Advanced search
Publication Cover
Mitochondrial DNA Part B
Resources
Volume 3, 2018 - Issue 2
Submit an article Journal homepage
646
Views
1
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete maternal mitochondrial genome sequences of two imperiled North American freshwater mussels: Alasmidonta heterodon and Alasmidonta varicosa (Bivalvia: Unionoida: Unionidae)

Aaron William AuninsNatural Systems Analysts, Under Contract to U.S. Geological Survey, U.S. Geological Survey Leetown Science Center, Kearneysville, WV, USA; Correspondence[email protected]
,
Cheryl L. MorrisonU.S. Geological Survey Leetown Science Center, Kearneysville, WV, USA;
,
Heather S. GalbraithNorthern Appalachian Research Laboratory, U.S. Geological Survey Leetown Science Center, Wellsboro, PA, USA
,
Michael S. EacklesU.S. Geological Survey Leetown Science Center, Kearneysville, WV, USA;
,
William B. SchillU.S. Geological Survey Leetown Science Center, Kearneysville, WV, USA;
&
Timothy L. KingU.S. Geological Survey Leetown Science Center, Kearneysville, WV, USA;
Pages 1124-1126 | Received 11 Jun 2018, Accepted 18 Jun 2018, Published online: 25 Oct 2018

References

  • Abascal F, Zardoya R, Telford MJ. 2010. TranslatorX: multiple alignment of nucleotide sequences guided by amino acid translations. Nucleic Acids Res. 38:W7–W13.
  • Bernt M, Donath A, Jühling F, Externbrink F, Florentz C, Fritzsch G, Pütz J, Middendorf M, Stadler PF. 2013. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol Phylogent Evol. 69:313–319.
  • Breton S, Beaupré HD, Stewart DT, Piontkivska H, Karmakar M, Bogan AE, Blier PU, Hoeh WR. 2009. Comparative mitochondrial genomics of freshwater mussels (Bivalvia: Unionoida) with doubly uniparental inheritance of mtDNA: gender-specific open reading frames and putative origins of replication. Genetics. 183:1575–1589.
  • Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32(5):1792–1797.
  • Guerra D, Plazzi F, Stewart DT, Bogan AE, Hoeh WR, Breton S. 2017. Evolution of sex-dependent mtDNA transmission in freshwater mussels (Bivalvia: Unionida). Sci Rep. 7:1551.
  • Hoang DT, Chernomor O, von Haeseler A, Minh BQ, Vinh LS. 2018. UFBoot2: improving the ultrafast bootstrap approximation. Mol Biol Evol. 35:518–522.
  • Lanfear R, Frandsen PB, Wright AM, Senfeld T, Calcott B. 2017. PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses. Mol Biol Evol. 34:772–773.
  • Lopes-Lima M, Froufe E, Do VT, Ghamizi M, Mock KE, Kebapci U, Klishko O, Kovitvadhi S, Kovitvadhi U, Paulo OS, et al. 2017. Phylogeny of the most species-rich freshwater bivalve family (Bivalvia: Unionida: Unionidae): defining modern subfamilies and tribes. Mol Phylogenet Evol. 106:174–191.
  • Lydeard C, Cowie RH, Ponder WF, Bogan AE, Bouchet P, Clark SA, Cummings KW, Frest TJ, Gargominy O, Herbert DG, et al. 2004. The global decline of nonmarine mollusks. BioScience. 54:321–330.
  • National Native Mussel Conservation Committee. 2016. A national strategy for the conservation of native freshwater mussels. FMBC. 19:1–21.
  • Nguyen LT, Schmidt HA, von Haeseler A, Minh BQ. 2015. IQ-Tree: a fast and effective stochastic algorithm for estimating maximum likelihood phylogenies. Mol Biol Evol. 32:268–274.
  • Saavedra C, Bachère E. 2006. Bivalve genomics. Aquaculture. 256:1–14.
  • Wyman SK, Jansen RK, Boore JL. 2004. Automatic annotation of organellar genomes with DOGMA. Bioinformatics. 20:3252–3255.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.