Advanced search
Publication Cover
Mitochondrial DNA Part B
Resources
Volume 3, 2018 - Issue 2
Submit an article Journal homepage
961
Views
9
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete chloroplast genome sequence of Korean Lonicera japonica and intra-species diversity

Shin-Jae KangDepartment of Plant Science, Plant Genomics and Breeding Institute, Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea; View further author information
,
Hyun-Seung ParkDepartment of Plant Science, Plant Genomics and Breeding Institute, Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea; View further author information
,
Hyun Jo KooDepartment of Plant Science, Plant Genomics and Breeding Institute, Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea; View further author information
,
Jee Young ParkDepartment of Plant Science, Plant Genomics and Breeding Institute, Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea; View further author information
,
Dong Young LeeCollege of Pharmacy and Research Institute of Pharmaceutical Science, Seoul National University, Seoul, Republic of Korea; View further author information
,
Kyo Bin KangCollege of Pharmacy and Research Institute of Pharmaceutical Science, Seoul National University, Seoul, Republic of Korea; View further author information
,
Sang Il HanMedicinal Plant Garden, College of Pharmacy, Seoul National University, Koyang, Republic of KoreaView further author information
,
Sang Hyun SungCollege of Pharmacy and Research Institute of Pharmaceutical Science, Seoul National University, Seoul, Republic of Korea; View further author information
&
Tae-Jin YangDepartment of Plant Science, Plant Genomics and Breeding Institute, Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea; Correspondence[email protected]
View further author information
 show all
Pages 941-942 | Received 06 Jul 2018, Accepted 08 Jul 2018, Published online: 23 Aug 2018

References

  • Allen G, Flores-Vergara M, Krasynanski S, Kumar S, Thompson W. 2006. A modified protocol for rapid DNA isolation from plant tissues using cetyltrimethylammonium bromide. Nat Protoc. 1:2320.
  • Chang WC, Hsu FL. 1992. Inhibition of platelet activation and endothelial cell injury by polyphenolic compounds isolated from Lonicera japonica Thunb. Prostaglandin Leukotriene Essent Fatty Acids. 45:307–312.
  • He L, Qian J, Li X, Sun Z, Xu X, Chen S. 2017. Complete chloroplast genome of medicinal plant lonicera japonica: genome rearrangement, intron gain and loss, and implications for phylogenetic studies. Molecules. 22:249.
  • Joh HJ, Kim NH, Jayakodi M, Jang W, Park JY, Kim YC, In JG, Yang TJ. 2017. Authentication of golden-berry P. ginseng cultivar ‘gumpoong’ from a landrace ‘hwangsook’ based on pooling method using chloroplast-derived markers. Plant Breed Biotechnol. 5:16–24.
  • Kim CK, Seol YJ, Perumal S, Lee J, Waminal NE, Jayakodi M, Lee SC, Jin S, Choi BS, Yu Y. 2018. Re-exploration of U’s triangle brassica species based on chloroplast genomes and 45S nrDNA sequences. Sci Rep. 8:7353.
  • Kim K, Lee S, Lee J, Yu Y, Yang Y, Choi B, Koh HJ, Waminal NE, Choi HI, Kim NH, et al. 2015a. Complete chloroplast ad ribosomal sequences for 30 accessions elucidate evolution of Oryza AA genome species. Sci Rep. 5:15655.
  • Kim K, Lee SC, Lee J, Lee HO, Joh HJ, Kim NH, Park HS, Yang TJ. 2015b. Comprehensive survey of genetic diversity in chloroplast genomes and 45S nrDNAs within Panax ginseng species. PLoS One. 10:e0117159.
  • Nguyen VB, Park HS, Lee SC, Lee J, Park JY, Yang TJ. 2017. Authentication markers for five major Panax species developed via comparative analysis of complete chloroplast genome sequences. J Agric Food Chem. 65: 6298–6306.
  • Nguyen, VB, Giang VNL, Waminal NE, Park HS, Kim NH, Jang W, Lee J, Yang TJ. 2018. Comprehensive comparative analysis of chloroplast genomes from seven Panax species and development of an authentication system based on species-unique SNP markers. J Ginseng Res.
  • Peng LY, Mei SX, Jiang B, Zhou H, Sun HD. 2000. Constituents from Lonicera japonica. Fitoterapia. 71:713–715.
  • Rutherford K, Parkhill J, Crook J, Horsnell T, Rice P, Rajandream MA, Barrell B. 2000. Artemis: sequence visualization and annotation. Bioinformatics. 16:944–945.
  • Shang X, Pan H, Li M, Miao X, Ding H. 2011. Lonicera japonica Thunb: ethnopharmacology, phytochemistry and pharmacology of an important traditional Chinese medicine. J Ethnopharmacol. 138:1–21.
  • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. 2013. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol. 30:2725–2729.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.