogenies indicate a Miocene origin for Arabidopsis thaliana. Proc Natl Acad Sci USA. 107:18724–18728.
- Couvreur TL, Franzke A, Al-Shehbaz IA, Bakker FT, Koch MA, Mummenhoff K. 2010. Molecular phylogenetics, temporal diversification, and principles of evolution in the mustard family (Brassicaceae). Mol Biol Evol. 27:55–71.
- German DA, Friesen N, Neuffer B, Al-Shehbaz I, Hurka H. 2009. Contribution to ITS phylogeny of the Brassicaceae, with special reference to some Asian taxa. Plant Syst Evol. 283:33–56.
- Grellet F, Delcasso-Tremousaygue D, Delseny M. 1989. Isolation and characterization of an unusual repeated sequence from the ribosomal intergenic spacer of the crucifer Sisymbrium irio. Plant Mol Biol. 12:695–706.
- Guo X, Liu J, Hao G, Zhang L, Mao K, Wang X, Zhang D, Ma T, Hu Q, Al-Shehbaz IA, Koch MA. 2017. Plastome phylogeny and early diversification of Brassicaceae. BMC Genomics. 18:176.
- Hall JC, Tisdale TE, Donohue K, Wheeler A, Al-Yahya MA, Kramer EM. 2011. Convergent evolution of a complex fruit structure in the tribe Brassiceae (Brassicaceae). Am J Bot. 98:1989–2003.
- Haudry A, Platts AE, Vello E, Hoen DR, Leclercq M, Williamson RJ, Forczek E, Joly-Lopez Z, Steffen JG, Hazzouri KM, et al. 2013. An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions. Nat Genet. 45:891–898.
- Huang CH, Sun R, Hu Y, Zeng L, Zhang N, Cai L, Zhang Q, Koch MA, Al-Shehbaz I, Edger PP, et al. 2016. Resolution of Brassicaceae phylogeny using nuclear genes uncovers nested radiations and supports convergent morphological evolution. Mol Biol Evol. 33:394–412.
- Kumar S, Stecher G, Tamura K. 2016. MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. Mol Biol Evol. 33:1870–1874.
- Langmead B, Salzberg SL. 2012. Fast gapped-read alignment with Bowtie 2. Nat Methods. 9:357–359.
- Okegawa Y, Motohashi K. 2015. Chloroplastic thioredoxin m functions as a major regulator of Calvin cycle enzymes during photosynthesis in vivo. Plant J. 84:900–913.
- Warwick SI, Mummenhoff K, Sauder CA, Koch MA, Al-Shehbaz IA. 2010. Closing the gaps: phylogenetic relationships in the Brassicaceae based on DNA sequence data of nuclear ribosomal ITS region. Plant Syst Evol. 285:209–232.
- Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821–829.