657
Views
2
CrossRef citations to date
0
Altmetric
Mtogenome Announcement

The complete chloroplast genome of Antiaris toxicaria, a medicinal and extremely toxic species

, , &
Pages 1100-1101 | Received 15 Jul 2018, Accepted 10 Aug 2018, Published online: 10 Sep 2018

References

  • Dierckxsens N, Mardulyn P, Smits G. 2017. Novoplasty: de novo assembly of organelle genomes from whole genome data. Nucleic Acid Res. 4(4):e18.
  • Huang DI, Cronk QCB. 2015. Plann: a command-line application for annotating plastome sequences. Appl Plant Sci. 3:1500026.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30:772–780.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28:1647–1649.
  • Li H. 2013. Aligning sequence reads. Clone Sequences and Assembly Contigs with Bwa-Mem. 1303. arXiv preprint arXiv:1303.3997.
  • Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R. 2009. The sequence alignment/map format and SAMtools. Bioinformatics. 25:2078–2079.
  • Luo R, Liu B, Xie Y, Li Z, Huang W, Yuan J, et al. 2012. Soapdenovo2: an empirically improved memory-efficient short-read de novo, assembler. Giga Sci. 1:1–6.
  • Ravi V, Khurana JP, Tyagi AK, Khurana P. 2006. The chloroplast genome of mulberry: complete nucleotide sequence, gene organization and comparative analysis. Tree Genet Genome. 3:49–59.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30:1312–1313.