532
Views
1
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete mitogenome of Caridina indistincta ‘sp. A’ (Decapoda: Atyidae)

ORCID Icon
Pages 835-837 | Received 13 Apr 2018, Accepted 16 Apr 2018, Published online: 16 Aug 2018

References

  • Bernt M, Donath A, Juhling F, Externbrink F, Florentz C, Fritzsch G, Putz J, Middendorf M, Stadler PF. 2013. MITOS: Improved de novo metazoan mitochondrial genome annotation. Mol Phylogenet Evol. 69:313–319.
  • Dierckxsens N, Mardulyn P, Smits G. 2017. NOVOPlasty: de novo assembly of organelle genomes from whole genome data. Nucleic Acids Res. 45:e18.
  • Katoh K, Misawa K, Kuma K, Miyata T. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 30:3059–3066.
  • Page TJ, Choy SC, Hughes JM. 2005. The taxonomic feedback loop: symbiosis of morphology and molecules. Biol Lett. 1:139–142.
  • Page TJ, Hughes JM. 2007. Radically different scales of phylogeographic structuring within cryptic species of freshwater shrimp (Atyidae: Caridina). Limnol Oceanogr. 52:1055–1066.
  • Page TJ, Hughes JM. 2014. Contrasting insights provided by single and multispecies data in a regional comparative phylogeographic study. Biol J Linn Soc. 111:554–569.
  • Schmidt DJ, Brockett B, Espinoza T, Connell M, Hughes JM. 2016. Complete mitochondrial genome of the Endangered Mary River turtle (Elusor macrurus) and low mtDNA variation across the species’ range. Aust J Zool. 64:117–121.
  • Schmidt DJ, Islam MRU, Hughes JM. 2016. Complete mitogenomes for two lineages of the Australian smelt, Retropinna semoni (Osmeriformes: Retropinnidae). Mitochondrial DNA B Resour. 1:615–616.
  • Stamatakis A. 2006. RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics. 22:2688–2690.
  • Tan MH, Gan HM, Lee YP, Poore GCB, Austin CM. 2017. Digging deeper: new gene order rearrangements and distinct patterns of codons usage in mitochondrial genomes among shrimps from the Axiidea, Gebiidea and Caridea (Crustacea: Decapoda). PeerJ. 5:e2982.
  • Xu GC, Du FK, Nie ZJ, Xu P, Gu RB. 2016. Complete mitochondrial genome of Caridina nilotica gracilipes. Mitochondrial DNA Part A. 27:1249–1250.