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Mitogenome Announcement

The complete chloroplast genome sequence of Histiopteris incisa (Dennstaedtiaceae)

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Pages 772-773 | Received 29 May 2018, Accepted 18 Jun 2018, Published online: 11 Jul 2018

References

  • Andrews S. 2010. FastQC: a quality control tool for high throughput sequence data; [accessed 2017 Sep 2]. http://www.bioinformatics.babraham.ac.uk/projects/fastqc/.
  • Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 30:2114–2120.
  • Katoh K, Misawa K, Kuma K, Miyata T. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 30:3059–3066.
  • Schattner P, Brooks AN, Lowe TM. 2005. The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs. Nucleic Acids Res. 33:W686–W689.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30:1312–1313.
  • Wyman SK, Jansen RK, Boore JL. 2004. Automatic annotation of organellar genomes with DOGMA. Bioinformatics. 20:3252–3255.
  • Yan YH, Qi XP, Liao WB, Xing FW, Ding MY, Wang FG, Zhang XC, Wu ZH, Serizawa S, Prado J, et al. 2013. Dennstaedtiaceae. In: Wu ZY, Raven PH, Hong DY, eds., Flora of China. Vol. 2–3 (Pteridophytes). Beijing: Science Press; p. 147–168.
  • Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821–829.